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Gene: Slc2a7 (solute carrier family 2 member 7) Rattus norvegicus

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Symbol:

Slc2a7

Name:

solute carrier family 2 member 7

RGD ID:

1583902

Description:

Predicted to enable D-glucose transmembrane transporter activity and fructose transmembrane transporter activity. Predicted to be involved in D-glucose import; dehydroascorbic acid transport; and fructose transmembrane transport. Predicted to be located in apical plasma membrane. Predicted to be active in plasma membrane. Orthologous to human SLC2A7 (solute carrier family 2 member 7); INTERACTS WITH acrylamide; bisphenol A; gentamycin.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

glucose transporter type 7; GLUT-7; LOC100362644; LOC691471; similar to intestinal facilitative glucose transporter 7; solute carrier family 2 (facilitated glucose transporter), member 7; solute carrier family 2, facilitated glucose transporter member 7

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC2A7 (solute carrier family 2 member 7)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Slc2a7 (solute carrier family 2 (facilitated glucose transporter), member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLC2A7 (solute carrier family 2 member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slc2a7 (solute carrier family 2 member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLC2A7 (solute carrier family 2 member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLC2A7 (solute carrier family 2 member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	SLC2A5 (solute carrier family 2 member 5)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	SLC2A7 (solute carrier family 2 member 7)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc2a7 (solute carrier family 2 (facilitated glucose transporter), member 7)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG7882	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder)
Drosophila melanogaster (fruit fly):	sut1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder)
Drosophila melanogaster (fruit fly):	sut2	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder)
Saccharomyces cerevisiae (baker's yeast):	VPS73	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YBR241C	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	C35A11.4	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Caenorhabditis elegans (roundworm):	F13B12.2	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Drosophila melanogaster (fruit fly):	sut3	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder)
Caenorhabditis elegans (roundworm):	K08F9.1	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Caenorhabditis elegans (roundworm):	Y37A1A.3	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Caenorhabditis elegans (roundworm):	slcf-2	Alliance	DIOPT (Ensembl Compara\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	165,907,721 - 165,927,277 (+)	NCBI		GRCr8
mRatBN7.2	5	160,624,793 - 160,643,994 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	160,624,793 - 160,643,514 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	163,341,254 - 163,360,451 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	165,163,127 - 165,182,312 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	165,119,812 - 165,139,016 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	167,195,981 - 167,211,613 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	167,195,981 - 167,211,391 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	170,826,294 - 170,839,549 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	167,287,943 - 167,318,833 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	5	158,885,103 - 158,901,022 (+)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc2a7	Rat	chromosome 1p36 deletion syndrome		ISO	SLC2A7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Chromosome 1p36 deletion syndrome	ClinVar
Slc2a7	Rat	Neurodevelopmental Disorders		ISO	SLC2A7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc2a7	Rat	acrylamide	decreases expression	EXP		6480464	Acrylamide results in decreased expression of SLC2A7 mRNA	CTD	PMID:28959563
Slc2a7	Rat	aflatoxin B1	increases methylation	ISO	SLC2A7 (Homo sapiens)	6480464	Aflatoxin B1 results in increased methylation of SLC2A7 intron	CTD	PMID:30157460
Slc2a7	Rat	aldehydo-D-glucose	increases transport	ISO	SLC2A7 (Homo sapiens)	6480464	SLC2A7 protein results in increased transport of Glucose	CTD	PMID:15033637 and PMID:17710649
Slc2a7	Rat	arsane	affects methylation	ISO	SLC2A7 (Homo sapiens)	6480464	Arsenic affects the methylation of SLC2A7 gene	CTD	PMID:25304211
Slc2a7	Rat	arsenic atom	affects methylation	ISO	SLC2A7 (Homo sapiens)	6480464	Arsenic affects the methylation of SLC2A7 gene	CTD	PMID:25304211
Slc2a7	Rat	benzo[a]pyrene	affects methylation	ISO	SLC2A7 (Homo sapiens)	6480464	Benzo(a)pyrene affects the methylation of SLC2A7 promoter	CTD	PMID:27901495
Slc2a7	Rat	benzo[e]pyrene	increases methylation	ISO	SLC2A7 (Homo sapiens)	6480464	benzo(e)pyrene results in increased methylation of SLC2A7 intron	CTD	PMID:30157460
Slc2a7	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of SLC2A7 mRNA	CTD	PMID:25181051
Slc2a7	Rat	bisphenol A	decreases methylation	ISO	Slc2a7 (Mus musculus)	6480464	bisphenol A results in decreased methylation of SLC2A7 promoter	CTD	PMID:27312807
Slc2a7	Rat	D-glucose	increases transport	ISO	SLC2A7 (Homo sapiens)	6480464	SLC2A7 protein results in increased transport of Glucose	CTD	PMID:15033637 and PMID:17710649
Slc2a7	Rat	fructose	increases transport	ISO	SLC2A7 (Homo sapiens)	6480464	SLC2A7 protein results in increased transport of Fructose	CTD	PMID:15033637 and PMID:17710649
Slc2a7	Rat	gentamycin	increases expression	EXP		6480464	Gentamicins results in increased expression of SLC2A7 mRNA	CTD	PMID:33387578
Slc2a7	Rat	glucose	increases transport	ISO	SLC2A7 (Homo sapiens)	6480464	SLC2A7 protein results in increased transport of Glucose	CTD	PMID:15033637 and PMID:17710649
Slc2a7	Rat	methapyrilene	increases methylation	ISO	SLC2A7 (Homo sapiens)	6480464	Methapyrilene results in increased methylation of SLC2A7 intron	CTD	PMID:30157460
Slc2a7	Rat	methoxychlor	affects methylation	EXP		6480464	Methoxychlor affects the methylation of SLC2A7 gene	CTD	PMID:35440735
Slc2a7	Rat	resveratrol	multiple interactions	ISO	SLC2A7 (Homo sapiens)	6480464	[Plant Extracts co-treated with Resveratrol] results in decreased expression of SLC2A7 mRNA	CTD	PMID:23557933
Slc2a7	Rat	sodium arsenite	decreases expression	ISO	Slc2a7 (Mus musculus)	6480464	sodium arsenite results in decreased expression of SLC2A7 mRNA	CTD	PMID:36209798 and PMID:37682722
Slc2a7	Rat	trichloroethene	increases expression	EXP		6480464	Trichloroethylene results in increased expression of SLC2A7 mRNA	CTD	PMID:33387578

