Ago4 (argonaute RISC component 4)

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Gene: Ago4 (argonaute RISC component 4) Rattus norvegicus

Analyze

Symbol:

Ago4

Name:

argonaute RISC component 4

RGD ID:

1304583

Description:

Predicted to have double-stranded RNA binding activity; miRNA binding activity; and single-stranded RNA binding activity. Predicted to be involved in several processes, including RNA metabolic process; gene silencing by miRNA; and meiotic nuclear division. Predicted to localize to several cellular components, including P-body; RISC complex; and RISC-loading complex. Orthologous to human AGO4 (argonaute RISC component 4); PARTICIPATES IN microRNA pathway; INTERACTS WITH (+)-schisandrin B; 6-propyl-2-thiouracil; acrylamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Also known as:

argonaute 4, RISC catalytic component; argonaute RISC catalytic component 4; Eif2c4; eukaryotic translation initiation factor 2C, 4; LOC298533; protein argonaute-4

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	AGO4 (argonaute RISC component 4)	RGD	RGD
Mus musculus (house mouse):	Ago4 (argonaute RISC catalytic subunit 4)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Ago4 (argonaute RISC component 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	AGO4 (argonaute RISC component 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	AGO4 (argonaute RISC component 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ago4 (argonaute RISC component 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	AGO4 (argonaute RISC component 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	AGO4 (argonaute RISC component 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ago4 (argonaute RISC component 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	AGO4 (argonaute RISC component 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|OMA\|OrthoFinder\|PANTHER)
Mus musculus (house mouse):	Ago4 (argonaute RISC catalytic subunit 4)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	AGO1	Alliance	DIOPT (OMA\|OrthoFinder\|PANTHER)
Caenorhabditis elegans (roundworm):	alg-1	Alliance	DIOPT (OMA\|OrthoFinder\|PANTHER)
Caenorhabditis elegans (roundworm):	alg-2	Alliance	DIOPT (OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

Rnor_6.0 - RGSC Genome Assembly v6.0

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	5	138,780,450 - 138,825,889 (-)	NCBI
Rnor_6.0 Ensembl	5	144,504,938 - 144,556,889 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	5	144,501,875 - 144,557,165 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	5	148,269,991 - 148,328,500 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	145,857,594 - 145,902,950 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	5	145,866,645 - 145,932,628 (-)	NCBI
Celera	5	137,279,250 - 137,322,143 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Charcot-Marie-Tooth disease dominant intermediate C (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

(+)-schisandrin B (EXP)

1,2-dimethylhydrazine (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

butanal (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

chromium(6+) (ISO)

cisplatin (ISO)

diclofenac (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

entinostat (ISO)

ethyl methanesulfonate (ISO)

folic acid (ISO)

fonofos (ISO)

methotrexate (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

paracetamol (ISO)

parathion (ISO)

PCB138 (ISO)

pentanal (ISO)

phenobarbital (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

potassium dichromate (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

terbufos (ISO)

tetrachloromethane (EXP)

tetraphene (ISO)

trimellitic anhydride (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

male gonad development (ISO)

male meiotic nuclear division (ISO)

miRNA loading onto RISC involved in gene silencing by miRNA (ISO)

miRNA mediated inhibition of translation (ISO)

miRNA metabolic process (ISO)

mRNA catabolic process (ISO)

mRNA cleavage involved in gene silencing by miRNA (ISO)

mRNA cleavage involved in gene silencing by siRNA (ISO)

negative regulation of apoptotic process (ISO)

pre-miRNA processing (ISO)

production of miRNAs involved in gene silencing by miRNA (ISO)

regulation of cell morphogenesis (ISO)

RNA secondary structure unwinding (ISO)

synaptonemal complex assembly (ISO)

translational initiation (IEA)

Cellular Component

cellular_component (ND)

cytoplasm (ISO)

cytoplasmic ribonucleoprotein granule (ISO)

cytosol (IEA,ISO)

nucleus (ISO)

P-body (ISO)

RISC complex (ISO)

RISC-loading complex (ISO)

Molecular Function

double-stranded RNA binding (ISO)

miRNA binding (ISO)

molecular_function (ND)

protein binding (ISO)

RNA binding (ISO)

single-stranded RNA binding (ISO)

translation initiation factor activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

microRNA pathway (ISO)

References

References - curated


1.	Ender C and Meister G, J Cell Sci. 2010 Jun 1;123(Pt 11):1819-23.
2.	RGD automated import pipeline for gene-chemical interactions
3.	RGD comprehensive gene curation

Additional References at PubMed

PMID:15260970	PMID:18771919	PMID:19536157	PMID:19898466	PMID:19946888	PMID:19966796	PMID:22795694	PMID:22863743

Genomics

Comparative Map Data

Ago4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	5	138,780,450 - 138,825,889 (-)	NCBI
Rnor_6.0 Ensembl	5	144,504,938 - 144,556,889 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	5	144,501,875 - 144,557,165 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	5	148,269,991 - 148,328,500 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	145,857,594 - 145,902,950 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	5	145,866,645 - 145,932,628 (-)	NCBI
Celera	5	137,279,250 - 137,322,143 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

AGO4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	1	35,808,016 - 35,857,890 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	1	35,807,630 - 35,857,890 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	1	36,273,237 - 36,323,491 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	36,046,415 - 36,093,775 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	1	35,942,920 - 35,990,281	NCBI
Celera	1	34,548,288 - 34,595,633 (+)	NCBI
Cytogenetic Map	1	p34.3	NCBI
HuRef	1	34,391,417 - 34,441,140 (+)	NCBI		HuRef
CHM1_1	1	36,390,239 - 36,439,851 (+)	NCBI		CHM1_1

