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Gene: Lrrc38 (leucine rich repeat containing 38) Rattus norvegicus
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Symbol: Lrrc38
Name: leucine rich repeat containing 38
Description: Predicted to have ion channel binding activity; potassium channel activator activity; and voltage-gated potassium channel activity. Predicted to be involved in positive regulation of voltage-gated potassium channel activity and potassium ion transmembrane transport. Predicted to localize to the voltage-gated potassium channel complex. Orthologous to human LRRC38 (leucine rich repeat containing 38); INTERACTS WITH bisphenol A; butanal (ortholog); doxorubicin (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: leucine-rich repeat-containing protein 38; LOC313681; RGD1311416
Orthologs:
Homo sapiens (human) : LRRC38 (leucine rich repeat containing 38)  HGNC  Alliance
Mus musculus (house mouse) : Lrrc38 (leucine rich repeat containing 38)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lrrc38 (leucine rich repeat containing 38)
Pan paniscus (bonobo/pygmy chimpanzee) : LRRC38 (leucine rich repeat containing 38)
Canis lupus familiaris (dog) : LRRC38 (leucine rich repeat containing 38)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lrrc38 (leucine rich repeat containing 38)
Sus scrofa (pig) : LRRC38 (leucine rich repeat containing 38)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05162,031,722 - 162,053,723 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5162,031,722 - 162,053,723 (+)Ensembl
Rnor_5.05165,757,677 - 165,764,756 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.05165,729,104 - 165,751,417 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45162,225,791 - 162,248,103 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15162,228,185 - 162,257,231 (+)NCBI
Celera5154,014,066 - 154,035,236 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lrrc38
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311416
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.