AI787464 Marker Search Result - Rat Genome Database

Advanced Search (OLGA)

Symbol:

AI787464

Previously known as:

RGD ID:

5032395

Expected Size:

106 (bp)

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	71,406,200 - 71,406,306 (+)	MAPPER	mRatBN7.2
mRatBN7.2	1	195,875,222 - 195,875,328 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	213,546,690 - 213,546,795	NCBI	Rnor6.0
Rnor_6.0	10	73,903,154 - 73,903,259	NCBI	Rnor6.0
Rnor_5.0	10	76,196,123 - 76,196,228	UniSTS	Rnor5.0
Rnor_5.0	1	220,441,627 - 220,441,732	UniSTS	Rnor5.0
RGSC_v3.4	1	200,953,414 - 200,953,519	UniSTS	RGSC3.4
RGSC_v3.4	10	74,865,444 - 74,865,549	UniSTS	RGSC3.4
Celera	10	70,327,319 - 70,327,424	UniSTS
Celera	1	193,519,273 - 193,519,378	UniSTS
Cytogenetic Map	1	q41	UniSTS
Cytogenetic Map	10	q26	UniSTS

Is Marker For:

Genes: Vmp1 LOC682420 Vmp1-ps1 Mir21

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence

Region

Nucleotide Sequences


RefSeq Transcripts	NM_138839	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF411216	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AI787464	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC061721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220200	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220288	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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