Neuinf1 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL Registration

QTL: Neuinf1 (Neuroinflammation QTL 1) Rattus norvegicus

Symbol: Neuinf1
Name: Neuroinflammation QTL 1
RGD ID: 1549904
Also known as: Vra3
Trait: nervous system integrity trait   (VT:0010566)    
Measurement Type: blood T lymphocyte count   (CMO:0000110)    
LOD Score: 3.0
P Value: 0.0
Variance: Not Available
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.05161,084,664 - 173,707,219RGD_MAPPER_PIPELINERnor6.0
Rnor_5.05164,789,054 - 177,180,328RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.45161,449,395 - 173,096,209RGDRGSC3.4
RGSC_v3.15161,459,512 - 173,106,704RGD
Cross Type: Not Available
Strains Crossed: PVG/OlaHsd DA/Ztm 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Vertebrate Trait

Rat Strain
DA/Ztm  (IEA)
PVG/OlaHsd  (IEA)

References

References - curated
1. Lidman O, etal., J Neurosci 2003 Oct 29;23(30):9817-23.
2. Olsson T, etal., J Neurol Sci 2005 Jun 15;233(1-2):99-108.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1359147Kaznkazrin, periplakin interacting protein5160637235161730513Rat
7709749LOC102554076uncharacterized LOC1025540765161251174161257997Rat
1585610LOC683584similar to POU domain, class 5, transcription factor 1-like protein 35161374587161376388Rat
2324336LOC100362622sorting nexin 18-like5161402889161404861Rat
7556798LOC102556543uncharacterized LOC1025565435161436069161448069Rat
1560231RGD1560231similar to 60S ribosomal protein L115161723868161724841Rat
1594531Prdm2PR/SET domain 25161769587161879150Rat
9275519LOC103692503uncharacterized LOC1036925035161773906161788542Rat
2324274LOC100362684ribosomal protein S20-like5161889229161889746Rat
1587379LOC298611alpha-tubulin pseudogene and flanks5161924553161926288Rat
61819Pdpnpodoplanin5161947137161981441Rat
11357843LOC108351056uncharacterized LOC1083510565162029410162032327Rat
1311416Lrrc38leucine rich repeat containing 385162031722162053723Rat
7570163LOC102555587uncharacterized LOC1025555875162104142162109315Rat
9319280LOC103692518PRAME family member 18-like5162127625162130686Rat
7556152LOC102555984uncharacterized LOC1025559845162133656162138397Rat
1588644Pramef27PRAME family member 275162158000162165475Rat
1564061Pramef8PRAME family member 85162183397162197119Rat
1565680Oog1oogenesin 15162243154162249128Rat
6487785LOC100912329ubiquitin-conjugating enzyme E2 H-like5162254946162256688Rat
1563257Aadacl3arylacetamide deacetylase-like 35162323373162332014Rat
1587426LOC691162hypothetical protein LOC6911625162351021162369987Rat
7240728LOC101241876ubiquitin-conjugating enzyme E2H pseudogene5162358110162359852Rat
1587431Pramef12PRAME family member 125162378442162388786Rat
1587437Pramef20PRAME family member 205162406599162411066Rat
1561813Pramef25PRAME family member 255162414706162416952Rat
1587447Pramef17PRAME family member 175162439717162443016Rat
1584908LOC366497similar to pyruvate kinase 35162479317162484699Rat
1593379Rps4x-ps4ribosomal protein S4, X-linked, pseudogene 45162482855162483749Rat
1308878RGD1308878similar to arylacetamide deacetylase5162506652162516264Rat
1563334RGD1563334similar to novel protein similar to esterases5162593460162602329Rat
1565761Aadacl4arylacetamide deacetylase-like 45162676109162688907Rat
1559644RGD1559644similar to novel protein similar to esterases5162727638162751145Rat
7688236LOC102550246uncharacterized LOC1025502465162805112162808303Rat
1305584Dhrs3dehydrogenase/reductase 35162809090162843385Rat
1308403Vps13dvacuolar protein sorting 13 homolog D5162891451163119239Rat
7497539LOC10255680460S ribosomal protein L36-like5163119247163124894Rat
621238Tnfrsf1bTNF receptor superfamily member 1B5163136390163167299Rat
3879Tnfrsf8TNF receptor superfamily member 85163186349163231578Rat
2319953LOC100361514hypothetical LOC1003615145163310412163325960Rat
9212267LOC103690344zinc finger protein 501-like5163352299163359795Rat
6501160LOC100909858zinc finger protein 845-like5163362475163367181Rat
7623967LOC102551014zinc finger protein 624-like5163506732163530630Rat
7603077LOC102550823casein kinase I isoform gamma-3-like5163543347163545451Rat
1586278LOC691228similar to reduced expression 25163547938163679841Rat
7547575LOC102550754uncharacterized LOC1025507545163558565163559387Rat
2319680LOC100361693zinc finger protein 53-like5163576463163596466Rat
9214635LOC10369528260S ribosomal protein L9 pseudogene5163612540163613135Rat
6500378LOC100910043casein kinase I isoform gamma-3-like5163692540163694644Rat
6500535LOC100910080casein kinase I isoform gamma-3-like5163697068163698479Rat
6500161LOC100910117zinc finger protein 765-like5163701171163715234Rat
7694630LOC102551209uncharacterized LOC1025512095163712051163712873Rat
2319112LOC100361968Zfp758 protein-like5163735536163757167Rat
9461644LOC10369251960S ribosomal protein L9 pseudogene5163773531163774208Rat
6484979LOC100912971zinc finger protein 808-like5163826654163845675Rat
6499833LOC100910191casein kinase I isoform gamma-3-like5163847881163849418Rat
6499450LOC100910223zinc finger protein 761-like5163867920163901028Rat
7614436LOC102551478zinc finger protein 347-like5163901453163902875Rat
9101500LOC103692505uncharacterized LOC1036925055163933296163940524Rat
9425811LOC103692504uncharacterized LOC1036925045163963076163990403Rat
1586256LOC691254hypothetical protein LOC6912545164031215164110413Rat
9133338LOC103692506uncharacterized LOC1036925065164076581164084113Rat
1586245LOC691266similar to casein kinase 1, gamma 15164213774164215378Rat
