Vamp3 (vesicle-associated membrane protein 3) - Rat Genome Database

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Gene: Vamp3 (vesicle-associated membrane protein 3) Rattus norvegicus
Analyze
Symbol: Vamp3
Name: vesicle-associated membrane protein 3
RGD ID: 61880
Description: Enables syntaxin-1 binding activity. Involved in protein-containing complex assembly. Located in apical plasma membrane; clathrin-coated vesicle membrane; and recycling endosome. Part of SNARE complex. Is active in synaptic vesicle membrane. Orthologous to human VAMP3 (vesicle associated membrane protein 3); PARTICIPATES IN autophagy pathway; phagocytosis pathway; INTERACTS WITH 1,2,4-trimethylbenzene; 3H-1,2-dithiole-3-thione; 4,4'-sulfonyldiphenol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: CEB; cellubrevin; MGC108618; synaptobrevin-3; VAMP-3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85166,780,927 - 166,791,522 (-)NCBIGRCr8
mRatBN7.25161,498,109 - 161,508,704 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5161,498,109 - 161,508,751 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5164,214,807 - 164,225,406 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05166,031,426 - 166,042,030 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05165,993,451 - 166,004,050 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05168,126,157 - 168,136,628 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5168,126,157 - 168,136,666 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05171,703,252 - 171,713,723 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45168,190,569 - 168,201,165 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15168,200,756 - 168,386,085 (-)NCBI
Celera5159,750,283 - 159,760,878 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Export of cellubrevin from the endoplasmic reticulum is controlled by BAP31. Annaert WG, etal., J Cell Biol. 1997 Dec 15;139(6):1397-410.
2. Changes in mRNA for VAMPs following facial nerve transection. Che YH, etal., J Chem Neuroanat 2002 Jul;24(2):147-52.
3. Cellubrevin and synaptobrevins: similar subcellular localization and biochemical properties in PC12 cells. Chilcote TJ, etal., J Cell Biol. 1995 Apr;129(1):219-31.
4. Water channel-carrying vesicles in the rat IMCD contain cellubrevin. Franki N, etal., Am J Physiol. 1995 Sep;269(3 Pt 1):C797-801.
5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
6. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
7. Identification of a novel Bves function: regulation of vesicular transport. Hager HA, etal., EMBO J. 2010 Feb 3;29(3):532-45. doi: 10.1038/emboj.2009.379. Epub 2010 Jan 7.
8. Syntaxin 2 and endobrevin are required for the terminal step of cytokinesis in mammalian cells. Low SH, etal., Dev Cell 2003 May;4(5):753-9.
9. A plethora of presynaptic proteins associated with ATP-storing organelles in cultured astrocytes. Maienschein V, etal., Glia. 1999 May;26(3):233-44.
10. Cellubrevin is a ubiquitous tetanus-toxin substrate homologous to a putative synaptic vesicle fusion protein. McMahon HT, etal., Nature 1993 Jul 22;364(6435):346-9.
11. Overview of macroautophagy regulation in mammalian cells. Mehrpour M, etal., Cell Res. 2010 Jul;20(7):748-62. Epub 2010 Jun 15.
12. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
13. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
14. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
15. GOA pipeline RGD automated data pipeline
16. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
17. SNAP-23 participates in SNARE complex assembly in rat adipose cells. St-Denis JF, etal., Biochem J 1999 Mar 15;338 ( Pt 3):709-15.
18. Molecular anatomy of a trafficking organelle. Takamori S, etal., Cell. 2006 Nov 17;127(4):831-46.
19. A tubular endosomal fraction from rat liver: biochemical evidence of receptor sorting by default. Verges M, etal., Proc Natl Acad Sci U S A. 1999 Aug 31;96(18):10146-51.
Additional References at PubMed
PMID:12130530   PMID:12477932   PMID:15489334   PMID:15920476   PMID:18195106   PMID:18253931   PMID:18321981   PMID:18505797   PMID:19061864   PMID:19144319   PMID:19478182   PMID:20582536  
PMID:20847273   PMID:21151919   PMID:22144578   PMID:22589474   PMID:22871113   PMID:24055037   PMID:25008321   PMID:26629404   PMID:27551042   PMID:29476059  


