Gabrd (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 5 | 171,240,813 - 171,252,709 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 165,958,508 - 165,970,407 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 165,958,484 - 165,970,411 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 168,663,711 - 168,675,590 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 170,485,123 - 170,497,002 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 170,447,654 - 170,459,533 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 172,797,478 - 172,809,374 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 172,797,450 - 172,809,353 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 176,255,724 - 176,267,620 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 172,203,064 - 172,214,960 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 172,213,559 - 172,225,455 (-) | NCBI | | | | | Celera | 5 | 164,160,929 - 164,172,825 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q36 | NCBI | | | | |
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GABRD (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 2,019,345 - 2,030,758 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 2,019,329 - 2,030,758 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 1,950,784 - 1,962,197 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 1,940,703 - 1,952,050 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 1,983,004 - 1,994,352 | NCBI | | | | | Celera | 1 | 630,843 - 641,887 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | p36.33 | NCBI | | | | | HuRef | 1 | 1,233,788 - 1,239,603 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 1,937,892 - 1,949,316 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 1,454,897 - 1,466,310 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Gabrd (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 4 | 155,469,437 - 155,482,528 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 155,469,437 - 155,482,569 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 155,384,979 - 155,398,098 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 155,384,980 - 155,398,112 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 154,759,088 - 154,772,178 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 154,228,780 - 154,241,862 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 157,658,925 - 157,672,022 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | E2 | NCBI | | | | | cM Map | 4 | 86.17 | NCBI | | | | |
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Gabrd (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955486 | 9,035,330 - 9,039,557 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955486 | 9,035,330 - 9,039,553 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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GABRD (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 226,238,362 - 226,249,814 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 224,896,964 - 224,908,423 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 731,714 - 743,165 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 1,883,955 - 1,895,102 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 1,883,955 - 1,895,102 (+) | Ensembl | panpan1.1 | | panPan2 | |
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GABRD (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 5 | 56,984,786 - 56,994,790 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 56,984,913 - 56,994,358 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 57,061,831 - 57,077,443 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 57,188,326 - 57,203,524 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 57,188,279 - 57,198,308 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 57,178,812 - 57,194,421 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 57,071,329 - 57,086,939 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 57,461,155 - 57,476,777 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Gabrd (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405058 | 28,059,911 - 28,065,511 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936737 | 1,400,395 - 1,406,119 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936737 | 1,400,437 - 1,405,885 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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GABRD (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 6 | 64,049,675 - 64,059,640 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 64,049,665 - 64,059,644 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 58,561,062 - 58,563,060 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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GABRD (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 20 | 129,530,049 - 129,541,437 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 129,529,108 - 129,541,580 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666054 | 33,917,754 - 33,929,160 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Gabrd (Heterocephalus glaber - naked mole-rat) |
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