Cm104 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Cm104 (Cardiac mass QTL 104) Rattus norvegicus

Symbol: Cm104
Name: Cardiac mass QTL 104
RGD ID: 12880053
Also known as: BpamC10QTL3; BpcakmC10QTL3
Trait: heart right ventricle mass   (VT:0007033)    
Measurement Type: heart right ventricle weight to body weight ratio   (CMO:0000914)    
LOD Score: Not Available
P Value: 0.009
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21073,452,992 - 83,463,334RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01075,983,662 - 86,419,171RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01074,127,825 - 86,215,106RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41077,091,834 - 87,272,656RGD_MAPPER_PIPELINERGSC3.4
Cross Type: Not Available
Strains Crossed: SS.LEW-(D10Rat27-Igfbp4)/Ayd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Duong C, etal., Mamm Genome. 2006 Dec;17(12):1147-61. Epub 2006 Dec 1.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
68408Lasp1LIM and SH3 protein 1108279517782835659Rat
61817Col1a1collagen type I alpha 1 chain107988362279900625Rat
3177Ngfrnerve growth factor receptor108051528780533518Rat
71101Abcc3ATP binding cassette subfamily C member 3107929668179342749Rat
619759Grb7growth factor receptor bound protein 7108344338783453057Rat
3276Pctpphosphatidylcholine transfer protein107480888774856260Rat
3322Phbprohibitin108060526880618043Rat
3361Pnmtphenylethanolamine-N-methyltransferase108338301983386557Rat
2709Gipgastric inhibitory polypeptide108096841080976506Rat
61875Psmb3proteasome 20S subunit beta 3108269742582704521Rat
620067Scpep1serine carboxypeptidase 1107370327573732892Rat
62067Rpl23ribosomal protein L23108277187882775840Rat
69428Pdk2pyruvate dehydrogenase kinase 2107997255079987074Rat
621456Pnpopyridoxamine 5'-phosphate oxidase108192458481930844Rat
708439Srcin1SRC kinase signaling inhibitor 1108251110182568706Rat
631328Tbkbp1TBK1 binding protein 1108212055882135749Rat
621859Ppp1r1bprotein phosphatase 1, regulatory (inhibitor) subunit 1B108334773183356775Rat
2909Kpnb1karyopherin subunit beta 1108214566282174437Rat
619962Npeppsaminopeptidase puromycin sensitive108219145482273967Rat
628842Tac4tachykinin precursor 4108020782480216156Rat
619765Xylt2xylosyltransferase 2107960591079619482Rat
621710Pip4k2bphosphatidylinositol-5-phosphate 4-kinase type 2 beta108270601682734938Rat
2336Chadchondroadherin107951217079515941Rat
727783Slc35b1solute carrier family 35, member B1108032792180335279Rat
621126Tob1transducer of ErbB-2.1107916309379165131Rat
61933Atp5mc1ATP synthase membrane subunit c locus 1108102405681026780Rat
621722Fbxl20F-box and leucine-rich repeat protein 20108308056883143680Rat
727791LOC257650hippyragranin108326733283280881Rat
620693Nxph3neurexophilin 3108045628380459949Rat
619877Nme2NME/NM23 nucleoside diphosphate kinase 2107889809778903600Rat
621111Cdk12cyclin-dependent kinase 12108320117783256906Rat
1304913Mrpl45mitochondrial ribosomal protein L45108230865082320474Rat
621183Rpl19ribosomal protein L19108302250383026030Rat
727966Kat7lysine acetyltransferase 7108022151980255590Rat
68382Cacnb1calcium voltage-gated channel auxiliary subunit beta 1108299818283018838Rat
3166Neurod2neuronal differentiation 2108332380183327986Rat
2561Erbb2erb-b2 receptor tyrosine kinase 2108341119783435078Rat
62031Coilcoilin107378907773810378Rat
632281Ppp1r9bprotein phosphatase 1, regulatory subunit 9B107993805579954085Rat
1304870RGD1304870similar to Tceb2 protein107374968573750358Rat
1304875Dlx3distal-less homeobox 3108006448980069891Rat
708436Skap1src kinase associated phosphoprotein 1108142547281732651Rat
620826Akap1A-kinase anchoring protein 1107362102173654123Rat
735087Spata20spermatogenesis associated 20107942752579435472Rat
1303311Lrrc46leucine rich repeat containing 46108202131482033575Rat
1306416Epn3epsin 3107943897879449516Rat
1305548Stac2SH3 and cysteine rich domain 2108303241783048260Rat
1305258Cwc25CWC25 spliceosome-associated protein homolog108273569882760373Rat
1307496Plxdc1plexin domain containing 1108292249982982124Rat
1305092Lrrc59leucine rich repeat containing 59107957229579586953Rat
1305097Pcgf2polycomb group ring finger 2108268256382694563Rat
1307319Snx11sorting nexin 11108174202081752778Rat
1307981Luc7l3LUC7-like 3 pre-mRNA splicing factor107924005079276555Rat
708580Igf2bp1insulin-like growth factor 2 mRNA binding protein 1108090830080951097Rat
1307024Ikzf3IKAROS family zinc finger 3108346056483553591Rat
1307720Socs7suppressor of cytokine signaling 7108235215982388829Rat
1306689Mllt6MLLT6, PHD finger containing108265725882678899Rat
1305361Wfikkn2WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2107918556379192719Rat
1307741Scrn2secernin 2108201660482020676Rat
3183Nognoggin107412871274130339Rat
1306768Sp6Sp6 transcription factor108200551882009699Rat
70497Nme1NME/NM23 nucleoside diphosphate kinase 1107890703678929659Rat
68942Cacna1gcalcium voltage-gated channel subunit alpha1 G107935499879422960Rat
1309090Mrpl27mitochondrial ribosomal protein L27107959545979601242Rat
1309742Arhgap23Rho GTPase activating protein 23108243757882496846Rat
1309141Osbpl7oxysterol binding protein-like 7108203599582053566Rat
1559720Cisd3CDGSH iron sulfur domain 3108267934582682376Rat
1310714Cbx1chromobox 1108177030781789981Rat
1310333Itga3integrin subunit alpha 3107999016080022206Rat
1311972Nfe2l1nuclear factor, erythroid 2-like 1108179605581812926Rat
1310780Hoxb3homeo box B3108125873981314134Rat
1311289Spag9sperm associated antigen 9107894343979077797Rat
1560397Msi2musashi RNA-binding protein 2107314376073510566Rat
1560541Tmem100transmembrane protein 100107485477974861147Rat
1309957Utp18UTP18 small subunit processome component107881187978839338Rat
1306682Mien1migration and invasion enhancer 1108343519883436491Rat
1308744Dlx4distal-less homeobox 4108008503780090434Rat
