Uts2 (urotensin 2) - Rat Genome Database

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Gene: Uts2 (urotensin 2) Rattus norvegicus
Analyze
Symbol: Uts2
Name: urotensin 2
RGD ID: 3930
Description: Predicted to enable hormone activity. Involved in several processes, including regulation of blood pressure; regulation of circadian sleep/wake cycle; and regulation of heart rate. Located in extracellular space. Used to study hypertension. Biomarker of asthma; cardiomyopathy; endomyocardial fibrosis; myocardial infarction; and pulmonary hypertension. Human ortholog(s) of this gene implicated in gestational diabetes and type 2 diabetes mellitus. Orthologous to human UTS2 (urotensin 2); INTERACTS WITH 17beta-estradiol 3-benzoate; 6-propyl-2-thiouracil; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: U-II; Ucn2; UII; urocortin 2; urotensin II; urotensin-2; urotensin-II
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.25161,450,846 - 161,456,235 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl5161,450,846 - 161,456,237 (+)Ensembl
Rnor_6.05168,078,748 - 168,084,133 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5168,078,748 - 168,084,145 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05171,655,843 - 171,661,228 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45168,143,315 - 168,148,700 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15168,153,502 - 168,158,888 (+)NCBI
Celera5159,703,053 - 159,708,438 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
1. Balat O, etal., Eur J Obstet Gynecol Reprod Biol. 2005 May 1;120(1):33-8.
2. Bousette N, etal., Atherosclerosis. 2004 Sep;176(1):117-23.
3. Cheng DY, etal., Zhonghua Jie He He Hu Xi Za Zhi. 2006 Jun;29(6):381-4.
4. Cheung BM, etal., J Hypertens. 2004 Jul;22(7):1341-4.
5. Coulouarn Y, etal., FEBS Lett 1999 Aug 20;457(1):28-32.
6. Dai HY, etal., J Diabetes Complications. 2008 Mar-Apr;22(2):137-43.
7. Diallo M, etal., Peptides. 2008 May;29(5):813-9. Epub 2007 Nov 6.
8. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
9. GOA data from the GO Consortium
10. Gruson D, etal., Peptides. 2006 Jun;27(6):1527-31. Epub 2005 Dec 20.
11. Huitron-Resendiz S, etal., J Neurosci. 2005 Jun 8;25(23):5465-74.
12. Johns DG, etal., Naunyn Schmiedebergs Arch Pharmacol. 2004 Oct;370(4):238-50. Epub 2004 Sep 30.
13. Langham RG, etal., Am J Kidney Dis. 2004 Nov;44(5):826-31.
14. Lin Y, etal., Hypertens Res. 2003 Oct;26(10):839-45.
15. Liou JY, etal., Clin Exp Pharmacol Physiol. 2009 Jan 17.
16. Lu Y, etal., Peptides. 2002 Sep;23(9):1631-5.
17. Marco J, etal., Peptides. 2008 May;29(5):852-8. Epub 2007 Sep 4.
18. MGD data from the GO Consortium
19. NCBI rat LocusLink and RefSeq merged data July 26, 2002
20. Pelletier G, etal., Neuroscience. 2002;115(2):525-32.
21. Prosser HC, etal., Peptides. 2006 Dec;27(12):3261-8. Epub 2006 Nov 9.
22. Prosser HC, etal., Peptides. 2008 May;29(5):770-7. Epub 2007 Aug 21.
23. Qi J, etal., Heart Vessels. 2004 Mar;19(2):81-8.
24. RGD automated data pipeline
25. RGD automated import pipeline for gene-chemical interactions
26. Russell FD, etal., Am J Physiol Heart Circ Physiol. 2003 Oct;285(4):H1576-81. Epub 2003 Jun 5.
27. Song W, etal., Kidney Int. 2006 Apr;69(8):1360-8.
28. Spinazzi R, etal., Int J Mol Med. 2006 Dec;18(6):1107-12.
29. Suguro T, etal., Clin Sci (Lond). 2008 Dec;115(11):327-34.
30. Sun DJ, etal., Zhonghua Jie He He Hu Xi Za Zhi. 2006 Mar;29(3):185-8.
31. Suzuki S, etal., Peptides. 2004 Oct;25(10):1803-8.
32. Tan YJ, etal., Zhonghua Fu Chan Ke Za Zhi. 2006 Nov;41(11):732-5.
33. Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
34. Tian L, etal., Am J Physiol Endocrinol Metab. 2008 Nov;295(5):E1234-42. Epub 2008 Sep 16.
35. Totsune K, etal., Peptides. 2004 Oct;25(10):1809-14.
36. Tsai CS, etal., Atherosclerosis. 2009 Feb 20.
37. Wang HX, etal., Regul Pept. 2009 Apr 10;154(1-3):85-90. doi: 10.1016/j.regpep.2009.01.004. Epub 2009 Jan 27.
38. Watson AM, etal., Neuroscience. 2008 Jul 31;155(1):241-9. Epub 2008 Jul 1.
39. Wu XJ, etal., Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2007 Dec;24(6):656-9.
40. Zhang YG, etal., Acta Pharmacol Sin. 2007 Jan;28(1):36-43.
41. Zhang YG, etal., J Hypertens. 2008 Jun;26(6):1119-26.
42. Zoccali C, etal., Kidney Int. 2006 Apr;69(7):1253-8.
Additional References at PubMed
PMID:15097239   PMID:16171813   PMID:16685423   PMID:16807543   PMID:18318439   PMID:18355946   PMID:18955090   PMID:19463745   PMID:19797237   PMID:19906507   PMID:19930425   PMID:20025629  
PMID:20422157   PMID:21056072   PMID:21186587   PMID:22044114   PMID:22166643   PMID:22244812   PMID:22270542   PMID:23053343   PMID:23403244   PMID:23933501   PMID:24478001   PMID:24481965  
PMID:24521102   PMID:24878476   PMID:25803040   PMID:26323194   PMID:26453012   PMID:27208703   PMID:27448985   PMID:27613164   PMID:28656205   PMID:29257277   PMID:31473519  