Genomics

Comparative Map Data
Vamp3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85166,780,927 - 166,791,522 (-)NCBIGRCr8
mRatBN7.25161,498,109 - 161,508,704 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5161,498,109 - 161,508,751 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5164,214,807 - 164,225,406 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05166,031,426 - 166,042,030 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05165,993,451 - 166,004,050 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05168,126,157 - 168,136,628 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5168,126,157 - 168,136,666 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05171,703,252 - 171,713,723 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45168,190,569 - 168,201,165 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15168,200,756 - 168,386,085 (-)NCBI
Celera5159,750,283 - 159,760,878 (-)NCBICelera
Cytogenetic Map5q36NCBI
VAMP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3817,771,296 - 7,781,432 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl17,771,296 - 7,781,432 (+)EnsemblGRCh38hg38GRCh38
GRCh3717,831,356 - 7,841,492 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3617,753,916 - 7,764,079 (+)NCBINCBI36Build 36hg18NCBI36
Build 3417,765,594 - 7,775,757NCBI
Celera16,939,057 - 6,949,218 (+)NCBICelera
Cytogenetic Map1p36.23NCBI
HuRef16,979,774 - 6,989,939 (+)NCBIHuRef
CHM1_117,819,031 - 7,829,192 (+)NCBICHM1_1
T2T-CHM13v2.017,302,342 - 7,312,478 (+)NCBIT2T-CHM13v2.0
Vamp3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394151,131,762 - 151,142,410 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4151,131,757 - 151,142,420 (-)EnsemblGRCm39 Ensembl
GRCm384151,047,305 - 151,057,953 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4151,047,300 - 151,057,963 (-)EnsemblGRCm38mm10GRCm38
MGSCv374150,421,414 - 150,432,062 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364149,891,105 - 149,901,753 (-)NCBIMGSCv36mm8
Celera4153,323,081 - 153,333,830 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map481.53NCBI
Vamp3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554865,103,106 - 5,112,176 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554865,103,228 - 5,112,157 (-)NCBIChiLan1.0ChiLan1.0
VAMP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21220,444,847 - 220,455,016 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11219,085,975 - 219,096,144 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v016,534,115 - 6,544,275 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.117,782,810 - 7,792,958 (+)NCBIpanpan1.1PanPan1.1panPan2
VAMP3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1561,430,711 - 61,440,626 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl561,430,740 - 61,439,063 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha561,439,454 - 61,449,379 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0561,647,556 - 61,657,492 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl561,647,531 - 61,657,492 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1561,646,808 - 61,656,746 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0561,511,261 - 61,521,200 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0561,914,945 - 61,924,879 (+)NCBIUU_Cfam_GSD_1.0
Vamp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505831,793,913 - 31,802,660 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366232,280,534 - 2,287,898 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
VAMP3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1668,473,921 - 68,482,438 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
VAMP3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120123,973,672 - 123,984,230 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20123,971,992 - 123,984,187 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605428,008,620 - 28,019,197 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Vamp3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248184,009,991 - 4,019,728 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248184,010,130 - 4,019,695 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Vamp3
36 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:524
Count of miRNA genes:258
Interacting mature miRNAs:310
Transcripts:ENSRNOT00000051554
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5135929696166875058Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5126424772166875058Rat
631562Apr2Acute phase response QTL 23.7blood murinoglobulin 1 amount (VT:0010597)plasma murinoglobulin 1 level (CMO:0001931)5135927956166875058Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5130130159166875058Rat
631272Lanf1Left ventricular atrial natriuretic factor QTL 112heart left ventricle natriuretic peptide A amount (VT:0010596)heart left ventricle natriuretic peptide A level (CMO:0002165)5151113452166875058Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5132717196165560427Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128924607166875058Rat
1331721Bp210Blood pressure QTL 2103.413arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)5143069996166846814Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)582394392166664054Rat
1354631Swd2Spike wave discharge measurement QTL 23.640.0002brain electrophysiology trait (VT:0010557)brain total spike-and-wave discharge duration (CMO:0001740)5151113452164465185Rat
1549904Neuinf1Neuroinflammation QTL 130nervous system integrity trait (VT:0010566)blood T lymphocyte count (CMO:0000110)5154828214166875058Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5121846814166846814Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5127798274166875058Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5127798274166875058Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5131345754166875058Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5128506074166875058Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5128506074166875058Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat

Markers in Region
RH128595  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25161,498,200 - 161,498,392 (+)MAPPERmRatBN7.2
Rnor_6.05168,126,249 - 168,126,440NCBIRnor6.0
Rnor_5.05171,703,344 - 171,703,535UniSTSRnor5.0
RGSC_v3.45168,190,661 - 168,190,852UniSTSRGSC3.4
Celera5159,750,375 - 159,750,566UniSTS
RH 3.4 Map51131.9UniSTS
Cytogenetic Map5q36UniSTS
RH133944  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.210106,511,071 - 106,511,278 (+)MAPPERmRatBN7.2
mRatBN7.25161,498,883 - 161,499,097 (+)MAPPERmRatBN7.2
Rnor_6.05168,126,932 - 168,127,145NCBIRnor6.0
Rnor_6.010110,437,315 - 110,437,521NCBIRnor6.0
Rnor_5.010110,023,973 - 110,024,179UniSTSRnor5.0
Rnor_5.05171,704,027 - 171,704,240UniSTSRnor5.0
RGSC_v3.45168,191,344 - 168,191,557UniSTSRGSC3.4
RGSC_v3.410110,467,748 - 110,467,954UniSTSRGSC3.4
Celera10105,049,293 - 105,049,499UniSTS
Celera5159,751,058 - 159,751,271UniSTS
RH 3.4 Map51130.2UniSTS
Cytogenetic Map5q36UniSTS
Cytogenetic Map10q32.3UniSTS
RH143401  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25161,508,030 - 161,508,179 (+)MAPPERmRatBN7.2
Rnor_6.05168,135,955 - 168,136,103NCBIRnor6.0
Rnor_5.05171,713,050 - 171,713,198UniSTSRnor5.0
RGSC_v3.45168,200,491 - 168,200,639UniSTSRGSC3.4
Celera5159,760,205 - 159,760,353UniSTS
RH 3.4 Map51129.6UniSTS
Cytogenetic Map5q36UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 74 35 41 11 8
Low
Below cutoff