1586249Rex2reduced expression 25164222515164235267Rat
9203001LOC103692507uncharacterized LOC1036925075164238193164240357Rat
1625998Vom2r-ps78vomeronasal 2 receptor, pseudogene 785164282149164282352Rat
2318719LOC100362164casein kinase 1, gamma 3-like5164311466164314345Rat
1598209LOC500584similar to casein kinase 1, gamma 3 isoform 25164316029164361225Rat
2318582LOC100362203Predicted gene, OTTMUSG00000010965-like5164391831164392507Rat
11425502LOC108351057uncharacterized LOC1083510575164393934164410220Rat
7532802LOC102552821zinc finger protein 2 homolog5164419299164420518Rat
1565622RGD1565622RGD15656225164419299164425034Rat
1561413RGD1561413similar to BC021442 protein5164496684164547343Rat
9321252LOC103692508malate dehydrogenase, mitochondrial pseudogene5164502396164511863Rat
6492682LOC100911456migration and invasion-inhibitory protein-like5164548657164555842Rat
6492845LOC100911485mitofusin-2-like5164560437164586254Rat
1586231LOC691280similar to Zinc finger protein 180 (HHZ168)5164644438164665455Rat
1587376Miipmigration and invasion inhibitory protein5164672464164679503Rat
628843Mfn2mitofusin 25164684244164715414Rat
621382Plod1procollagen-lysine, 2-oxoglutarate 5-dioxygenase 15164720629164747071Rat
1305350RGD1305350similar to RIKEN cDNA 2510039O185164751413164757680Rat
3194Nppbnatriuretic peptide B5164796176164797538Rat
3193Nppanatriuretic peptide A5164808407164809716Rat
1305379Clcn6chloride voltage-gated channel 65164811815164844554Rat
1309952Mthfrmethylenetetrahydrofolate reductase5164844642164864360Rat
9312074LOC103692509NHP2-like protein 1 pseudogene5164864885164866713Rat
7658417LOC102551309uncharacterized LOC1025513095164875558164885606Rat
1359346Agtrapangiotensin II receptor-associated protein5164888069164898387Rat
7646732LOC102551534uncharacterized LOC1025515345164898531164902797Rat
7635238LOC102551596uncharacterized LOC1025515965164907768164908206Rat
1585098Draxindorsal inhibitory axon guidance protein5164913085164943012Rat
11399174LOC10835105860S ribosomal protein L35a pseudogene5164923228164923678Rat
1307499Mad2l2mitotic arrest deficient 2 like 25164943183164956255Rat
620418Fbxo6F-box protein 65164956285164962075Rat
1562463Fbxo44F-box protein 445164962921164972273Rat
621751Fbxo2F-box protein 25164972483164977912Rat
11370875LOC108351059uncharacterized LOC1083510595165022252165027934Rat
1305820Disp3dispatched RND transporter family member 35165051522165099826Rat
11463859LOC108351060uncharacterized LOC1083510605165122632165136171Rat
7568401LOC102551951uncharacterized LOC1025519515165169281165192499Rat
1309588Ubiad1UbiA prenyltransferase domain containing 15165247630165259228Rat
68371Mtormechanistic target of rapamycin kinase5165263813165373967Rat
7553363Angptl7angiopoietin like 75165311794165318361Rat
1593248Exosc10exosome component 105165374964165398195Rat
7530545LOC10255221240S ribosomal protein S2-like5165384632165385917Rat
620796Srmspermidine synthase5165405168165408325Rat
620214Masp2mannan-binding lectin serine peptidase 25165415105165429857Rat
1310906TardbpTAR DNA binding protein5165432089165442232Rat
1583785LOC366502hypothetical gene supported by NM_0229495165463273165464011Rat
1585063LOC691354hypothetical protein LOC6913545165464832165491375Rat
9103835LOC103692510uncharacterized LOC1036925105165559735165562108Rat
1585054LOC691363hypothetical protein LOC6913635165573320165573677Rat
1563533Casz1castor zinc finger 15165625119165777053Rat
9140801LOC103692511uncharacterized LOC1036925115165731734165740119Rat
68336Pex14peroxisomal biogenesis factor 145165782895165918445Rat
620334DffaDNA fragmentation factor subunit alpha5165922893165935822Rat
2383Cortcortistatin5165942780165944221Rat
7730210LOC102553292putative uncharacterized protein YIL169C-like5165944683165945663Rat
5128728Cenpscentromere protein S5165946106165955723Rat
1583832Pgdphosphogluconate dehydrogenase5165966128165982327Rat
621520Kif1bkinesin family member 1B5165994803166133497Rat
7740951LOC102547502uncharacterized LOC1025475025166138681166142982Rat
9378858LOC103690193uncharacterized LOC1036901935166141254166142982Rat
1304738Ube4bubiquitination factor E4B5166156033166259069Rat
9393794LOC103692512uncharacterized LOC1036925125166275112166276938Rat
1562168Rbp7retinol binding protein 75166278214166282832Rat
1587396LOC691196similar to arylacetamide deacetylase5166293476166335979Rat
1310996Nmnat1nicotinamide nucleotide adenylyltransferase 15166409460166430291Rat
9341305LOC103692520uncharacterized LOC1036925205166430099166432027Rat
1309253Lzicleucine zipper and CTNNBIP1 domain containing5166430305166443485Rat
1562749Ctnnbip1catenin, beta-interacting protein 15166464170166513030Rat
9153855LOC103692513uncharacterized LOC1036925135166514351166524490Rat
1306458Clstn1calsyntenin 15166533262166601686Rat
1310990Pik3cdphosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta5166602053166628028Rat
1583947Tmem201transmembrane protein 2015166672700166695288Rat
1583942Slc25a33solute carrier family 25 member 335166701463166726794Rat
7665827LOC102548220uncharacterized LOC1025482205166731267166734162Rat
11081182LOC10012536640S ribosomal protein S25166864178166872132Rat
7685779LOC102548366uncharacterized LOC1025483665166888814166891407Rat
1309319Spsb1splA/ryanodine receptor domain and SOCS box containing 15166913734166978534Rat
11369953LOC108351061uncharacterized LOC1083510615166980913166984343Rat
1306562H6pdhexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)5166994683167030441Rat