1309113Hoxb13homeo box B13108116049881162777Rat
1308264Tbx21T-box transcription factor 21108208232282098831Rat
1311613Spopspeckle type BTB/POZ protein108035812180438983Rat
1306182Phospho1phosphoethanolamine/phosphocholine phosphatase 1108076206280769596Rat
1310298Hoxb1homeo box B1108133150781332928Rat
1306948Copz2COPI coat complex subunit zeta 2108183244181845514Rat
1308347Ube2zubiquitin-conjugating enzyme E2Z108099781681016936Rat
1306138Samd14sterile alpha motif domain containing 14107995711179972347Rat
1308062Sgcasarcoglycan, alpha107990469879922813Rat
1307903Stxbp4syntaxin binding protein 4107530186875458741Rat
1306158Hoxb9homeo box B9108123731281240818Rat
1310144Snf8SNF8 subunit of ESCRT-II108098433780996724Rat
1562292Hoxb5homeo box B5108126937281271580Rat
1564031RGD1564031similar to transcription elongation factor B (SIII), polypeptide 2107376564173765970Rat
1311922Ttll6tubulin tyrosine ligase like 6108108198581118009Rat
1560033Gpr179G protein-coupled receptor 179108232456882340448Rat
1562656Acsf2acyl-CoA synthetase family member 2107950451079546714Rat
1559918Hoxb7homeo box B7108125261681256034Rat
620002Cdk5rap3CDK5 regulatory subunit associated protein 3108189439381903581Rat
1560914Dgkediacylglycerol kinase epsilon107385267973877334Rat
1562272RGD1562272similar to TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor107378128173783163Rat
1359123MycbpapMycbp associated protein107945031979470977Rat
1549768Stard3StAR-related lipid transfer domain containing 3108335732983379873Rat
1309067Eme1essential meiotic structure-specific endonuclease 1107958673679595515Rat
1559974Calcoco2calcium binding and coiled-coil domain 2108105546781069298Rat
1311794Abi3ABI family, member 3108076981980780816Rat
1560113Hoxb4homeo box B4108128455281287134Rat
1561062Fam117afamily with sequence similarity 117, member A108028140880325343Rat
1565395RGD1565395similar to stathmin 1/oncoprotein 18)108027404180274523Rat
1359248Kif2bkinesin family member 2B107639416076396379Rat
1587402LOC691189hypothetical protein LOC691189108276396982768587Rat
1587434Epopelongin BC and polycomb repressive complex 2 associated protein108262439282625912Rat
1563128Arl5cADP-ribosylation factor like GTPase 5C108298521382993425Rat
1566329Zfp652zinc finger protein 652108062655580706397Rat
1566089LOC303448similar to glyceraldehyde-3-phosphate dehydrogenase107596050775968953Rat
1559709Fbxo47F-box protein 47108284951482880337Rat
1563563RGD1563563similar to peptidylprolyl isomerase D107980080779804238Rat
1562142Hoxb6homeo box B6108125872681267458Rat
1562626Tom1l1target of myb1 like 1 membrane trafficking protein107546457775508304Rat
1559552Med1mediator complex subunit 1108314553883189260Rat
1582828HlfHLF transcription factor, PAR bZIP family member107515424475211884Rat
1592397Prr15lproline rich 15-like108191646081923092Rat
1592404LOC688156similar to ribosomal protein L15108083034580831058Rat
1592405B4galnt2beta-1,4-N-acetyl-galactosaminyl transferase 2108080159480828005Rat
1592414Rsad1radical S-adenosyl methionine domain containing 1107948525379499616Rat
1592386Pgap3post-GPI attachment to proteins phospholipase 3108338711383399357Rat
1592387Tcaptitin-cap108338171983382887Rat
1592078Sp2Sp2 transcription factor108194058081970548Rat
1592079Mmdmonocyte to macrophage differentiation-associated107507327875101528Rat
1592080LOC303431hypothetical LOC303431107368790473688917Rat
1592433LOC688126hypothetical protein LOC688126107389534373916133Rat
1591007Gngt2G protein subunit gamma transducin 2108077600380784235Rat
1586211Hoxb8homeo box B8108124831381251261Rat
1585185Hils1histone linker H1 domain, spermatid-specific 1107991352579914321Rat
1592427Mbtd1mbt domain containing 1107883914078895413Rat
1588626Mrpl10mitochondrial ribosomal protein L10108202603182034451Rat
1593405Tmem92transmembrane protein 92107974924279760807Rat
1594586LOC287625similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)107724356177246188Rat
1594396Trim25tripartite motif-containing 25107381281873831271Rat
1594678Ankrd40ankyrin repeat domain 40107928207579295322Rat
2319914LOC100361553hypothetical LOC100361553108098672680987180Rat
2319509Hoxb2homeobox B2108131792781320223Rat
2322220LOC100363835transcription elongation factor B (SIII), polypeptide 2-like107375751773758022Rat
2321564LOC100364194transmembrane protein 92-like107970720379710867Rat
2322930Car10carbonic anhydrase 10107805587578556490Rat
2322976LOC100363469ribosomal protein S24-like107628936576289879Rat
2323022LOC100363423rCG35357-like107550835475514764Rat
2325418Mir196cmicroRNA 196c108123100681231085Rat
2325564Mir152microRNA 152108183293681833020Rat
2325601Mir10amicroRNA 10a108128317181283280Rat
6489971LOC100911861transcription elongation factor B polypeptide 2-like107377428673774648Rat
6493616LOC100911361heterogeneous nuclear ribonucleoprotein A3-like107821773378219237Rat
7503123LOC102547047uncharacterized LOC102547047108069506780762037Rat
7497167LOC102555790uncharacterized LOC102555790107955293479561494Rat
7502415LOC102547753uncharacterized LOC102547753107412453474133881Rat
7503661LOC102557019uncharacterized LOC102557019107991863579929063Rat
7539176LOC102557607pulmonary surfactant-associated protein D-like108242847582437575Rat
7629087LOC102548607uncharacterized LOC102548607107565667275707890Rat
7660262LOC102546598uncharacterized LOC102546598108025568080267072Rat
7592610LOC102547278uncharacterized LOC102547278108196528481974238Rat
7607460LOC102555690uncharacterized LOC102555690107910421779113309Rat
7568369LOC102550580uncharacterized LOC102550580108130931081317103Rat
7691225LOC102548673uncharacterized LOC102548673107607484076093223Rat
7735698LOC102546674uncharacterized LOC102546674108026445580281943Rat
7736477Ankfn1ankyrin-repeat and fibronectin type III domain containing 1107421414374602825Rat
