D5Wox10 Marker Search Result - Rat Genome Database

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Marker: D5Wox10

Symbol: D5Wox10
Previously known as: oxsts5061; R241; 
RGD ID: 11001
Expected Size: 161 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25158,427,876 - 158,428,037 (+)MAPPERmRatBN7.2
Rnor_6.05164,807,242 - 164,807,402NCBIRnor6.0
Rnor_5.05168,465,144 - 168,465,304UniSTSRnor5.0
RGSC_v3.45165,073,352 - 165,073,513RGDRGSC3.4
RGSC_v3.45165,073,353 - 165,073,513UniSTSRGSC3.4
RGSC_v3.15165,083,540 - 165,083,701RGD
Celera5156,709,720 - 156,709,880UniSTS
RH 3.4 Map51105.1UniSTS
RH 3.4 Map51105.1RGD
RH 2.0 Map51108.0RGD
Cytogenetic Map5q36UniSTS
Is Marker For: QTLs:   Cm24   Apr2  
Genes:   Nppa  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. UniSTS Pipeline RGD automated pipelines
4. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
5. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8


 
Forward Primer GGGACTGATACATGTGGGTATG
Reverse Primer GGTCTCTGTACCTCAATGTTGC
 
GenBank Nucleotide J03267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 26 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat
2302369Scl60Serum cholesterol level QTL 603.13blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)5143608201161165651Rat
631562Apr2Acute phase response QTL 23.7blood murinoglobulin 1 amount (VT:0010597)plasma murinoglobulin 1 level (CMO:0001931)5135927956166875058Rat
631498Bp100Blood pressure QTL 1004.90.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5158418175158429042Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5135929696166875058Rat
1549904Neuinf1Neuroinflammation QTL 130nervous system integrity trait (VT:0010566)blood T lymphocyte count (CMO:0000110)5154828214166875058Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5128506074166875058Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5131345754166875058Rat
1354631Swd2Spike wave discharge measurement QTL 23.640.0002brain electrophysiology trait (VT:0010557)brain total spike-and-wave discharge duration (CMO:0001740)5151113452164465185Rat

1 to 10 of 26 rows


Database
Acc Id
Source(s)
NCBI Gene 24602 UniSTS
  369052 UniSTS
  369131 UniSTS