11477533LOC108351062uncharacterized LOC1083510625167037525167054705Rat
9106117LOC103692514uncharacterized LOC1036925145167056426167086851Rat
2325584Mir34amicroRNA 34a5167092491167092592Rat
1311096Gpr157G protein-coupled receptor 1575167109691167125380Rat
68328Slc2a5solute carrier family 2 member 55167142182167174203Rat
9467056LOC103692515uncharacterized LOC1036925155167165003167169991Rat
1583902Slc2a7solute carrier family 2 member 75167195981167211613Rat
70516Ca6carbonic anhydrase 65167226246167244786Rat
11477874LOC108351063uncharacterized LOC1083510635167267927167270543Rat
7540943LOC102548845uncharacterized LOC1025488455167268923167270719Rat
2553Eno1enolase 15167288223167299610Rat
629475Rerearginine-glutamic acid dipeptide repeats5167330966167664506Rat
9210669LOC103692516uncharacterized LOC1036925165167340656167342934Rat
11484356LOC108351064small nuclear ribonucleoprotein G pseudogene5167373925167374737Rat
7489027Mir6332microRNA 63325167402968167403088Rat
11382308LOC108351072LYR motif-containing protein 1-like5167552301167557016Rat
708502Slc45a1solute carrier family 45, member 15167672134167696331Rat
11410862Trnas-aga3transfer RNA serine (anticodon AGA) 35167789003167789074Rat
11393480LOC108351065uncharacterized LOC1083510655167831382167840242Rat
7562865LOC102556220uncharacterized LOC1025562205167927329167937374Rat
1307599Errfi1ERBB receptor feedback inhibitor 15167951564167966011Rat
7515381LOC102556316uncharacterized LOC1025563165167965950167970127Rat
621808Park7Parkinsonism associated deglycase5167982438168004724Rat
1598208Tnfrsf9TNF receptor superfamily member 95168009245168035813Rat
7752004LOC102556501uncharacterized LOC1025565015168054654168060351Rat
3930Uts2urotensin 25168078748168084133Rat
621581Per3period circadian regulator 35168088126168123482Rat
61880Vamp3vesicle-associated membrane protein 35168126157168136628Rat
1562703Camta1calmodulin binding transcription activator 15168138207169017295Rat
7637163LOC102546456uncharacterized LOC1025464565168478063168479859Rat
9287277LOC103692521extensin-like5168522330168526484Rat
7585927LOC102546564uncharacterized LOC1025465645168536440168547815Rat
7618904LOC102546752oocyte-expressed protein homolog5168843479168846802Rat
9217812LOC103692522uncharacterized LOC1036925225168891275168896391Rat
9441276LOC103692523uncharacterized LOC1036925235168947715168951930Rat
2323948LOC100362830ribosomal protein S7-like5169021517169022178Rat
7740098LOC102549990glyceraldehyde-3-phosphate dehydrogenase-like5169031829169042231Rat
1307731Dnajc11DnaJ heat shock protein family (Hsp40) member C115169109907169154725Rat
1308109Thap3THAP domain containing 35169155239169160987Rat
1308145Phf13PHD finger protein 135169161412169167831Rat
1305863Klhl21kelch-like family member 215169181418169190073Rat
1311581Zbtb48zinc finger and BTB domain containing 485169191771169200140Rat
61891Tas1r1taste 1 receptor member 15169200389169212113Rat
1566167Nol9nucleolar protein 95169213076169233173Rat
1303132Plekhg5pleckstrin homology and RhoGEF domain containing G55169244778169288310Rat
1598206Tnfrsf25TNF receptor superfamily member 255169288419169293137Rat
620652Espnespin5169293356169331338Rat
1582748LOC691566similar to mitochondrial carrier homolog 15169333975169334486Rat
62082Hes2hes family bHLH transcription factor 25169338097169339142Rat
628856Acot7acyl-CoA thioesterase 75169357582169450215Rat
1564170Gpr153G protein-coupled receptor 1535169450275169463878Rat
621339Hes3hes family bHLH transcription factor 35169463196169469795Rat
621618Icmtisoprenylcysteine carboxyl methyltransferase5169475270169482031Rat
1586262Rnf207ring finger protein 2075169486253169500451Rat
621189Rpl22ribosomal protein L225169506150169512875Rat
1582725Chd5chromodomain helicase DNA binding protein 55169519212169572059Rat
61828Kcnab2potassium voltage-gated channel subfamily A regulatory beta subunit 25169570327169658875Rat
1565070LOC500594LRRGT001625169632527169637356Rat
1560172Nphp4nephrocystin 45169647581169744662Rat
7592969LOC102549399uncharacterized LOC1025493995169937602169949713Rat
7559930LOC102549463uncharacterized LOC1025494635170052486170063858Rat
9419525LOC103690216uncharacterized LOC1036902165170055130170063834Rat
1583705LOC503006similar to 40S ribosomal protein S15 (RIG protein)5170224795170225226Rat
7567711LOC102550429uncharacterized LOC1025504295170595691170606694Rat
1590138Ajap1adherens junctions associated protein 15170615885170679315Rat
7751891LOC102551503uncharacterized LOC1025515035171220104171230257Rat
9186615LOC103692524uncharacterized LOC1036925245171236043171245180Rat
1304567RGD1304567similar to RIKEN cDNA A430005L145171242899171247344Rat
620335DffbDNA fragmentation factor subunit beta5171250559171261875Rat
708505Cep104centrosomal protein 1045171262278171294560Rat
1308599Lrrc47leucine rich repeat containing 475171297850171307682Rat
1564257Smim1small integral membrane protein 1 (Vel blood group)5171306836171312109Rat
1587099Ccdc27coiled-coil domain containing 275171312790171327581Rat
7631678LOC102551562uncharacterized LOC1025515625171327670171358374Rat
1307083Tp73tumor protein p735171355876171415354Rat
1359137Wrap73WD repeat containing, antisense to TP735171441471171455795Rat
1590079Tprg1ltumor protein p63 regulated 1-like5171456299171459488Rat
6492904LOC100911486multiple epidermal growth factor-like domains protein 6-like5171478247171571810Rat
11412313LOC10835106660S ribosomal protein L24 pseudogene5171520492171525573Rat