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc2a7	Rat	D-glucose import	involved_in	IBA	MGI:95758 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Slc2a7	Rat	D-glucose transmembrane transport	NOT\|involved_in	ISO	SLC2A7 (Homo sapiens)	1624291	PMID:28083649	RGD	PMID:28083649
Slc2a7	Rat	D-glucose transmembrane transport	involved_in	IEA	UniProtKB:Q6PXP3 and ensembl:ENSP00000383698	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc2a7	Rat	D-glucose transmembrane transport	involved_in	IEA	ARBA:ARBA00026318	1600115	GO_REF:0000117	UniProt	GO_REF:0000117
Slc2a7	Rat	D-glucose transmembrane transport	involved_in	ISO	SLC2A7 (Homo sapiens)	1624291	PMID:29548810	RGD	PMID:29548810
Slc2a7	Rat	D-glucose transmembrane transport	NOT\|involved_in	ISS	UniProtKB:Q6PXP3	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Slc2a7	Rat	dehydroascorbic acid transport	involved_in	IBA	MGI:1095438 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Slc2a7	Rat	fructose transmembrane transport	NOT\|involved_in	ISS	UniProtKB:Q6PXP3	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Slc2a7	Rat	fructose transmembrane transport	involved_in	ISO	SLC2A7 (Homo sapiens)	1624291	PMID:29548810	RGD	PMID:29548810
Slc2a7	Rat	fructose transmembrane transport	NOT\|involved_in	ISO	SLC2A7 (Homo sapiens)	1624291	PMID:28083649	RGD	PMID:28083649
Slc2a7	Rat	fructose transmembrane transport	involved_in	IEA	UniProtKB:Q6PXP3 and ensembl:ENSP00000383698	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc2a7	Rat	transmembrane transport	involved_in	IEA	InterPro:IPR003663 more ...	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc2a7	Rat	apical plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0015	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Slc2a7	Rat	membrane	located_in	IEA	InterPro:IPR003663 more ...	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Slc2a7	Rat	membrane	located_in	IEA	UniProtKB-SubCell:SL-0162	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Slc2a7	Rat	membrane	located_in	IEA	UniProtKB-KW:KW-0472	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Slc2a7	Rat	plasma membrane	located_in	ISO	SLC2A7 (Homo sapiens)	1624291	PMID:28083649	RGD	PMID:28083649
Slc2a7	Rat	plasma membrane	located_in	IEA	UniProtKB:Q6PXP3 and ensembl:ENSP00000383698	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc2a7	Rat	plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0039	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Slc2a7	Rat	plasma membrane	located_in	IEA	UniProtKB-KW:KW-1003	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Slc2a7	Rat	plasma membrane	is_active_in	IBA	MGI:1095438 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Slc2a7	Rat	plasma membrane	located_in	ISS	UniProtKB:Q6PXP3	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Slc2a7	Rat	plasma membrane	located_in	IEA	ARBA:ARBA00027801	1600115	GO_REF:0000117	UniProt	GO_REF:0000117

