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Gene: Zbtb48 (zinc finger and BTB domain containing 48) Rattus norvegicus
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Symbol: Zbtb48
Name: zinc finger and BTB domain containing 48
Description: Predicted to have double-stranded telomeric DNA binding activity; identical protein binding activity; and transcription regulatory region DNA binding activity. Predicted to be involved in positive regulation of transcription, DNA-templated and telomere maintenance via telomere lengthening. Predicted to localize to the chromosome, telomeric region; cytosol; and nucleoplasm. Orthologous to human ZBTB48 (zinc finger and BTB domain containing 48); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: GLI-Kruppel family member HKR3; Hkr3; LOC362668; MGC108933; zinc finger and BTB domain-containing protein 48
Orthologs:
Homo sapiens (human) : ZBTB48 (zinc finger and BTB domain containing 48)  HGNC  Alliance
Mus musculus (house mouse) : Zbtb48 (zinc finger and BTB domain containing 48)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Zbtb48 (zinc finger and BTB domain containing 48)
Pan paniscus (bonobo/pygmy chimpanzee) : ZBTB48 (zinc finger and BTB domain containing 48)
Canis lupus familiaris (dog) : ZBTB48 (zinc finger and BTB domain containing 48)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Zbtb48 (zinc finger and BTB domain containing 48)
Sus scrofa (pig) : ZBTB48 (zinc finger and BTB domain containing 48)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05169,191,771 - 169,200,140 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5169,191,753 - 169,200,109 (-)Ensembl
Rnor_5.05172,750,034 - 172,758,396 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45169,247,667 - 169,255,998 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15169,257,855 - 169,266,187 (-)NCBI
Celera5160,758,007 - 160,766,255 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Zbtb48
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311581
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.