621188Megf6multiple EGF-like-domains 65171588901171620947Rat
1588981Arhgef16Rho guanine nucleotide exchange factor 165171626450171649124Rat
2324431Prdm16PR/SET domain 165171662277171711561Rat
9327793LOC103692529PR domain zinc finger protein 16-like5171809884171936476Rat
7704566LOC102555433uncharacterized LOC1025554335171912022171914917Rat
1359657Actrt2actin-related protein T25172077290172078690Rat
7643067LOC102555491uncharacterized LOC1025554915172139210172143941Rat
1304840Ttc34tetratricopeptide repeat domain 345172253257172271056Rat
1309299Mmel1membrane metallo-endopeptidase-like 15172273450172303905Rat
1308251Prxl2bperoxiredoxin like 2B5172304799172307402Rat
9190664LOC103692525uncharacterized LOC1036925255172326426172327296Rat
1310115Tnfrsf14TNF receptor superfamily member 145172328259172337221Rat
621340Hes5hes family bHLH transcription factor 55172364421172365188Rat
628857Pank4pantothenate kinase 45172367593172384077Rat
1304675Plch2phospholipase C, eta 25172386400172455965Rat
1591776Pex10peroxisomal biogenesis factor 105172469978172475144Rat
1306324Rer1retention in endoplasmic reticulum sorting receptor 15172476746172488822Rat
1359433Morn1MORN repeat containing 15172489160172547102Rat
11448041LOC108351067uncharacterized LOC1083510675172519551172528225Rat
1565591SkiSKI proto-oncogene5172556196172623878Rat
9262356LOC103692526uncharacterized LOC1036925265172631716172638148Rat
1308923Faap20FA core complex associated protein 205172648171172655576Rat
3399Prkczprotein kinase C, zeta5172658071172769492Rat
7499193LOC102546418phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like5172772616172773050Rat
61901Gabrdgamma-aminobutyric acid type A receptor subunit delta5172797478172809374Rat
2324110Cfap74cilia and flagella associated protein 745172817221172884996Rat
2318502Tmem52transmembrane protein 525172887587172889349Rat
2718Gnb1G protein subunit beta 15172914025172981403Rat
1642420NadkNAD kinase5172984930173015505Rat
1597193Atp5h-ps1ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, pseudogene 15173003500173004091Rat
1309076Slc35e2bsolute carrier family 35, member E2B5173024335173050228Rat
628604Cdk11bcyclin-dependent kinase 11B5173051900173078049Rat
11489274LOC10835107360S ribosomal protein L27a pseudogene5173072608173073884Rat
620201Mmp23matrix metallopeptidase 235173078811173082834Rat
1359469Mib2MIB E3 ubiquitin protein ligase 25173082943173099353Rat
1583706LOC503002similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)5173103979173115605Rat
11375690LOC108348319uncharacterized LOC1083483195173138920173141564Rat
1589420Fndc10fibronectin type III domain containing 105173139345173141564Rat
2321567LOC100364191hCG1994130-like5173148837173149319Rat
1307854Ssu72SSU72 homolog, RNA polymerase II CTD phosphatase5173152964173182720Rat
9363343LOC103692527uncharacterized LOC1036925275173153313173155898Rat
2318117Tmem240transmembrane protein 2405173182815173189683Rat
1305964Atad3aATPase family, AAA domain containing 3A5173189590173209809Rat
7575268LOC102547290uncharacterized LOC1025472905173209910173210879Rat
1311476Vwa1von Willebrand factor A domain containing 15173216737173221923Rat
1588243Tmem88btransmembrane protein 88B5173230364173233188Rat
1588232Ankrd65ankyrin repeat domain 655173237642173239899Rat
1588219Mrpl20mitochondrial ribosomal protein L205173248245173252775Rat
1309149Ccnl2cyclin L25173256301173268279Rat
1303211Aurkaip1aurora kinase A interacting protein 15173274433173276170Rat
1359356Mxra8matrix remodeling associated 85173288200173292926Rat
620632Dvl1dishevelled segment polarity protein 15173295948173308014Rat
620539Tas1r3taste 1 receptor member 35173307325173312950Rat
1359656Cptpceramide-1-phosphate transfer protein5173314219173318384Rat
1306841Ints11integrator complex subunit 115173318435173336930Rat
1559560Pusl1pseudouridine synthase like 15173326755173339934Rat
1310711Acap3ArfGAP with coiled-coil, ankyrin repeat and PH domains 35173340060173354756Rat
1359523Ube2j2ubiquitin-conjugating enzyme E2, J25173372659173387084Rat
1307059C1qtnf12C1q and TNF related 125173390901173395276Rat
1309558B3galt6Beta-1,3-galactosyltransferase 65173423475173425611Rat
621521Sdf4stromal cell derived factor 45173425922173444478Rat
3920Tnfrsf4TNF receptor superfamily member 45173447784173450474Rat
1565872Tnfrsf18TNF receptor superfamily member 185173459371173463980Rat
1560839Ttll10tubulin tyrosine ligase like 105173471020173517783Rat
10059730LOC106182250uncharacterized LOC1061822505173487137173494502Rat
2325537Mir429microRNA 4295173488331173488415Rat
4888608Mir3548microRNA 35485173489353173489472Rat
2325426Mir200amicroRNA 200a5173489366173489454Rat
2325552Mir200bmicroRNA 200b5173490144173490238Rat
1311517RGD1311517similar to RIKEN cDNA 9430015G105173542058173559761Rat
1587009Rnf223ring finger protein 2235173561016173566844Rat
2323751LOC100362942hypothetical LOC1003629425173581324173587152Rat
2067Agrnagrin5173589910173622813Rat
1310312Isg15ISG15 ubiquitin-like modifier5173624862173629124Rat
1304931Perm1PPARGC1 and ESRR induced regulator, muscle 15173640780173646073Rat
1311019Plekhn1pleckstrin homology domain containing N15173646055173654140Rat
708444Klhl17kelch-like family member 175173654238173659706Rat
1309387Noc2lNOC2-like nucleolar associated transcriptional repressor5173659796173672699Rat
1310271Samd11sterile alpha motif domain containing 115173672413173689360Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11001D5Wox101615164807242164807402Ratregion