7694663LOC102556395uncharacterized LOC102556395107987220979881942Rat
7723636LOC102547955uncharacterized LOC102547955108193091281953864Rat
7668130LOC102546327uncharacterized LOC102546327108002225980027875Rat
7722794LOC102548674uncharacterized LOC102548674108306620983076178Rat
7703088LOC102548331uncharacterized LOC102548331108259315082599885Rat
7727790LOC102551165uncharacterized LOC102551165108153816281538800Rat
9174727Cox11cytochrome c oxidase copper chaperone COX11107545873575465322Rat
9277135LOC103693415uncharacterized LOC103693415107486760574896150Rat
9384463LOC103693449ATP synthase-coupling factor 6, mitochondrial pseudogene107862542278625920Rat
9338508LOC103693423transmembrane protein 92-like107976719279769848Rat
9447800LOC103693451transmembrane protein 92-like107973941479743041Rat
9417566LOC103693420thymosin beta-10 pseudogene107871166678711911Rat
10395317Hoxb5oshomeobox B5 and homeobox B6, opposite strand108125688081272747Rat
11370322LOC108352225uncharacterized LOC108352225107650095376507259Rat
11358390LOC108352211uncharacterized LOC108352211107946736679474311Rat
11433460LOC108352126dual specificity protein phosphatase 26 pseudogene108234532582347303Rat
11443179Trnac-gca36transfer RNA cysteine (anticodon GCA) 36108298388482983955Rat
11466692Trnan-guu10transfer RNA asparagine (anticodon GUU) 10108269643082696503Rat
11383644Trnac-gca35transfer RNA cysteine (anticodon GCA) 35108279438982794460Rat
11413531LOC108352121uncharacterized LOC108352121107817849178189087Rat
11395747LOC108352122uncharacterized LOC108352122107844915678475943Rat
11375592LOC108352184transmembrane protein 92-like107979551079799340Rat
11376555Trnac-gca34transfer RNA cysteine (anticodon GCA) 34108279267082792741Rat
11411023Trnac-gca37transfer RNA cysteine (anticodon GCA) 37108298455682984627Rat
11391314Trnac-gca33transfer RNA cysteine (anticodon GCA) 33108276266482762735Rat
11392345Trnaq-uug1transfer RNA glutamine (anticodon UUG) 1108079768580797756Rat
11383214LOC108352124uncharacterized LOC108352124108197872381985346Rat
41087387LOC120095288translation initiation factor IF-2-like108332702083328161Rat
41357294LOC120095456small nucleolar RNA SNORA17107560813475608254Rat
41114130NEWGENE_6576114transfer RNA threonine (anticodon AGU)108270538282705462Rat
41205404LOC120095284uncharacterized LOC120095284108135889981367940Rat
41325536LOC120095422small nucleolar RNA SNORA21108277511482775249Rat
41142250LOC120095279uncharacterized LOC120095279107935556979357242Rat
41252852LOC120095282tubulin polyglutamylase TTLL6-like108111951181127228Rat
41121724LOC120095173uncharacterized LOC120095173107401499674018744Rat
41393922Ebln1endogenous Bornavirus like nucleoprotein 1107893864578940651Rat
41098788LOC120095280uncharacterized LOC120095280107909155879095803Rat
41213596NEWGENE_40934091transfer RNA alanine (anticodon AGC)107558624175586315Rat
41100182LOC120095178uncharacterized LOC120095178108035416680357816Rat
41100961LOC120095358U6 spliceosomal RNA108342161083421716Rat
41123949LOC120095176uncharacterized LOC120095176107776432977775450Rat
41396154LOC120095345uncharacterized LOC120095345108011400880148484Rat
41070601Ankrd40clANKRD40 C-terminal like107922779179236365Rat
41197673LOC120095381U7 small nuclear RNA108286421882864279Rat
41163674LOC120095289uncharacterized LOC120095289108265989682662527Rat
41198723LOC120095179uncharacterized LOC120095179108063355380649436Rat
41295422LOC120095175uncharacterized LOC120095175107715506277216511Rat
41375225LOC120095466U6atac minor spliceosomal RNA107391064073910741Rat
41353348LOC120095285uncharacterized LOC120095285108136191881367401Rat
41202203LOC120095172uncharacterized LOC120095172107384653273852817Rat
41013792LOC120095287uncharacterized LOC120095287108182181381824811Rat
40953467LOC120095171uncharacterized LOC120095171107372350473725411Rat
40954811LOC120095180uncharacterized LOC120095180108084565680859083Rat
40957969LOC120095281uncharacterized LOC120095281107878300378789419Rat
40981583LOC120095439small nucleolar RNA SNORA48107787377177873910Rat
41003664LOC120095333L-lactate dehydrogenase A chain-like107756372577564800Rat
40987530LOC120095286uncharacterized LOC120095286108153147481538882Rat
41049107LOC120095177uncharacterized LOC120095177107998469279986134Rat
41220484LOC120095503U6 spliceosomal RNA107367788973677995Rat
41016400LOC120095290uncharacterized LOC120095290108334383383347667Rat
41039235LOC120095174uncharacterized LOC120095174107447460174484980Rat
41236916LOC120095411small nucleolar RNA SNORA4108038067580380818Rat
41238789LOC120095283uncharacterized LOC120095283108121741681229312Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10662D10Wox23108097644580976703Ratregion
10980D10Wox16127108051612580516250Ratregion
10981D10Arb21190108051614780516346Ratregion
10982D10Mit13166108051613480516299Ratregion
34274D10Mgh5227108256485682565079Ratregion
34695D10Mgh15105108340002583400128Ratregion
34718D10Mgh23231107889965578899894Ratregion
34718D10Mgh23231107889965578899805Ratregion
36073D10Rat22174108065573780655922Ratregion
36131D10Rat269145107555456175554705Ratregion
36203D10Rat27145107345299273453136Ratregion
36364D10Mit20247108129073481290981Ratregion
37460D10Rat93217107821039978210622Ratregion
35503D10Rat20123108067600080676123Ratregion
35513D10Rat24168107563188775632053Ratregion
35563D10Rat21133107981378979813922Ratregion
36878D10Rat219137107830688078307017Ratregion
37622D10Rat131202107373413573734359Ratregion
37894D10Rat114156107895264378952799Ratregion
37900D10Rat124205108170978881709989Ratregion
37996D10Rat127226108346311483463334Ratregion
39800D10Rat150202107839038778390589Ratregion
38286D10Rat112213107411896174119158Ratregion
38314D10Rat128182108118955381189735Ratregion
38314D10Rat128182108118946381189735Ratregion
38342D10Rat92180107458584674586024Ratregion
