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Gene: Tubd1 (tubulin, delta 1) Rattus norvegicus
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Symbol: Tubd1
Name: tubulin, delta 1
Description: Predicted to have GTPase activity. Predicted to be involved in positive regulation of smoothened signaling pathway. Predicted to localize to the cytosol and nucleoplasm. Orthologous to human TUBD1 (tubulin delta 1); INTERACTS WITH (RS)-amphetamine; bisphenol A; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC287592; tubulin delta chain; tubulin, delta 1-like
Orthologs:
Homo sapiens (human) : TUBD1 (tubulin delta 1)  HGNC  Alliance
Mus musculus (house mouse) : Tubd1 (tubulin, delta 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tubd1 (tubulin delta 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TUBD1 (tubulin delta 1)
Canis lupus familiaris (dog) : TUBD1 (tubulin delta 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tubd1 (tubulin delta 1)
Sus scrofa (pig) : TUBD1 (tubulin delta 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01073,865,828 - 73,886,976 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01076,212,408 - 76,234,012 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41076,698,128 - 76,744,225 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11076,716,013 - 76,758,595 (+)NCBI
Celera1070,290,053 - 70,311,138 (+)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tubd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311967
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.