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc2a7	Rat	D-glucose transmembrane transporter activity	enables	IEA	UniProtKB:Q6PXP3 and ensembl:ENSP00000383698	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc2a7	Rat	D-glucose transmembrane transporter activity	enables	IBA	MGI:1095438 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Slc2a7	Rat	D-glucose transmembrane transporter activity	enables	ISO	SLC2A7 (Homo sapiens)	1624291	PMID:29548810	RGD	PMID:29548810
Slc2a7	Rat	D-glucose transmembrane transporter activity	NOT\|enables	ISS	UniProtKB:Q6PXP3	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Slc2a7	Rat	D-glucose transmembrane transporter activity	NOT\|enables	ISO	SLC2A7 (Homo sapiens)	1624291	PMID:28083649	RGD	PMID:28083649
Slc2a7	Rat	fructose transmembrane transporter activity	NOT\|enables	ISS	UniProtKB:Q6PXP3	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Slc2a7	Rat	fructose transmembrane transporter activity	enables	ISO	SLC2A7 (Homo sapiens)	1624291	PMID:29548810	RGD	PMID:29548810
Slc2a7	Rat	fructose transmembrane transporter activity	NOT\|enables	ISO	SLC2A7 (Homo sapiens)	1624291	PMID:28083649	RGD	PMID:28083649
Slc2a7	Rat	fructose transmembrane transporter activity	enables	IEA	UniProtKB:Q6PXP3 and ensembl:ENSP00000383698	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc2a7	Rat	hexose transmembrane transporter activity	enables	IEA	ARBA:ARBA00028790	1600115	GO_REF:0000117	UniProt	GO_REF:0000117
Slc2a7	Rat	transmembrane transporter activity	enables	IEA	InterPro:IPR003663 more ...	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:28083649

Slc2a7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	165,907,721 - 165,927,277 (+)	NCBI		GRCr8
mRatBN7.2	5	160,624,793 - 160,643,994 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	160,624,793 - 160,643,514 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	163,341,254 - 163,360,451 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	165,163,127 - 165,182,312 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	165,119,812 - 165,139,016 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	167,195,981 - 167,211,613 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	167,195,981 - 167,211,391 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	170,826,294 - 170,839,549 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	167,287,943 - 167,318,833 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	5	158,885,103 - 158,901,022 (+)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

SLC2A7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	8,992,534 - 9,026,423 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	9,002,973 - 9,026,423 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	9,063,032 - 9,086,482 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	8,985,946 - 9,008,991 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	8,997,624 - 9,020,670	NCBI
Celera	1	8,172,056 - 8,195,080 (-)	NCBI		Celera
Cytogenetic Map	1	p36.23	NCBI
HuRef	1	8,213,158 - 8,236,183 (-)	NCBI		HuRef
CHM1_1	1	9,053,282 - 9,076,303 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	8,526,240 - 8,560,063 (-)	NCBI		T2T-CHM13v2.0

Slc2a7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	150,233,293 - 150,253,499 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	150,233,429 - 150,252,939 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	150,148,834 - 150,169,042 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	150,148,972 - 150,168,482 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	149,523,081 - 149,542,591 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	148,992,772 - 149,012,282 (+)	NCBI		MGSCv36	mm8
Celera	4	152,423,736 - 152,443,348 (+)	NCBI		Celera
Cytogenetic Map	4	E2	NCBI
cM Map	4	81.04	NCBI