38516D10Rat106235108171463081714865Ratregion
39976D10Rat151209107481482074815039Ratregion
40038D10Rat147125107958411979584264Ratregion
39166D10Rat107110107917290779173029Ratregion
39226D10Rat86149107877551678775681Ratregion
39500D10Rat193228107357954173579767Ratregion
39538D10Rat191215108175463781754852Ratregion
41170D10Rat146249108007639080076653Ratregion
41328D10Rat148153108095664180956774Ratregion
40952D10Rat144142108253879082538938Ratregion
43612D3Got12221107843056678430787Ratregion
44775D10Got101211107467640974676620Ratregion
44776D10Got92148107437208474372232Ratregion
44778D10Got103248107539047475390722Ratregion
44779D10Got10798107512111775121215Ratregion
44781D10Got112125107624608576246212Ratregion
44782D10Got102116107581287375812988Ratregion
44783D10Got105227107857959778579824Ratregion
44784D10Got108171107908615679086329Ratregion
44785D10Got106122107838392478384046Ratregion
44787D10Got109198107924695279247150Ratregion
44790D10Got111260108030554780305807Ratregion
44792D10Got115225108068111980681344Ratregion
44794D10Got114204108146083181461035Ratregion
44795D10Got113219108097643980976660Ratregion
44797D10Got116154108067597180676125Ratregion
44798D10Got120169108212949482129663Ratregion
44799D10Got119202108191835181918574Ratregion
44802D10Got128244108300442583004668Ratregion
44803D10Got126167108333719983337366Ratregion
44804D10Got125254108321282883213078Ratregion
44805D10Got129151108307164383071794Ratregion
629588D10Hmgc1189108051612480516311Ratregion
59968D10Got122222108301691483017138Ratregion
66395D10Mco30294107388714873887455Ratregion
66396D10Mco31255108053697480537228Ratregion
66397D10Mco32191108256305882563249Ratregion
66398D10Mco34141108339968383399824Ratregion
66399D10Mco35390108205789882058275Ratregion
66400D10Mco36337108205377782054118Ratregion
66401D10Mco37204108205572182055925Ratregion
66404D10Mco41307108205724482057515Ratregion
66499D10Mco66204107846298478463164Ratregion
66583D10Mco30*257107388721373887482Ratregion
67317D10Arb10200108341096483411164Ratregion
67339D10Arb31108051602180516335Ratregion
1578817D10Chm112177107507480175074978Ratregion
1578820D10Chm117270107764676577647037Ratregion
1578854D10Chm104184107473665174736835Ratregion
1578863D10Chm111243107528932275289559Ratregion
1630856D10Got246299107730248177302780Ratregion
1578912D10Chm108235107507474375074978Ratregion
1578926D10Chm101245107498657474986819Ratregion
1578938D10Chm92232107525918875259416Ratregion
1578952D10Chm103250107513389675134148Ratregion
1578957D10Chm110226107525078975251017Ratregion
1578979D10Chm98219107484085874841077Ratregion
1579001D10Chm102183107508277875082963Ratregion
1579005D10Chm97194107481378074813976Ratregion
1579028D10Chm119235107669796776698202Ratregion
1579037D10Chm93249107527648775276736Ratregion
1579040D10Chm107250107478513774785387Ratregion
1579058D10Chm114159107510283075102989Ratregion
1579060D10Chm52200108128653081286765Ratregion
1579074D10Chm99234107488118374881419Ratregion
1579078D10Chm106211107477293874773149Ratregion
1579098D10Chm96250107475628574756535Ratregion
1579117D10Chm113246107509467675094922Ratregion
1579128D10Chm118205107714504877145255Ratregion
1579132D10Chm143219107804156678041799Ratregion
1579152D10Chm95250107516361875163868Ratregion
1579153D10Chm105215107475877274758987Ratregion
1579187D10Chm53230108129073281290981Ratregion
1627416D10Mco33189108256580082565989Ratregion
1627430Pdk2261107997280779973068Ratregion
1639543D10Got408163107611837876118541Ratregion
1641025D10Got215147107687498976875136Ratregion
1637393D10Got230187107372359873723784Ratregion
1637522D10Got225146107592578475925930Ratregion
1634171D10Wox29190108341097283411162Ratregion
1634227D10Wox53165107936154379361708Ratregion
7193101AA925269208107907746479077672Ratregion
7206324Hoxb1378108116074081160818Ratregion
7206326Hoxb275108131807581318150Ratregion
7206328Hoxb376108131064081310716Ratregion
7206330Hoxb4124108128478681284910Ratregion
7206332Hoxb5826108127000081270826Ratregion
7206334Hoxb695108126506081265155Ratregion
7206336Hoxb770108125266781252737Ratregion
7206340Hoxb8141108124890481249045Ratregion
7206342Hoxb9176108123731281237488Ratregion
5035953PMC316831P1212107412988074130092Ratregion
5035983PMC34669P1660107989819079898850Ratregion
5036101Cbx1176108178546181785638Ratregion
5036282Erbb2100108343350283433602Ratregion
5036320Gngt2204108078352280784077Ratregion
5036348Hoxb11337108133203681333373Ratregion
5039042RH127479192108268214282682334Ratregion
5039146RH127539218107530203875302256Ratregion
5031366PMC151926P1333107989913579899468Ratregion
5033929RH140651207107904488179045500Ratregion
5033933RH140667194107958649679586690Ratregion
5026016RH130586210108292251882922728Ratregion
5026240RH131452211107515437075154581Ratregion
5028877RH142665215108125169681251911Ratregion
5034243RH141905213107362108073621293Ratregion
5026416RH132128183108328054483280727Ratregion
5029053RH143339106108325474583254851Ratregion
5034375WI-7705334107515670775157041Ratregion
5029109RH143556286108269392182694207Ratregion
5031992AU046441115107686591276866022Ratregion
5029235RH144028111108195308481953195Ratregion
5035148BE096571170107536137075361540Ratregion
5029591BI277038174107960104279601216Ratregion
5027141RH66786158107412940674129564Ratregion
5032551D17S2026171108277193582772195Ratregion
5032647RH134777194108201070282010896Ratregion
5034962AI171993115107357052673570641Ratregion
5027363AI429575113107368816473688277Ratregion
5027435AW212678115108180051781800632Ratregion
5027439AI64652886108325419183254277Ratregion
5025092AW55414296107889460278894698Ratregion
5027673Nog361107412965174130012Ratregion
502787318.MMHAP86FRF9.seq156107812137078121526Ratregion
5033239RH138099223108178066381780886Ratregion
5030611BF398302198107888554378885741Ratregion
5033393RH138674240108194039281940632Ratregion
5025552RH128762183107378140173781584Ratregion