11002D5Mit151405164809772164809913Ratregion
34206D5Mgh151595167739539167739697Ratregion
34248D5Mgh91375172402477172402610Ratregion
34467D5Mgh161295167946000167946134Ratregion
36207D5Rat471215162817289162817407Ratregion
36237D5Rat494325173504240173504662Ratregion
36948D5Rat581365171340299171340434Ratregion
36426D5Rat511415172887011172887134Ratregion
36628D5Rat481515166237695166237826Ratregion
35823D5Rat501465173687608173687766Ratregion
39700D5Rat1851245171194040171194163Ratregion
38026D5Rat1092495170273699170273947Ratregion
40740D5Rat1812275165550783165550999Ratregion
38574D5Rat1112255170908981170909209Ratregion
42767D5Rat2431335166481145166481283Ratregion
42768D5Rat2602495164803790164804026Ratregion
42769D5Rat2442005169696938169697122Ratregion
41492D5Rat1781745161084664161084824Ratregion
41044D8Rat1422145165654280165654483Ratregion
41070D5Rat1801495165718244165718386Ratregion
43873D5Got1141865165627541165627726Ratregion
43996D5Got1041655163109276163109440Ratregion
43997D5Got1011255162861915162862039Ratregion
43998D5Got1371175162761377162761493Ratregion
43999D5Got982385162804124162804360Ratregion
44001D5Got971665163262616163262781Ratregion
44002D5Got963475161879412161879758Ratregion
44007D5Got1132855167184438167184722Ratregion
44009D5Got1101985166866143166866340Ratregion
44009D5Got1101985166763422166763619Ratregion
44010D5Got1052525164943662164943913Ratregion
44012D5Got1061655165477715165477877Ratregion
44013D5Got1182935171188021171188313Ratregion
44014D5Got1171195170890371170890489Ratregion
44015D5Got1161525170764233170764381Ratregion
44017D5Got1392025169943273169943474Ratregion
44018D5Got1201305172297964172298094Ratregion
44020D5Got1221465173158374173158519Ratregion
44021D5Got1211075173389643173389749Ratregion
60474D5Got1031645163170459163170694Ratregion
69529D5Uwm492495166409918166410170Ratregion
69550D5Uwm501475169116134169116283Ratregion
61299D5Mco102265168109415168109659Ratregion
1630702D5Got2511415167269941167270081Ratregion
1629746D5Got2941095169246581169246684Ratregion
1640372D5Got2522025173639582173639783Ratregion
1635827D5Wox333455164794256164794600Ratregion
7192178Prkcz2225172660142172660363Ratregion
7193102AA8197552145173386710173386923Ratregion
7205906UniSTS:49331405173103990173105394Ratregion
7206072Srm05165407456165408136Ratregion
7206480Mad2l21455164951723164951867Ratregion
7206498UniSTS:5466889235168140329168141251Ratregion
5035951PMC316718P14945164808537164809030Ratregion
7206402mMECIR6337715166964506166965276Ratregion
7206514UniSTS:5468138125167000648167001459Ratregion
7206686UniSTS:5475232175164808707164808923Ratregion
5039226RH1275841955171306896171307090Ratregion
5039142RH1275362045167664136167664339Ratregion
5037131HSC11D0222825165432255165432536Ratregion
5031274PMC123178P15135164808479164808991Ratregion
5025976RH1304241855164796730164797367Ratregion
5028661RH1258992505173267628173267877Ratregion
7205832D17S18359575162405038162405994Ratregion
5031386PMC15566P12665164808767164809032Ratregion
5026286RH1316291805169513969169514148Ratregion
5026334RH1318081855162066671162066855Ratregion
5026334RH1318081855162053219162053403Ratregion
5031830AU0470112275166805603166805829Ratregion
5031830AU0470112275166805603166805713Ratregion
5026448RH1322521895169231404169231592Ratregion
5031898AU0467812215166963438166963658Ratregion
5034548BE1193581785167168284167168462Ratregion
5034608BF3901211625172884834172884995Ratregion
5026760RH1334252055166602184166602388Ratregion
5034732BI2762051815167662415167662595Ratregion
5034734BF3919161635166440526166440688Ratregion
5034790AI2322551185172773690172773807Ratregion
5026848RH1337631505172655398172655547Ratregion
5029403RH1446591625171306327171306488Ratregion
5029559AA8197551485173386797173386944Ratregion
5035050UniSTS:2596153545172364481172365010Ratregion
5035102RH444681655168140237168140401Ratregion
5026990RH1343051875172476242172476428Ratregion
5029635BF3864511865173154472173154662Ratregion
5029677BF3869341735172269083172269255Ratregion
5032367AU023234975162198521162198617Ratregion
5032491D4Ertd432e2045165760588165760791Ratregion
5032517Nppa3525164808144164808495Ratregion
5035366BE1144971505166959629166959778Ratregion
5027169SGC382582575165893826165894082Ratregion
5029757BF3870711765172695873172696048Ratregion
5029817BF3875231925172923110172923302Ratregion
5029827BF3876301835173417494173417676Ratregion
5032655RH1348051895162891615162891803Ratregion
5027281AI7853031005166999273166999372Ratregion
5027285AU043380935172476839172476931Ratregion
5035266BM3852181545169231855169232008Ratregion
5024996BB450868835165776841165776923Ratregion
5030317BE1057191625164636889164637050Ratregion
5033129RH1377041325161135017161135148Ratregion
5025246RH1275782205161946325161946544Ratregion
5030415BE1062451095166440980166441088Ratregion
5030527BF4038461815168440565168440745Ratregion
5028053R750601505166156802166156951Ratregion
5030837BE1140201595164957800164957958Ratregion
5025704RH1293371805166049322166049501Ratregion
5028322SHGC-741831745167662428167662601Ratregion
5033687RH1397422115173014018173014228Ratregion
5033839RH1403102175164888326164888542Ratregion
5025798RH1297152115172519761172519971Ratregion
5028438AU0146681315166156062166156192Ratregion
5028440U825341425173462996173463137Ratregion
5054939RH1435131235173336942173337064Ratregion
5051218RH1345071955173182427173182621Ratregion
5051382AW5570661515169449821169449971Ratregion
5053577RH1427291085166619130166619237Ratregion