SLC2A7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	219,203,957 - 219,228,946 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	217,848,716 - 217,873,683 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	7,760,357 - 7,784,105 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	8,994,787 - 9,017,922 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	8,994,787 - 9,017,922 (-)	Ensembl	panpan1.1		panPan2

Slc2a7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	32,717,310 - 32,735,227 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936623	3,205,532 - 3,221,030 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936623	3,205,237 - 3,221,639 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC2A7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	69,484,227 - 69,503,732 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	69,483,736 - 69,503,758 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

SLC2A7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	122,724,595 - 122,749,456 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	122,725,001 - 122,748,899 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	26,742,129 - 26,771,049 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants in Slc2a7
351 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	74
Count of miRNA genes:	58
Interacting mature miRNAs:	60
Transcripts:	ENSRNOT00000055520
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10053720	Scort26	Serum corticosterone level QTL 26	2.06	0.0147	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	124965598	166875058	Rat
631272	Lanf1	Left ventricular atrial natriuretic factor QTL 1	12		heart left ventricle natriuretic peptide A amount (VT:0010596)	heart left ventricle natriuretic peptide A level (CMO:0002165)	5	151113452	166875058	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	2138965	166875058	Rat
2302369	Scl60	Serum cholesterol level QTL 60	3.13		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	143608201	161165651	Rat
631562	Apr2	Acute phase response QTL 2	3.7		blood murinoglobulin 1 amount (VT:0010597)	plasma murinoglobulin 1 level (CMO:0001931)	5	135927956	166875058	Rat
634349	Bp139	Blood pressure QTL 139		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	128924607	166875058	Rat
61444	Strs2	Sensitivity to stroke QTL 2	4.7		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	5	135929696	166875058	Rat
724525	Bp147	Blood pressure QTL 147	4.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	126424772	166875058	Rat
1549904	Neuinf1	Neuroinflammation QTL 1	3	0	nervous system integrity trait (VT:0010566)	blood T lymphocyte count (CMO:0000110)	5	154828214	166875058	Rat
738018	Anxrr4	Anxiety related response QTL 4	5.1		exploratory behavior trait (VT:0010471)	percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)	5	130130159	166875058	Rat
2313096	Bmd78	Bone mineral density QTL 78	3.1	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	5	144377876	161317411	Rat
8552908	Pigfal4	Plasma insulin-like growth factor 1 level QTL 4	6.6		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	128506074	166875058	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	60293434	161481680	Rat
7794791	Mcs33	Mammary carcinoma susceptibility QTL 33	1.93		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	5	131345754	166875058	Rat
1354631	Swd2	Spike wave discharge measurement QTL 2	3.64	0.0002	brain electrophysiology trait (VT:0010557)	brain total spike-and-wave discharge duration (CMO:0001740)	5	151113452	164465185	Rat
1302790	Scl20	Serum cholesterol level QTL 20	6.4	0.0001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	82394392	166664054	Rat
1598861	Cm64	Cardiac mass QTL 64	2.9		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	127798274	166875058	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	46711509	161317411	Rat
631505	Bp103	Blood pressure QTL 103	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	132717196	165560427	Rat
1641920	Colcs1	Colorectal carcinoma susceptibility QTL 1	2.99	0.0055	intestine integrity trait (VT:0010554)	benign colorectal tumor surface area measurement (CMO:0001799)	5	121846814	166846814	Rat
1298090	Bp155	Blood pressure QTL 155	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	151006154	161165494	Rat
1598819	Bp292	Blood pressure QTL 292	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	127798274	166875058	Rat
8694169	Bw148	Body weight QTL 148	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	128506074	166875058	Rat
1331721	Bp210	Blood pressure QTL 210	3.413		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	5	143069996	166846814	Rat

D5Got113

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	160,621,260 - 160,621,545 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	167,184,438 - 167,184,722	NCBI	Rnor6.0
Rnor_5.0	5	170,818,262 - 170,818,546	UniSTS	Rnor5.0
RGSC_v3.4	5	167,296,841 - 167,297,126	RGD	RGSC3.4
RGSC_v3.4	5	167,296,842 - 167,297,126	UniSTS	RGSC3.4
RGSC_v3.1	5	167,307,030 - 167,307,314	RGD
RH 3.4 Map	5	1118.9	UniSTS
RH 3.4 Map	5	1118.9	RGD
RH 2.0 Map	5	1108.4	RGD
Cytogenetic Map	5	q36	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
2	21	14	8	9	6	6	6	35	22	8	5	43	3


