LOC102550429 (uncharacterized LOC102550429) - Rat Genome Database

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Gene: LOC102550429 (uncharacterized LOC102550429) Rattus norvegicus
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Symbol: LOC102550429
Name: uncharacterized LOC102550429
RGD ID: 7567711
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85169,154,264 - 169,179,952 (-)NCBIGRCr8
mRatBN7.25163,882,757 - 163,897,322 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.05170,595,691 - 170,606,694 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05174,120,826 - 174,127,915 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera5162,108,856 - 162,119,857 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC102550429
22 total Variants

1 to 10 of 19 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat
631272Lanf1Left ventricular atrial natriuretic factor QTL 112heart left ventricle natriuretic peptide A amount (VT:0010596)heart left ventricle natriuretic peptide A level (CMO:0002165)5151113452166875058Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
631562Apr2Acute phase response QTL 23.7blood murinoglobulin 1 amount (VT:0010597)plasma murinoglobulin 1 level (CMO:0001931)5135927956166875058Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128924607166875058Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5135929696166875058Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5126424772166875058Rat
1549904Neuinf1Neuroinflammation QTL 130nervous system integrity trait (VT:0010566)blood T lymphocyte count (CMO:0000110)5154828214166875058Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5130130159166875058Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5128506074166875058Rat

1 to 10 of 19 rows






RefSeq Acc Id: XR_010052028
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85169,176,602 - 169,179,949 (-)NCBI
RefSeq Acc Id: XR_354466
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85169,173,068 - 169,179,949 (-)NCBI
mRatBN7.25163,888,321 - 163,897,322 (-)NCBI
Rnor_6.05170,599,354 - 170,606,694 (-)NCBI
Rnor_5.05174,120,826 - 174,127,915 (-)NCBI
Sequence:
RefSeq Acc Id: XR_592806
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85169,173,068 - 169,179,949 (-)NCBI
mRatBN7.25163,888,321 - 163,897,322 (-)NCBI
Rnor_6.05170,599,354 - 170,606,694 (-)NCBI
Sequence:
RefSeq Acc Id: XR_592808
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85169,154,264 - 169,179,952 (-)NCBI
mRatBN7.25163,882,757 - 163,897,322 (-)NCBI
Rnor_6.05170,595,691 - 170,606,694 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-38987 BioCyc
NCBI Gene LOC102550429 ENTREZGENE
PhenoGen LOC102550429 PhenoGen
RNAcentral URS0000CCEE21 RNACentral
  URS0000CCEFCB RNACentral
  URS0000CCF34A RNACentral
  URS0000CCFAB2 RNACentral
  URS0000CCFCC9 RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-18 LOC102550429  uncharacterized LOC102550429      Symbol and Name status set to provisional 70820 PROVISIONAL