5056321RH1443111335173261946173262078Ratregion
5056499RH1444142875173566420173566706Ratregion
5056677RH1445162565171662913171663168Ratregion
5056959RH1446792105166516249166516458Ratregion
5051809RH946711975167299333167299529Ratregion
5054127RH1430462075167356697167356903Ratregion
5057492AA8190201915173275731173276018Ratregion
5054453RH1432331125169493094169493283Ratregion
5054727RH1433901075162893833162893939Ratregion
5057546BE0955212025167686989167687190Ratregion
5057748AI5486351495164909766164909914Ratregion
5057930BF3863382005172627633172627832Ratregion
5057982AI548909905167664263167664352Ratregion
5055855RH1440411095165070393165071528Ratregion
5059580BE0973351955166142755166142949Ratregion
5056495RH1444112205169464552169464771Ratregion
505221342.MMHAP20FRF12.seq1745161847761161847934Ratregion
5058112BF3866081625173152500173152661Ratregion
5058184BF3867671615172989934172990094Ratregion
5055311RH1437282365172045198172045433Ratregion
5059728BE1030351515169653141169653291Ratregion
5059802BI2854182335164861710164861942Ratregion
5055527RH1438522215169167502169167722Ratregion
5055541RH1438612715166640234166640504Ratregion
5052843RH1423061645161947490161947653Ratregion
5060022BI2858501765171626518171626693Ratregion
5058288BF3869621905173314786173314975Ratregion
5058334BF4194451265168104117168104242Ratregion
5052333U373511605173267678173267837Ratregion
5058398AI7057921765169486415169486590Ratregion
5058450BE0961311725171620738171620909Ratregion
5058454BE0961501575165761430165761586Ratregion
5050754RH1342392015173354525173354725Ratregion
5050766RH1342462135166409544166409756Ratregion
5053601RH1427431015164648220164648320Ratregion
5053947RH1429421225166682198166682319Ratregion
5050244RH1339442145168126932168127145Ratregion
5052949RH1423671535164889531164889683Ratregion
5054373RH1431871545173560516173560669Ratregion
5050498RH1340912015169463679169463880Ratregion
5050532RH1341112105172631771172631980Ratregion
5053193RH1425072175166051740166051956Ratregion
5053415RH1426352015166633546166633746Ratregion
5051811RH946721845169658618169658801Ratregion
5054745RH1434011495168135955168136103Ratregion
5054839RH1434551755172797711172797885Ratregion
5050834RH1342852205172889076172889295Ratregion
5050902RH1343241835173077208173077610Ratregion
5043990RH1303471805173336426173336673Ratregion
5040804RH1284932195172365613172365831Ratregion
5044290RH1305181885169155273169155460Ratregion
5044632RH1307151525172328309172328460Ratregion
5040982RH1285951925168126249168126440Ratregion
5041200RH1287202055166913902166914106Ratregion
5043624RH1301332175164886867164887083Ratregion
5043932RH1303141815166512798166512978Ratregion
5046120RH1315692015165772780165772980Ratregion
5041754RH1290392175169449965169450181Ratregion
5041814RH1290741985165430838165431035Ratregion
5046534RH1318091955173421583173421777Ratregion
5046548RH1318171815173672450173672630Ratregion
5045564RH1312501945173049881173050074Ratregion
5045746RH1313551985169189745169189942Ratregion
5049052RH1332581815164956494164956674Ratregion
5049096RH1332832095166672835166673043Ratregion
5047996RH1326482065172631771172631976Ratregion
5046924RH1320332085165966150165966357Ratregion
5048098RH1327071495172038967172039115Ratregion
5049330RH1334182075171456399171456605Ratregion
5046958RH1320521835164864073164864255Ratregion
5046994RH1320732135164955755164956055Ratregion
5047056RH1321082035169292880169293082Ratregion
5049680RH1336192065171294094171294299Ratregion
5039596RH1277961905173590071173590260Ratregion
5042080RH1292272085166914392166914599Ratregion
5042126RH1292551505169485434169485583Ratregion
5047376RH1322911825169569620169569801Ratregion
5042392RH1294081805171306908171307087Ratregion
5049552RH1335471805164811850164812029Ratregion
5040016RH1280411905172474763172474952Ratregion
5040236RH1281672025164685355164685556Ratregion
5040236RH1281672025164561548164561749Ratregion
5042854RH1296841805166512803166512982Ratregion
5039342RH1276512115164757391164757601Ratregion
5039430RH1277012185166601338166601555Ratregion
5039622RH1278111805171307243171307422Ratregion
5039728RH1278731805168181068168181246Ratregion
5039738RH1278781995173292483173292681Ratregion
5039916RH1279812135173189753173189965Ratregion
5040742RH1284572205167299338167299557Ratregion
5040792RH1284861945165235553165235746Ratregion
5040116RH1280981935173003593173003785Ratregion
5042846RH1296791975173314291173314487Ratregion
5040990RH1286001825169333521169334088Ratregion
5043714RH1301851545165782970165783123Ratregion
5042912RH1297182005165247664165247863Ratregion
5043034RH12979105165416346165416995Ratregion
5075176RH1384422115173169451173169661Ratregion
5072088RH1366441965173055972173056167Ratregion
5073926RH1377192155173141279173141493Ratregion
5074064RH1377981405165996274165996413Ratregion
5072298RH136768995164977776164977874Ratregion
5072306RH1367731765173446987173447162Ratregion
5074558RH1380861555165982829165982983Ratregion
5074706RH1381711205169572734169573427Ratregion
5074764RH1382052305171804565171804794Ratregion
5076058RH1389551345173337092173337225Ratregion
5075208RH1384611715169154693169154863Ratregion
5077090RH1395541915172798484172798931Ratregion
5076906RH1394471985164850741164850938Ratregion
5076912RH1394511265165916660165916785Ratregion
5077388RH1397272015173487290173487490Ratregion
5078144RH1401692085172143717172143924Ratregion
5079734RH1411721835172557537172557719Ratregion
5079872RH1412521805170616628170616807Ratregion
5080016RH1413341885173307780173307967Ratregion