5033639RH139561194108214448682144680Ratregion
5030999BF405560178107993592879936106Ratregion
5033683RH139728208107530364975303857Ratregion
5033825RH140258189107960141679601605Ratregion
5055183RH143654172108219281582192987Ratregion
5051238RH134519206108249654682496752Ratregion
5056141RH144207134107387014673870280Ratregion
5053905RH142918108108284041882840526Ratregion
5054169RH143070122108267416482674286Ratregion
5057398AA925269122107907764379077765Ratregion
5057448AI030248213107960085179601064Ratregion
5055299RH143721190108216190582162095Ratregion
5059414AW524089193108130191781302110Ratregion
5059458AW530944166108208237182082537Ratregion
5058552BF393277243107915973779159980Ratregion
5056013RH144133103107363822473638327Ratregion
5058770BF387075159108251027382510474Ratregion
5056913RH144653150108276405182764201Ratregion
5058050BE101888181108063359180633772Ratregion
5052505AI117694107108174215481742261Ratregion
5052507AU040756237108335637583356612Ratregion
5052649RH142184172107935544779355620Ratregion
5052695RH142213163107480921774809379Ratregion
5052503AI194990251107889460278894853Ratregion
5053157RH142486111108217581082175921Ratregion
5053219RH142522266108179850081798766Ratregion
5054761RH143410131108274741082747542Ratregion
5041848RH129093215107480898074809195Ratregion
5041872RH129107220108314570383145923Ratregion
5044222RH130479185108335652083356705Ratregion
5043634RH130138220108189449481894714Ratregion
5043694RH130173180107935543779355617Ratregion
5045036RH130946218108061915880619376Ratregion
5045178RH131029184108184529781845481Ratregion
5045942RH131468199108308667183086870Ratregion
5041720RH129020165107924005279240217Ratregion
5044218RH130477220108131981781320037Ratregion
5044310RH130529201108270604182706242Ratregion
5046472RH131772202107990879879909221Ratregion
5047488RH132356219107991396779914186Ratregion
5045544RH131238188108194081381940999Ratregion
5047612RH132428211108203397082034181Ratregion
5047640RH132444187108303247083032657Ratregion
5049028RH133245188107551447675514664Ratregion
5049114RH133294184108283529182835493Ratregion
5048080RH132697195107551121475511409Ratregion
5048090RH132702183108222380682223989Ratregion
5049368RH133441197107948397379484170Ratregion
5049474RH133502193108076987780770070Ratregion
5047058RH132110161108250451182504672Ratregion
5048272RH132807203108080173680801939Ratregion
5048276RH132809217107385181373852030Ratregion
5048284RH132814185108277156982771754Ratregion
5047166RH132171201108192261281922813Ratregion
5039844RH127939206108102410581024585Ratregion
5041936RH129144149108192460081924749Ratregion
5040466RH128299188108212060082120787Ratregion
5039908RH127977206108338719983387405Ratregion
5042316RH129364150108308072683080876Ratregion
5042548RH129500193108268264482682837Ratregion
5043334RH129966206108262361982623825Ratregion
7192198Hoxb6105108126716481267269Ratregion
5040432RH128280217107990037079900613Ratregion
5040620RH128387181107364298673643167Ratregion
5041368RH128817215107380489173805106Ratregion
5074940RH138307122107541439475414516Ratregion
5072774RH137045218108277162382771841Ratregion
5072792RH137056187108099651380996700Ratregion
5074500RH138053144108127173781271881Ratregion
5074536RH138073213108179673081796943Ratregion
5079404RH140976217107353704573537262Ratregion
5076624RH139284134107485735974857493Ratregion
5077306RH139680190108192203881922228Ratregion
5077894RH140021203107385565773855860Ratregion
5077970RH140066195108214371182143906Ratregion
5077638RH139871185107948994179490126Ratregion
5077898RH140024181107906570679065887Ratregion
5077976RH140070208107485996374860171Ratregion
5079908RH141272192108179084381791035Ratregion
5079982RH141314182107997273879973312Ratregion
5080116RH141392197108214559882145795Ratregion
5079166RH140774154108314727083147424Ratregion
5070716RH134663183108045548680455669Ratregion
5070720RH134665213108232211582322328Ratregion
5073056RH137211182108202046582020647Ratregion
5070922RH134783187107902681679027003Ratregion
5073594RH137526121107935544279355563Ratregion
5071606RH135179200107890255378902753Ratregion
5070904RH134773220108266024582660465Ratregion
5073180RH137286184108090230080902484Ratregion
5071876RH135336209108002598380026192Ratregion
5071380RH135048188108345282183453009Ratregion
5072296RH13676790107929671579296805Ratregion
5071882RH135339205108179044781790652Ratregion
5061832AW533789174108195785681958030Ratregion
5063382BF398818247108299682582997072Ratregion
5065046BE108995164107347188673472050Ratregion
5063482BF398908162107910871279108874Ratregion
5067078AU047978166108198529381985459Ratregion
5067356AU047804200108198529381985493Ratregion
5067414AU047764280108118490981185191Ratregion
5067414AU047764280108118490981185056Ratregion
5067414AU047764280108118418781185191Ratregion
5069706AU046324176107451311774513293Ratregion
5062214BE106331161108308261683082777Ratregion
5062236BI288522174108343497383435147Ratregion
5060754BF389090201107885527378855474Ratregion
5064126BE120636189107519939675199585Ratregion
5060270AI713654234108269491382695147Ratregion
5060462BE098192174107935705179357225Ratregion
5060652BE104182159108043875180438910Ratregion
5062210BF397575177108130267681302853Ratregion
5063974BE120353208107516484675165054Ratregion
5062490BE106740171107991158779911758Ratregion
5062702BF403890206107851795678518160Ratregion
5062742AW534168152108051656480516716Ratregion
5061172AW526629179108174339381743572Ratregion
5063012BI295735185108315088583151070Ratregion
5064646BF411411154107949571079495863Ratregion
5066286PMC137013P2203108002891180029114Ratregion
5061422BF396384177108274941282749589Ratregion
5061464BE105239199107924666479247408Ratregion
5061506BE105346150108327719383277343Ratregion
5066444AU048353187108169391681694104Ratregion
5066482AU04833085108049098280491067Ratregion
5084084AI40834590107546594575466035Ratregion