Sequence


RefSeq Acc Id: ENSRNOT00000051554   ⟹   ENSRNOP00000048364
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5161,498,177 - 161,508,751 (-)Ensembl
Rnor_6.0 Ensembl5168,126,157 - 168,136,666 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000108568   ⟹   ENSRNOP00000082314
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5161,498,109 - 161,506,856 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000110400   ⟹   ENSRNOP00000083016
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5161,500,075 - 161,506,599 (-)Ensembl
RefSeq Acc Id: NM_057097   ⟹   NP_476438
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85166,780,927 - 166,791,522 (-)NCBI
mRatBN7.25161,498,109 - 161,508,704 (-)NCBI
Rnor_6.05168,126,157 - 168,136,628 (-)NCBI
Rnor_5.05171,703,252 - 171,713,723 (-)NCBI
RGSC_v3.45168,190,569 - 168,201,165 (-)RGD
Celera5159,750,283 - 159,760,878 (-)RGD
Sequence:
RefSeq Acc Id: NP_476438   ⟸   NM_057097
- UniProtKB: P63025 (UniProtKB/Swiss-Prot),   A6IUF1 (UniProtKB/TrEMBL),   A0A8L2QPJ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000048364   ⟸   ENSRNOT00000051554
RefSeq Acc Id: ENSRNOP00000082314   ⟸   ENSRNOT00000108568
RefSeq Acc Id: ENSRNOP00000083016   ⟸   ENSRNOT00000110400
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P63025-F1-model_v2 AlphaFold P63025 1-103 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694288
Promoter ID:EPDNEW_R4813
Type:initiation region
Name:Vamp3_1
Description:vesicle-associated membrane protein 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.05168,136,646 - 168,136,706EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:61880 AgrOrtholog
BioCyc Gene G2FUF-39043 BioCyc
Ensembl Genes ENSRNOG00000030055 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00055014964 UniProtKB/Swiss-Prot
  ENSRNOG00060003545 UniProtKB/Swiss-Prot
  ENSRNOG00065009620 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000051554 ENTREZGENE
  ENSRNOT00000051554.5 UniProtKB/TrEMBL
  ENSRNOT00000108568.1 UniProtKB/TrEMBL
  ENSRNOT00000110400.1 UniProtKB/TrEMBL
  ENSRNOT00055025603 UniProtKB/Swiss-Prot
  ENSRNOT00060005810 UniProtKB/Swiss-Prot
  ENSRNOT00065015430 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.5.110 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7366421 IMAGE-MGC_LOAD
InterPro Synaptobrevin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Synaptobrevin/VAMP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  V_SNARE_CC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:29528 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:108618 IMAGE-MGC_LOAD
NCBI Gene 29528 ENTREZGENE
PANTHER PTHR45701 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VESICLE-ASSOCIATED MEMBRANE PROTEIN 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Synaptobrevin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Vamp3 PhenoGen
PIRSF Synaptobrevin_euk UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS SYNAPTOBREVN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE SYNAPTOBREVIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  V_SNARE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000030055 RatGTEx
  ENSRNOG00055014964 RatGTEx
  ENSRNOG00060003545 RatGTEx
  ENSRNOG00065009620 RatGTEx
Superfamily-SCOP SNARE fusion complex UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I5ZTR0_RAT UniProtKB/TrEMBL
  A0A8I5ZZ29_RAT UniProtKB/TrEMBL
  A0A8L2QPJ9 ENTREZGENE, UniProtKB/TrEMBL
  A6IUF1 ENTREZGENE, UniProtKB/TrEMBL
  P63025 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q64271 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2002-06-10 Vamp3  vesicle-associated membrane protein 3       Name updated 70584 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_expression expressed in facial motor nucleus; expression is downregulated in facial nucleus following axotomy 727412
gene_process may play a role in nerve regeneration 727412