5078306RH1402641905172960600172960789Ratregion
5078954RH1406482195166999392166999610Ratregion
5079282RH1408911855166511242166511426Ratregion
5080302RH1415011825166980997166981178Ratregion
5070906RH1347741955169191880169192074Ratregion
5071004RH1348311865162884474162884659Ratregion
5073478RH1374592195163013354163013572Ratregion
5080548RH1416431805169288038169288217Ratregion
5071424RH1350741945173248070173248263Ratregion
5070796RH1347101705165373785165373954Ratregion
5071808RH1352962125161770689161770900Ratregion
5070986RH1348201895166994752166994940Ratregion
5073400RH1374141985167226412167226609Ratregion
5071898RH1353481815168140327168140507Ratregion
5074478RH1380402125172303660172303871Ratregion
5071418RH1350701825173624916173625097Ratregion
5074724RH1381821765165766868165767043Ratregion
5074880RH1382721435165052183165052325Ratregion
5061814AW5337091525173542601173542754Ratregion
5063404BE1076221595166028829166028987Ratregion
5065072BF4056241505169101060169101209Ratregion
5061840AW5338242015166584382166584582Ratregion
5067092AU0479691605172274149172274308Ratregion
5067160AU0479242445162424694162424939Ratregion
5067536AU0476862955167826922167827211Ratregion
5067806AU0475252375170986178170986414Ratregion
5068050AU0473771585170221312170221469Ratregion
5068474AU0471231385173573147173573284Ratregion
5070043RH944351925163186351163186541Ratregion
5068782AU0469361825169553487169553663Ratregion
5069442AU0464951775166481146166481324Ratregion
5070061RH944471745173590633173590806Ratregion
5068982AU0468022185168682868168683080Ratregion
5070450AI8506291585164811873164812030Ratregion
5070452AI8361681245172304844172304967Ratregion
5062006BI2881001665165889738165889902Ratregion
5063698BE1079981835172849517172849699Ratregion
5062500BF4033241795168537877168538055Ratregion
5064014BE1204431535161794757161794909Ratregion
5065462BE1155731765165785289165785464Ratregion
5062526BE1067911505167095374167095523Ratregion
5062568BE1068662165170740323170740538Ratregion
5062652BF4036941175172156826172156942Ratregion
5062670BF4037531135165778760165778872Ratregion
5064190BE1141941555168292133168292287Ratregion
5065816BE1099261765166604641166604816Ratregion
5060262BG378368905163094249163094338Ratregion
5060300AW5311991505172658105172658254Ratregion
5062118BE1062291805168794050168794229Ratregion
5060372AW5252901825169492663169492844Ratregion
5062230BE1063891945166915349166915542Ratregion
5063874BE1201261545164860965164861118Ratregion
5060878BF3958921335169896642169896774Ratregion
5064332BE1144212085168508604168508811Ratregion
5062944AA9556731375173260048173260182Ratregion
5061206BE0992861555172557307172557461Ratregion
5064634BF399470995166249243166249341Ratregion
5064780BF4116851105166601475166601584Ratregion
5061400BE0997651695172959990172960158Ratregion
5061598BE1055821885162198438162198625Ratregion
5082183BI2803861535164808979164809523Ratregion
5086201AA8586192015165408073165408273Ratregion
5086251BE1214461635171250375171250537Ratregion
5087183AI4065241505173303207173303356Ratregion
5087285AW5308001855169063420169063604Ratregion
5082515BI2749751095169340130169340238Ratregion
5082627BF4164482455169479593169479837Ratregion
5086537AI4124631775173264238173264414Ratregion
5087249BE1086162125162029445162029656Ratregion
5082801BF3901351605167888109167888268Ratregion
5082801BF3901351605167840006167840165Ratregion
5087346AW9160951695166156855166157023Ratregion
5089901AU0494311815162827538162827718Ratregion
5089909AU0494361525170792776170792927Ratregion
5089967AU0494702395163197498163197730Ratregion
5083113BI2751901655164720845164721009Ratregion
5088046Prkcz1815172660489172660858Ratregion
5088507AU0486111415161965831161965971Ratregion
5083739AI2377641575166593113166593269Ratregion
5084080AA8942941695162389207162389375Ratregion
5090211AU0496162845162022113162022396Ratregion
5084374AA9447471945167122078167122271Ratregion
5081939BE1187921565172546826172546981Ratregion
5084774AI4108451945165793879165794072Ratregion
5084988AI1051041395173169451173169589Ratregion
5082347BI2745981095165943011165943119Ratregion
5085409AA9429381515173149527173149677Ratregion
5090649AU0498792115165148661165148871Ratregion
5088581AU0486551035166043215166043317Ratregion
5085218BE0964801655173652200173652364Ratregion
5085615BM3840512205167093129167093348Ratregion
5089135AU0489741595161491127161491285Ratregion
5085854BM3909501575173269345173269501Ratregion
5086064AW5294591965172724910172725105Ratregion
5080908RH1418521915173083617173083893Ratregion
5082947BF3904642125172807785172807996Ratregion
5086337BM3863752075167052669167052875Ratregion
5081256RH1420551805169153807169153986Ratregion
5084758AI1792881285164887046164887173Ratregion
5084906AI0086921935173037034173037226Ratregion
5084986AI0088621805166055612166055791Ratregion
5086638BM3880471715166391737166391907Ratregion
5081475AA9985101865166278244166278429Ratregion
5085264BE0965511705163121673163121842Ratregion
5083471BI2823031135165776248165776360Ratregion
5085726AW5269051215172703775172703895Ratregion
5503031MARC_65458-65459:1186500885:31555164727842164728578Ratregion
5503035Mib214805173087863173089342Ratregion
5503041Mib27335173083165173083897Ratregion
5503356D4Mon5016075173366106173367712Ratregion
5503358D4Mon121455173495240173495384Ratregion
5503362D4Mon53655173371323173371387Ratregion
5503164ksks1603095161796179161796487Ratregion
5503364D4Mon541695173371681173371849Ratregion
5504492PMC23157P105172801053172801502Ratregion
