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Gene: Ccl6 (chemokine (C-C motif) ligand 6) Rattus norvegicus
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Symbol: Ccl6
Name: chemokine (C-C motif) ligand 6
Description: Exhibits chemokine activity. Involved in cell chemotaxis. Predicted to localize to the extracellular space. Orthologous to human CCL23 (C-C motif chemokine ligand 23); PARTICIPATES IN chemokine mediated signaling pathway; INTERACTS WITH (RS)-amphetamine; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: C-C motif chemokine 6; chemokine ligand 6; Mrp-1; Scay6; small-inducible cytokine A6
Orthologs:
Homo sapiens (human) : CCL23 (C-C motif chemokine ligand 23)  HGNC  Alliance
Mus musculus (house mouse) : Ccl6 (chemokine (C-C motif) ligand 6)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : CCL23 (C-C motif chemokine ligand 23)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01070,798,118 - 70,802,750 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1070,797,124 - 70,802,782 (-)Ensembl
Rnor_5.01070,431,594 - 70,436,226 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41071,660,623 - 71,665,255 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11071,674,001 - 71,679,657 (-)NCBI
Celera1067,322,345 - 67,326,977 (-)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ccl6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303200
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.