5086915BE106746169108338635583386524Ratregion
5086977BQ193432185108329714983297334Ratregion
5087030AA818722196108032502780325223Ratregion
5087096BQ208348162107910179679101958Ratregion
5087510PMC213492P1303108208355582083858Ratregion
5086477AA955814151108268364382683794Ratregion
5082723BG373921142107909558179095723Ratregion
5087528PMC275467P3261107988305779883318Ratregion
5087885PMC26408P2763108097434080975103Ratregion
5087939Hoxb6128108126716781267295Ratregion
5088014PMC26408P1160108052396880524128Ratregion
5083451BI282209199108102411281024585Ratregion
5083595BI27637090108090811780908207Ratregion
5088325AU048502210107415416874154380Ratregion
5088855AU048810157107384390673844065Ratregion
5081671BE117971166108131289481313060Ratregion
5081765AW434650170108076942380769593Ratregion
5087554PMC312758P3120107890332478903444Ratregion
5084968AI10444690107907506679075156Ratregion
5087937Hoxb3404108131051281310916Ratregion
5081000RH141906200108070609880706298Ratregion
5090523AU049802200107460808474608284Ratregion
5081338UniSTS:225862162108126720481267366Ratregion
5085651BQ203205171108116306981163240Ratregion
5090057AU049524187108221657482216763Ratregion
5084532AI013877174108007304780073221Ratregion
5084718AI008253116108133373681333852Ratregion
5086272AA850065206108249654782496753Ratregion
5084982AI010027133107950455379504686Ratregion
5081452AI556399219107960603879606257Ratregion
5081525BE117171177107994413079944307Ratregion
5083587BE100739175107906603579066209Ratregion
5085816BF388159178107881249178812669Ratregion
5083751AI231151198107530581875306016Ratregion
5083775AA892263109108125279281252901Ratregion
5083966AI408016104107377444073774544Ratregion
5502866Dlx3621108006806980068691Ratregion
5503101CACNB1493108300195783002450Ratregion
5503390SSO4H11183108102416081024617Ratregion
5503587UniSTS:464682121108051730680517427Ratregion
5503682EME1__75830107958669979587365Ratregion
5504778PMC99823P1341108006795580068296Ratregion
5505806UniSTS:495034812107412934374130155Ratregion
5505676UniSTS:489090699107412939174130090Ratregion
5506459GDB:3755021419107584471375845132Ratregion
5506559NEUROD2_1374819108332480083325619Ratregion
5506706G38056199108128265581282854Ratregion
5506610NOG_2549691107412904474129735Ratregion
5507205UniSTS:225255178108214633082146508Ratregion
5499571AI987680119108077025680770750Ratregion
5499681G73122764108300647583007239Ratregion
5500949MARC_9787-9788:996688611:1156108041697280417655Ratregion
5501009PMC117285P1922108133179081332712Ratregion
5501630UniSTS:265259350108127155081271900Ratregion
5502182MARC_7915-7916:996688163:1166107997350079974187Ratregion
5502748COL1A1166107989533679895601Ratregion
5500573RH136041193108181204481812237Ratregion
5500743RH65642299108189858981899299Ratregion
5500853GDB:45852791406108231961482321020Ratregion
5501015PMC122806P1618108208571182086329Ratregion
5503486GRB7_4323464108345255883453022Ratregion
5501642UniSTS:265422522107412939474129916Ratregion
5504434PMC20354P1597108008600680086603Ratregion
5504791UniSTS:2741841463108180281981804282Ratregion
5501369STS-H47054129108214755282148946Ratregion
5501880MARC_16741-16742:1020435796:1690107946199379462683Ratregion
5506187UniSTS:498743790108091239080913180Ratregion
5502851Car10724107855521878555942Ratregion
Position Markers

Flank 1: (D10Rat27)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21073,452,992 - 73,453,136 (+)MAPPER
Rnor_6.01075,983,662 - 75,983,805NCBI
Rnor_5.01074,127,825 - 74,127,968UniSTS
RGSC_v3.41077,091,892 - 77,092,035UniSTS
RGSC_v3.41077,091,834 - 77,092,169RGD
RGSC_v3.11077,106,262 - 77,106,405RGD
Celera1072,360,629 - 72,360,772UniSTS
RH 3.4 Map10681.99RGD
RH 3.4 Map10681.99UniSTS
RH 2.0 Map10766.2RGD
SHRSP x BN Map1050.9999RGD
FHH x ACI Map1059.2399RGD
Cytogenetic Map10q26UniSTS
Flank 2: (D10Rat127)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21083,463,114 - 83,463,334 (+)MAPPER
Rnor_6.01086,418,952 - 86,419,171NCBI
Rnor_5.01086,214,887 - 86,215,106UniSTS
RGSC_v3.41087,272,312 - 87,272,656RGD
RGSC_v3.41087,272,421 - 87,272,640UniSTS
RGSC_v3.11087,286,791 - 87,287,010RGD
Celera1082,210,794 - 82,211,013UniSTS
RH 3.4 Map10846.4UniSTS
RH 3.4 Map10846.4RGD
RH 2.0 Map10953.8RGD
SHRSP x BN Map1061.96RGD
FHH x ACI Map1070.3099RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10615418273453136Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10635789696121100Rat
2303118Mamtr7Mammary tumor resistance QTL 70.003mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)109658275104670812Rat
2301967Cm73Cardiac mass QTL 734.55heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)101448701189062041Rat
631268Cia21Collagen induced arthritis QTL 213.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1014487011104060283Rat
2316949Gluco60Glucose level QTL 603.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1014487011107057807Rat
1554317Bmd4Bone mineral density QTL 49.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)101981604299406971Rat
724556Pur2Proteinuria QTL 25.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)102242750090627625Rat
61354Pia10Pristane induced arthritis QTL 100.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
631267Cia20Collagen induced arthritis QTL 203.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
61325Aia5Adjuvant induced arthritis QTL 50.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
1298069Bp168Blood pressure QTL 1685.5blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)102652195798003205Rat
631542Bp82Blood pressure QTL 826.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)102652195798952741Rat
724527Bp148Blood pressure QTL 1480.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102845313673453136Rat
1331791Cm31Cardiac mass QTL 313.84606heart mass (VT:0007028)heart wet weight (CMO:0000069)1029299504107211142Rat
