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Gene: Prdm16 (PR/SET domain 16) Rattus norvegicus
Symbol: Prdm16
Name: PR/SET domain 16
RGD ID: 2324431
Description: Predicted to have several functions, including activating transcription factor binding activity; histone methyltransferase activity (H3-K9 specific); and transcription regulator activity. Predicted to be involved in several processes, including brown fat cell differentiation; positive regulation of brown fat cell differentiation; and regulation of transcription, DNA-templated. Predicted to localize to several cellular components, including aggresome; nucleoplasm; and transcription repressor complex. Orthologous to human PRDM16 (PR/SET domain 16); PARTICIPATES IN histone modification pathway; INTERACTS WITH rotenone; 1,1-dichloroethene (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC100366024; PR domain 16; PR domain containing 16; PR domain containing 16-like; PR domain zinc finger protein 16
Homo sapiens (human) : PRDM16 (PR/SET domain 16)  HGNC  Alliance
Mus musculus (house mouse) : Prdm16 (PR domain containing 16)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prdm16 (PR/SET domain 16)
Pan paniscus (bonobo/pygmy chimpanzee) : PRDM16 (PR/SET domain 16)
Canis lupus familiaris (dog) : PRDM16 (PR/SET domain 16)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prdm16 (PR/SET domain 16)
Sus scrofa (pig) : PRDM16 (PR/SET domain 16)
Chlorocebus sabaeus (African green monkey) : PRDM16 (PR/SET domain 16)
Heterocephalus glaber (naked mole-rat) : Prdm16 (PR/SET domain 16)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.05171,662,277 - 171,711,561 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5171,662,277 - 171,710,316 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05175,133,484 - 175,180,206 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera5163,089,927 - 163,303,567 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Prdm16
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2324431
Created: 2010-05-06
Species: Rattus norvegicus
Last Modified: 2020-11-24
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.