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Gene: Supt4h1 (SPT4 homolog, DSIF elongation factor subunit) Rattus norvegicus
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Symbol: Supt4h1
Name: SPT4 homolog, DSIF elongation factor subunit
RGD ID: 1306372
Description: Predicted to have RNA polymerase II complex binding activity and protein heterodimerization activity. Predicted to be involved in RNA metabolic process; chromatin organization; and regulation of transcription, DNA-templated. Predicted to localize to DSIF complex. Orthologous to human SUPT4H1 (SPT4 homolog, DSIF elongation factor subunit); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; amphetamine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC287608; MGC188814; suppressor of Ty 4 homolog 1; suppressor of Ty 4 homolog 1 (S. cerevisiae); suppressor of Ty 4 homolog 2; suppressor of Ty 4 homolog 2 (S. cerevisiae); Supt4h2; transcription elongation factor SPT4
Orthologs:
Homo sapiens (human) : SUPT4H1 (SPT4 homolog, DSIF elongation factor subunit)  HGNC  Alliance
Mus musculus (house mouse) : Supt4a (SPT4A, DSIF elongation factor subunit)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Supt4h1 (SPT4 homolog, DSIF elongation factor subunit)
Pan paniscus (bonobo/pygmy chimpanzee) : SUPT4H1 (SPT4 homolog, DSIF elongation factor subunit)
Canis lupus familiaris (dog) : SUPT4H1 (SPT4 homolog, DSIF elongation factor subunit)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Supt4h1 (SPT4 homolog, DSIF elongation factor subunit)
Sus scrofa (pig) : SUPT4H1 (SPT4 homolog, DSIF elongation factor subunit)
Chlorocebus sabaeus (African green monkey) : SUPT4H1 (SPT4 homolog, DSIF elongation factor subunit)
Heterocephalus glaber (naked mole-rat) : Supt4h1 (SPT4 homolog, DSIF elongation factor subunit)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01075,032,365 - 75,038,547 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1075,032,365 - 75,038,547 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01075,063,841 - 75,070,023 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41076,030,806 - 76,036,988 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11076,045,182 - 76,051,065 (+)NCBI
Celera1071,452,699 - 71,458,881 (+)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Supt4h1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306372
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.