RefSeq Transcripts	NM_001393692	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006225659	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	EF501821	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000055520 ⟹ ENSRNOP00000052384

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	160,624,793 - 160,643,514 (+)	Ensembl
Rnor_6.0 Ensembl	5	167,195,981 - 167,211,391 (+)	Ensembl

RefSeq Acc Id:

NM_001393692 ⟹ NP_001380621

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	165,907,721 - 165,926,921 (+)	NCBI
mRatBN7.2	5	160,624,793 - 160,643,994 (+)	NCBI

RefSeq Acc Id:

XM_039111576 ⟹ XP_038967504

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	165,907,721 - 165,927,277 (+)	NCBI
mRatBN7.2	5	160,624,793 - 160,643,994 (+)	NCBI


Protein RefSeqs	NP_001380621	(Get FASTA)	NCBI Sequence Viewer
	XP_038967504	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	A4ZYQ5	(Get FASTA)	NCBI Sequence Viewer
	ABP68403	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000052384

Ensembl Acc Id:

ENSRNOP00000052384 ⟸ ENSRNOT00000055520

RefSeq Acc Id:	XP_038967504 ⟸ XM_039111576
- Peptide Label:	isoform X1
- UniProtKB:	A6IUD0 (UniProtKB/TrEMBL), F1M868 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001380621 ⟸ NM_001393692
- UniProtKB:	A6IUD0 (UniProtKB/TrEMBL)

Protein Domains

Major facilitator superfamily (MFS) profile

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A4ZYQ5-F1-model_v2	AlphaFold	A4ZYQ5	1-512	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-39079	BioCyc
Ensembl Genes	ENSRNOG00000036951	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000055520	ENTREZGENE
Gene3D-CATH	1.20.1250.20	UniProtKB/Swiss-Prot
InterPro	GLUT	UniProtKB/Swiss-Prot
	MFS_dom	UniProtKB/Swiss-Prot
	MFS_sugar_transport-like	UniProtKB/Swiss-Prot
	MFS_trans_sf	UniProtKB/Swiss-Prot
	Sugar/inositol_transpt	UniProtKB/Swiss-Prot
	Sugar_transporter_CS	UniProtKB/Swiss-Prot
NCBI Gene	Slc2a7	ENTREZGENE
PANTHER	PTHR23503	UniProtKB/Swiss-Prot
	SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER MEMBER 7	UniProtKB/Swiss-Prot
Pfam	Sugar_tr	UniProtKB/Swiss-Prot
PhenoGen	Slc2a7	PhenoGen
PRINTS	SUGRTRNSPORT	UniProtKB/Swiss-Prot
PROSITE	MFS	UniProtKB/Swiss-Prot
	SUGAR_TRANSPORT_1	UniProtKB/Swiss-Prot
	SUGAR_TRANSPORT_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000036951	RatGTEx
Superfamily-SCOP	SSF103473	UniProtKB/Swiss-Prot
UniProt	A4ZYQ5	ENTREZGENE
	A6IUD0	ENTREZGENE, UniProtKB/TrEMBL
	F1M868	ENTREZGENE, UniProtKB/TrEMBL
	GTR7_RAT	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-24	Slc2a7	solute carrier family 2 member 7	Slc2a7	solute carrier family 2 (facilitated glucose transporter), member 7	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2014-07-18	Slc2a7	solute carrier family 2 (facilitated glucose transporter), member 7	LOC100362644	solute carrier family 2 (facilitated glucose transporter), member 7	Data merged from RGD:2324314	737654	APPROVED
2010-05-06	LOC100362644	solute carrier family 2 (facilitated glucose transporter), member 7			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-10-09	Slc2a7	solute carrier family 2 (facilitated glucose transporter), member 7	LOC691471	similar to intestinal facilitative glucose transporter 7	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-11-19	LOC691471	similar to intestinal facilitative glucose transporter 7			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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Imported Disease Annotations - ClinVar