631557Bp136Blood pressure QTL 1360.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)103063205375632053Rat
1576311Pia26Pristane induced arthritis QTL 26joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)103122402675632053Rat
1578779Tcas10Tongue tumor susceptibility QTL 103.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)103129743976297439Rat
1576319Cia29Collagen induced arthritis QTL 29joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)103397392178973921Rat
2317042Aia20Adjuvant induced arthritis QTL 203.38joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)103756507982565079Rat
2317043Aia7Adjuvant induced arthritis QTL 73.82joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)103756507982565079Rat
1576308Schws1Schwannoma susceptibility QTL 10.0041nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)1040035094102359817Rat
631269Cia22Collagen induced arthritis QTL 228.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040035094104060283Rat
631270Cia23Collagen induced arthritis QTL 233.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040035094104060283Rat
631552Vetf2Vascular elastic tissue fragility QTL 24.50.0002aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)104114263386142633Rat
61463Bp12Blood pressure QTL 126.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104133325886333258Rat
8552805Bw145Body weight QTL 1452.2body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)104194452678307017Rat
1298078Stresp5Stress response QTL 52.990.00025blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1042045676104670812Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)14232313287323132Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)14232313287323132Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)14232313287323132Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)14232313287323132Rat
70198BpQTLcluster9Blood pressure QTL cluster 92.94arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)104232313287323132Rat
6893342Cm78Cardiac mass QTL 780.10.88heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)104287676679813922Rat
9589030Epfw9Epididymal fat weight QTL 919.240.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)104444169989441699Rat
7411614Foco18Food consumption QTL 180.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)104444169989441699Rat
8694173Bw149Body weight QTL 1494.380.001body mass (VT:0001259)body weight gain (CMO:0000420)104444169989441699Rat
2300218Hpcl2Hepatic cholesterol level QTL 2liver cholesterol amount (VT:0010498)liver cholesterol level (CMO:0001597)104502965095600334Rat
631547Bp87Blood pressure QTL 874.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104736947092369470Rat
2293705Bmd25Bone mineral density QTL 257.10.0001femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)104944455181709989Rat
7207811Bmd90Bone mineral density QTL 905.2femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)104944455181709989Rat
2293652Bmd22Bone mineral density QTL 224.90.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)104944455181709989Rat
2293669Bmd33Bone mineral density QTL 334.50.0001femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)104944455181709989Rat
2293679Bmd30Bone mineral density QTL 303.50.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)104944455181709989Rat
1549846Scl47Serum cholesterol level QTL 473.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)105057470795574707Rat
70364Bp72Blood pressure QTL 72arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)105112110096121100Rat
61387Bp1Blood pressure QTL 15.1arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1051770177107211142Rat
61387Bp1Blood pressure QTL 15.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1051770177107211142Rat
1359017Hrtrt21Heart rate QTL 212.4heart pumping trait (VT:2000009)heart rate (CMO:0000002)105177294096772940Rat
631530Tls3T-lymphoma susceptibility QTL 300.0001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)105177461295600334Rat
631535Cm51Cardiac mass QTL 513heart mass (VT:0007028)calculated heart weight (CMO:0000073)105178628291669536Rat
70171Cari1Carrageenan-induced inflammation QTL 14.90.0005hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)1053797385107211142Rat
70164Bw21Body weight QTL 214.360.00005body mass (VT:0001259)body weight (CMO:0000012)105379749498952626Rat
1354608Cm33Cardiac mass QTL 332.8heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)105480929299809292Rat
2312662Slep8Serum leptin concentration QTL 80.05blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1057134272102134272Rat
2312668Scl65Serum cholesterol level QTL 650.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1057134272102134272Rat
2312672Insul15Insulin level QTL 150.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1057134272102134272Rat
1549831Bss6Bone structure and strength QTL 64lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)1057576521102576521Rat
2293698Bss43Bone structure and strength QTL 435.330.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1059209888104209888Rat
70363Bp71Blood pressure QTL 710.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)106134527681714865Rat
2306970Anxrr22Anxiety related response QTL 225.95fear/anxiety-related behavior trait (VT:1000241)number of periods of voluntary immobility (CMO:0001045)106134527698211570Rat
6893336Cm75Cardiac mass QTL 750.10.87heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)106134527699703528Rat
1558643Cm44Cardiac mass QTL 444.80.0000368heart mass (VT:0007028)heart wet weight (CMO:0000069)106134527699703528Rat
61402Niddm3Non-insulin dependent diabetes mellitus QTL 34.58blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)106134541382564856Rat