Genomics

Comparative Map Data
Uts2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.25161,450,846 - 161,456,235 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl5161,450,846 - 161,456,237 (+)Ensembl
Rnor_6.05168,078,748 - 168,084,133 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5168,078,748 - 168,084,145 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05171,655,843 - 171,661,228 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45168,143,315 - 168,148,700 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15168,153,502 - 168,158,888 (+)NCBI
Celera5159,703,053 - 159,708,438 (+)NCBICelera
Cytogenetic Map5q36NCBI
UTS2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3817,847,612 - 7,913,249 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl17,843,083 - 7,853,512 (-)EnsemblGRCh38hg38GRCh38
GRCh3717,907,672 - 7,913,551 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3617,830,262 - 7,836,159 (-)NCBINCBI36hg18NCBI36
Build 3417,841,940 - 7,847,838NCBI
Celera17,015,352 - 7,021,232 (-)NCBI
Cytogenetic Map1p36.23NCBI
HuRef17,055,968 - 7,061,853 (-)NCBIHuRef
CHM1_117,895,413 - 7,901,298 (-)NCBICHM1_1
T2T-CHM13v2.017,378,659 - 7,384,534 (-)NCBI
Uts2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394151,081,554 - 151,086,267 (+)NCBIGRCm39mm39
GRCm39 Ensembl4151,081,554 - 151,086,267 (+)Ensembl
GRCm384150,997,097 - 151,001,810 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4150,997,097 - 151,001,810 (+)EnsemblGRCm38mm10GRCm38
MGSCv374150,371,206 - 150,375,919 (+)NCBIGRCm37mm9NCBIm37
MGSCv364149,840,897 - 149,845,610 (+)NCBImm8
Celera4153,272,921 - 153,277,635 (+)NCBICelera
Cytogenetic Map4E2NCBI
Uts2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554865,052,045 - 5,056,610 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554865,052,045 - 5,056,610 (+)NCBIChiLan1.0ChiLan1.0
UTS2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.117,853,824 - 7,864,688 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl17,854,687 - 7,864,688 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v016,609,104 - 6,616,966 (-)NCBIMhudiblu_PPA_v0panPan3
UTS2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1561,503,268 - 61,508,146 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha561,512,208 - 61,524,420 (-)NCBI
ROS_Cfam_1.0561,720,176 - 61,732,192 (-)NCBI
ROS_Cfam_1.0 Ensembl561,720,240 - 61,722,254 (-)Ensembl
UMICH_Zoey_3.1561,719,384 - 61,731,402 (-)NCBI
UNSW_CanFamBas_1.0561,583,986 - 61,596,155 (-)NCBI
UU_Cfam_GSD_1.0561,987,535 - 61,999,550 (-)NCBI
Uts2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505831,855,288 - 31,860,643 (-)NCBI
SpeTri2.0NW_0049366232,339,259 - 2,345,717 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UTS2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl668,552,887 - 68,559,687 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1668,552,889 - 68,560,827 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
UTS2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120123,903,137 - 123,910,180 (+)NCBIChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605427,938,370 - 27,944,781 (+)NCBIVero_WHO_p1.0


