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Gene: Plekhn1 (pleckstrin homology domain containing N1) Rattus norvegicus
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Symbol: Plekhn1
Name: pleckstrin homology domain containing N1
Description: Predicted to have phospholipid binding activity. Predicted to be involved in 3'-UTR-mediated mRNA destabilization; positive regulation of apoptotic process; and response to hypoxia. Predicted to localize to the cytoskeleton and mitochondrial membrane. Orthologous to human PLEKHN1 (pleckstrin homology domain containing N1); INTERACTS WITH amphetamine; bisphenol A; dibutyl phthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC298694; LOC298694; pleckstrin homology domain containing, family N member 1; pleckstrin homology domain-containing family N member 1; RGD1311019; similar to hypothetical protein DKFZp434H2010
Orthologs:
Homo sapiens (human) : PLEKHN1 (pleckstrin homology domain containing N1)  HGNC  Alliance
Mus musculus (house mouse) : Plekhn1 (pleckstrin homology domain containing, family N member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Plekhn1 (pleckstrin homology domain containing N1)
Pan paniscus (bonobo/pygmy chimpanzee) : PLEKHN1 (pleckstrin homology domain containing N1)
Canis lupus familiaris (dog) : PLEKHN1 (pleckstrin homology domain containing N1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Plekhn1 (pleckstrin homology domain containing N1)
Sus scrofa (pig) : PLEKHN1 (pleckstrin homology domain containing N1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05173,646,055 - 173,654,140 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5173,646,195 - 173,653,905 (-)Ensembl
Rnor_5.05177,120,095 - 177,128,194 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45173,056,074 - 173,063,784 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15173,066,841 - 173,073,718 (-)NCBI
Celera5165,007,290 - 165,015,000 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Plekhn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311019
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.