2313103Bss80Bone structure and strength QTL 8020.0001tibia strength trait (VT:1000284)tibia midshaft endosteal cross-sectional area (CMO:0001716)1062057807107057807Rat
2313105Bss79Bone structure and strength QTL 791.80.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)1062057807107057807Rat
61449Ciaa2CIA Autoantibody QTL 27.1blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)1063221094107211142Rat
2298481Eau9Experimental allergic uveoretinitis QTL 90.0169uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)106592723382565079Rat
1357344Bp249Blood pressure QTL 2490.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)106674365598003205Rat
631565Hcuc4Hepatic copper content QTL 44.15hepatic copper amount (VT:0003065)liver copper weight to liver dry weight ratio (CMO:0001512)106694181373452992Rat
2317029Aia19Adjuvant induced arthritis QTL 192.98joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)1066978955107211142Rat
2317039Aia6Adjuvant induced arthritis QTL 64.31joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)1066978955107211142Rat
2289985Bp305Blood pressure QTL 305arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)106750210873579767Rat
10450498Bp384Blood pressure QTL 3840.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1067750049107211142Rat
1642980Bp300Blood pressure QTL 300arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1068383129107211142Rat
61396Bp9Blood pressure QTL 94.80.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1068420376107211142Rat
2300172Bmd57Bone mineral density QTL 579.80.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1069738412107211142Rat
2293646Bss25Bone structure and strength QTL 2510.960.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1069738412107211142Rat
2293663Bss33Bone structure and strength QTL 339.340.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1069738412107211142Rat
6893366Bw106Body weight QTL 1060.30.47body mass (VT:0001259)body weight (CMO:0000012)1070199100107211142Rat
70193Mcs7Mammary carcinoma susceptibility QTL 72.38mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1072224939107211142Rat
2298548Neuinf7Neuroinflammation QTL 73.4nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)1072224939107211142Rat
2306793Ean5Experimental allergic neuritis QTL 54.7nervous system integrity trait (VT:0010566)IFNG-secreting splenocyte count (CMO:0002122)107255241693995749Rat
2289982Bp303Blood pressure QTL 303arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)107345299275632053Rat
724555Bp150Blood pressure QTL 1500.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)107345299278210622Rat
12880053Cm104Cardiac mass QTL 1040.009heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)107345299283463334Rat
1358188Ept9Estrogen-induced pituitary tumorigenesis QTL 93.9pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)107345313696120911Rat
2292617Ept18Estrogen-induced pituitary tumorigenesis QTL 183.9pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)107345313696120911Rat
2289983Bp304Blood pressure QTL 304arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)107357954174119158Rat
12880050Am10Aortic mass QTL 100.016aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)107437208484007272Rat
1579919Bp281Blood pressure QTL 2810.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)107437208494965338Rat
631537Oia4Oil induced arthritis QTL 4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)107563188787055282Rat
2325836Bp346Blood pressure QTL 3460.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)107624608584007272Rat
10450495Bp383Blood pressure QTL 3830.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)107624608594965338Rat
2292438Bp311Blood pressure QTL 311arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1076246085107211142Rat
1302404Cia27Collagen induced arthritis QTL 272.60.0045joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)1076452683107211142Rat
4889492Pancm2Pancreatic morphology QTL 23.2pancreatic beta cell morphology trait (VT:0005217)ratio of insulin-positive cell area to total area of splenic region of pancreas (CMO:0001814)1076748906107211142Rat
724516Uae17Urinary albumin excretion QTL 173.6urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)107821062285220348Rat
1300107Rf18Renal function QTL 183.41urine output (VT:0003620)timed urine volume (CMO:0000260)107877551698279596Rat
1358915Stresp7Stress response QTL 73.52blood norepinephrine amount (VT:0005663)plasma norepinephrine level (CMO:0001010)107889965587307728Rat
634354Rends3Renal damage susceptibility QTL 30.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)107981378985160854Rat
631555Bp134Blood pressure QTL 1340.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)108051528791230079Rat
6893357Bw102Body weight QTL 1020.50.36body mass (VT:0001259)body weight (CMO:0000012)1080515287101325465Rat
2303589Bw87Body weight QTL 872body mass (VT:0001259)body weight (CMO:0000012)1081285008107211142Rat
4889948Bss91Bone structure and strength QTL 914tibia area (VT:1000281)tibia midshaft total cross-sectional area (CMO:0001715)108256485692369470Rat
2317754Glom25Glomerulus QTL 253.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)1082685200107211142Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 7 gender: male 1599557
qtl_general also affects aortic mass and blood pressure, but not heart left ventricle mass, body mass or kidney mass 1599557
qtl_statistics_details software package used: ANOVA followed by Dunnett test in the SYSTAT 9 program 1599557
qtl_trait_method measurement method: selected males were weaned at 21 days of age then fed 2% NaCl diet starting from 35 days of age, at 14 weeks animals were decapitated, organs removed, blotted and weighed 1599557
qtl_trait_method heart was dissected into left ventricle plus septum and right ventricle 1599557