5504604PMC312773P31205161827987161828106Ratregion
5504286D1S1828E1175172051822172051938Ratregion
5504841ha241905170812678170814131Ratregion
5505273Tprgl725171457293171458054Ratregion
5505564UniSTS:4822669195167220026167220944Ratregion
5505574UniSTS:4848879555172364448172365402Ratregion
5505978UniSTS:496742955169163339169163433Ratregion
5506376UniSTS:4790445425165432687165433228Ratregion
5506435UniSTS:4793073225173462349173462670Ratregion
5506937RH1018472175169191772169191988Ratregion
5499871UniSTS:2351162635172365573172365835Ratregion
5501684UniSTS:2657162695172365415172365683Ratregion
5502158MARC_7131-7132:996687522:105165365472165366221Ratregion
5502158MARC_7131-7132:996687522:105165365472165365933Ratregion
5499867UniSTS:2351021975168086036168086232Ratregion
5499865UniSTS:2350932815164811855164812135Ratregion
5503366D4Mon592145173379871173380084Ratregion
5503368D4Mon602225173381781173382002Ratregion
5501363RH1590705166585833166586234Ratregion
5501462D1S2335E1175169439820169439936Ratregion
5502118MARC_5059-5060:996690096:13095173077254173077864Ratregion
5502469RH1249691335172557571172557703Ratregion
Position Markers

Flank 1: (D5Rat178)
Rat AssemblyChrPosition (strand)Source
Rnor_6.05161,084,664 - 161,084,824NCBI
Rnor_5.05164,789,054 - 164,789,214UniSTS
RGSC_v3.45161,449,395 - 161,449,555RGD
RGSC_v3.45161,449,396 - 161,449,558UniSTS
RGSC_v3.15161,459,512 - 161,459,852RGD
Celera5153,176,928 - 153,177,089UniSTS
SHRSP x BN Map594.3499UniSTS
SHRSP x BN Map594.3499RGD
Peak: (D5Rat50)
Rat AssemblyChrPosition (strand)Source
Rnor_6.05173,687,608 - 173,687,766NCBI
Rnor_5.05177,161,648 - 177,161,806UniSTS
Celera5165,048,509 - 165,048,667UniSTS
RH 3.4 Map51167.5UniSTS
RH 3.4 Map51167.5RGD
RH 2.0 Map51168.7RGD
FHH x ACI Map5102.9199RGD
Flank 2: (D5Rat246)
Rat AssemblyChrPosition (strand)Source
RH 3.4 Map51151.1RGD
RH 3.4 Map51151.1UniSTS
RH 2.0 Map51142.7RGD
SHRSP x BN Map5105.0599RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2302369Scl60Serum cholesterol level QTL 603.13blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)5149568588167739697Rat
631263Cm24Cardiac mass QTL 243.5heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)5149832180164807402Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5142309061173707219Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5132551937173707219Rat
1331721Bp210Blood pressure QTL 2103.413arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)5149029982173687766Rat
1298090Bp155Blood pressure QTL 1553.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)5157212422167739539Rat
631562Apr2Acute phase response QTL 23.7blood murinoglobulin 1 amount (VT:0010597)plasma murinoglobulin 1 level (CMO:0001931)5142307322173707219Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5136354114173707219Rat
631272Lanf1Left ventricular atrial natriuretic factor QTL 112heart left ventricle natriuretic peptide A amount (VT:0010596)heart left ventricle natriuretic peptide A level (CMO:0002165)5157319671173707219Rat
631498Bp100Blood pressure QTL 1004.90.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5164797538164808407Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5138154677172402610Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)584963058173504662Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5128687766173687766Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5133943857173707219Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5133943857173707219Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5134197905173707219Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)547745646167946134Rat
1300119Bp180Blood pressure QTL 1803.82arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)5150340838164298744Rat
1354631Swd2Spike wave discharge measurement QTL 23.640.0002brain electrophysiology trait (VT:0010557)brain total spike-and-wave discharge duration (CMO:0001740)5157319671171194163Rat
1549904Neuinf1Neuroinflammation QTL 130nervous system integrity trait (VT:0010566)blood T lymphocyte count (CMO:0000110)5161084664173707219Rat
2313096Bmd78Bone mineral density QTL 783.10.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)5150360936167946134Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)561612600168109659Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5116767924161767924Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5136640731173707219Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5134712342173707219Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5116767924161767924Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5116767924161767924Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5116767924161767924Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5134712342173707219Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5131077716173707219Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 18 DA/Ztm, 18 PVG/OlaHsd, 24 F1 and 186 F2 1358788
qtl_general measurement method: all animals were anesthetized by isoflurane at 6-8 weeks of age and subjected to unilateral avulsion of the left L3-L5 ventral roots, they were killed and spinal cord examined; serial transverse sections of L4 were cut and examined, T cell infiltration was measured by the assessment of the number of CD3 positive cells 1358788
qtl_map maps to the telomeric end of chr 5 1358788
qtl_statistics_details linkage analysis performed using MAPMAKER/QTL and R/qtl computer software 1358788