AU046495 Marker Search Result - Rat Genome Database

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Marker: AU046495

Symbol: AU046495
Previously known as:
RGD ID: 5069442
Expected Size: 179 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr85165,261,670 - 165,261,849 (+)Marker Load Pipeline
mRatBN7.25159,978,617 - 159,978,796 (+)MAPPERmRatBN7.2
Rnor_6.05166,481,146 - 166,481,324NCBIRnor6.0
Rnor_5.05170,127,437 - 170,127,615UniSTSRnor5.0
RGSC_v3.45166,617,732 - 166,617,910UniSTSRGSC3.4
Celera5158,248,260 - 158,248,439UniSTS
Cytogenetic Map5q36UniSTS
Is Marker For: Genes:   Ctnnbip1  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer CGGGGTTAGAGACACACATG
Reverse Primer TAAGAGTACTTGCTGCCTGGG
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1562749Ctnnbip1catenin, beta-interacting protein 15159961961160010942Rat
GenBank Nucleotide AU046495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH615319.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 24 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat
631272Lanf1Left ventricular atrial natriuretic factor QTL 112heart left ventricle natriuretic peptide A amount (VT:0010596)heart left ventricle natriuretic peptide A level (CMO:0002165)5151113452166875058Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
2302369Scl60Serum cholesterol level QTL 603.13blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)5143608201161165651Rat
631562Apr2Acute phase response QTL 23.7blood murinoglobulin 1 amount (VT:0010597)plasma murinoglobulin 1 level (CMO:0001931)5135927956166875058Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128924607166875058Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5135929696166875058Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5126424772166875058Rat
1549904Neuinf1Neuroinflammation QTL 130nervous system integrity trait (VT:0010566)blood T lymphocyte count (CMO:0000110)5154828214166875058Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5130130159166875058Rat

1 to 10 of 24 rows


Database
Acc Id
Source(s)
NCBI Gene 503000 UniSTS