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)582394392166664054Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5121846814166846814Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5126424772166875058Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5127798274166875058Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5127798274166875058Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5128506074166875058Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5128506074166875058Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128924607166875058Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5130130159166875058Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5131345754166875058Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5132717196165560427Rat
631562Apr2Acute phase response QTL 23.7blood murinoglobulin 1 amount (VT:0010597)plasma murinoglobulin 1 level (CMO:0001931)5135927956166875058Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5135929696166875058Rat
1331721Bp210Blood pressure QTL 2103.413arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)5143069996166846814Rat
1354631Swd2Spike wave discharge measurement QTL 23.640.0002brain electrophysiology trait (VT:0010557)brain total spike-and-wave discharge duration (CMO:0001740)5151113452164465185Rat
631272Lanf1Left ventricular atrial natriuretic factor QTL 112heart left ventricle natriuretic peptide A amount (VT:0010596)heart left ventricle natriuretic peptide A level (CMO:0002165)5151113452166875058Rat
1549904Neuinf1Neuroinflammation QTL 130nervous system integrity trait (VT:0010566)blood T lymphocyte count (CMO:0000110)5154828214166875058Rat

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:24
Count of miRNA genes:21
Interacting mature miRNAs:23
Transcripts:ENSRNOT00000024798
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium
Low 2 5 6 2
Below cutoff 1 5 6 1 5 7 15 1 9 2 5

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000024798   ⟹   ENSRNOP00000024798
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5161,450,846 - 161,456,237 (+)Ensembl
Rnor_6.0 Ensembl5168,078,748 - 168,084,145 (+)Ensembl
RefSeq Acc Id: NM_019160   ⟹   NP_062033
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25161,450,846 - 161,456,235 (+)NCBI
Rnor_6.05168,078,748 - 168,084,133 (+)NCBI
Rnor_5.05171,655,843 - 171,661,228 (+)NCBI
RGSC_v3.45168,143,315 - 168,148,700 (+)RGD
Celera5159,703,053 - 159,708,438 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_062033 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD55766 (Get FASTA)   NCBI Sequence Viewer  
  EDL81198 (Get FASTA)   NCBI Sequence Viewer  
  Q9QZQ4 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_062033   ⟸   NM_019160
- Peptide Label: precursor
- UniProtKB: Q9QZQ4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSRNOP00000024798   ⟸   ENSRNOT00000024798

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9QZQ4-F1-model_v2 AlphaFold Q9QZQ4 1-123 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Strain Variation

Strain Sequence Variants (MRatBN7.2)
ACI/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
ACI/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN-Lx/CubMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/SsN (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BUF/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH2/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH3/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
DA/OlaHsd (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/DuCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FHH/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE16/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE18/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
GK/FarMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB10/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB2/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB20/IpcvMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB31/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB4/IpcvMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LE/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEW/Crl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF10A/StmMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF11/Stm (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1A/Stm (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1C/Stm (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF2B/Stm (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF3/Stm (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF4/Stm (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LH/MavRrrcAek (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LL/MavRrrcAek (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LN/MavRrrcAek (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/NRrrcMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MR/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MWF/Hsd (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
PVG/Seac (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHR/OlalpcvMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHRSP/A3NCrl (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SR/JrHsd (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SS/JrHsdMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WAG/RijCrl (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/NCrl (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WN/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:3930 AgrOrtholog
BioCyc Gene G2FUF-39045 BioCyc
Ensembl Genes ENSRNOG00000018393 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSRNOP00000024798 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000024798 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro Urotensin_II UniProtKB/Swiss-Prot
KEGG Report rno:29180 UniProtKB/Swiss-Prot
NCBI Gene 29180 ENTREZGENE
Pfam Urotensin_II UniProtKB/Swiss-Prot
PhenoGen Uts2 PhenoGen
PROSITE UROTENSIN_II UniProtKB/Swiss-Prot
TIGR TC201608
UniProt Q9QZQ4 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2002-06-10 Uts2  urotensin 2      Name updated 70584 APPROVED
2001-12-10 Uts2  urotensin 2      Symbol and Name updated to reflect Human and Mouse nomenclature 69665 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_expression mainly expressed in motoneurons of the brainstem and spinal cord 70048