Ago4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	126,383,280 - 126,427,379 (-)	NCBI	GRCm39		mm39
GRCm39 Ensembl	4	126,383,334 - 126,427,265 (-)	Ensembl
GRCm38	4	126,489,487 - 126,533,586 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	126,489,541 - 126,533,472 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	126,166,785 - 126,210,702 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	4	125,994,456 - 126,035,544 (-)	NCBI			mm8
Celera	4	124,826,342 - 124,870,087 (-)	NCBI		Celera
Cytogenetic Map	4	D2.2	NCBI

Ago4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955452	13,882,416 - 13,922,590 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955452	13,882,416 - 13,922,590 (+)	NCBI	ChiLan1.0	ChiLan1.0

AGO4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	1	36,249,040 - 36,299,259 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	36,249,038 - 36,299,259 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	1	35,072,045 - 35,122,418 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

AGO4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	15	6,329,413 - 6,356,676 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	15	6,325,899 - 6,351,748 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Ago4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936474	18,335,536 - 18,371,398 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AGO4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	91,973,119 - 92,012,990 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	91,967,499 - 92,013,030 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	85,255,835 - 85,296,920 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AGO4
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	97,001,484 - 97,056,131 (-)	NCBI
ChlSab1.1 Ensembl	20	97,003,566 - 97,056,051 (-)	Ensembl

Ago4
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624764	18,838,887 - 18,883,915 (+)	NCBI

QTLs in Region (Rnor_6.0)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	35788756	147487820	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	40777918	154732375	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	47745646	167946134	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	51418671	147487820	Rat
61426	Scl2	Serum cholesterol level QTL 2	7.3	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	61086525	149030144	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	61612600	168109659	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	71552569	157225114	Rat
1302790	Scl20	Serum cholesterol level QTL 20	6.4	0.0001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	84963058	173504662	Rat
61452	Ciaa5	CIA Autoantibody QTL 5	3.5		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	5	97921932	149030144	Rat
1331796	Thshl2	Thyroid stimulating hormone level QTL 2	2.3		blood thyroid-stimulating hormone amount (VT:0005119)	serum thyroid stimulating hormone level (CMO:0001248)	5	100723739	153577831	Rat
1358187	Emca1	Estrogen-induced mammary cancer QTL 1	4.4		mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	5	102945579	154732228	Rat
1578673	Bmd13	Bone mineral density QTL 13	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	5	107119214	152119214	Rat
2317056	Wbc3	White blood cell count QTL 3	2.51	0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	5	111278451	156278451	Rat
1549838	Bss4	Bone structure and strength QTL 4	9.2		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	5	112279412	157279412	Rat
7207481	Bss106	Bone structure and strength QTL 106	7.9		femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	112279412	157279412	Rat
7207486	Bss109	Bone structure and strength QTL 109			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	5	112279412	157279412	Rat
7207488	Bss110	Bone structure and strength QTL 1	8.4		femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	5	112279412	157279412	Rat
7207491	Bss112	Bone structure and strength QTL 112	7		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	5	112279412	157279412	Rat
1298089	Scl14	Serum cholesterol level QTL 14	5.8	0.0004	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	114140832	159140832	Rat
1598847	Cm62	Cardiac mass QTL 62	3.4		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	114140832	159140832	Rat
8552960	Pigfal15	Plasma insulin-like growth factor 1 level QTL 15			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	116767924	161767924	Rat
8694198	Abfw3	Abdominal fat weight QTL 3	16.13	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	5	116767924	161767924	Rat
8694389	Bw160	Body weight QTL 160	6.17	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	5	116767924	161767924	Rat
8694441	Bw169	Body weight QTL 169	17.61	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	5	116767924	161767924	Rat
1581510	Cm54	Cardiac mass QTL 54	3.4	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	5	125455818	149568944	Rat
2293642	Bss37	Bone structure and strength QTL 37	4.64	0.0001	femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	125455818	157225114	Rat
1641920	Colcs1	Colorectal carcinoma susceptibility QTL 1	2.99	0.0055	intestine integrity trait (VT:0010554)	benign colorectal tumor surface area measurement (CMO:0001799)	5	128687766	173687766	Rat
1300122	Wbc1	White blood cell count QTL 1	2.75		leukocyte quantity (VT:0000217)	total white blood cell count (CMO:0000365)	5	130531300	145726262	Rat
10053720	Scort26	Serum corticosterone level QTL 26	2.06	0.0147	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	131077716	173707219	Rat
724525	Bp147	Blood pressure QTL 147	4.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	132551937	173707219	Rat
1598819	Bp292	Blood pressure QTL 292	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	133943857	173707219	Rat
1598861	Cm64	Cardiac mass QTL 64	2.9		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	133943857	173707219	Rat
634349	Bp139	Blood pressure QTL 139		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	134197905	173707219	Rat
1331803	Rf32	Renal function QTL 32	2.798		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	134502121	149030144	Rat
70156	Niddm30	Non-insulin dependent diabetes mellitus QTL 30	3.98		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	5	134502140	157212422	Rat
8552908	Pigfal4	Plasma insulin-like growth factor 1 level QTL 4	6.6		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	134712342	173707219	Rat
8694169	Bw148	Body weight QTL 148	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	134712342	173707219	Rat
738018	Anxrr4	Anxiety related response QTL 4	5.1		exploratory behavior trait (VT:0010471)	percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)	5	136354114	173707219	Rat
7794791	Mcs33	Mammary carcinoma susceptibility QTL 33	1.93		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	5	136640731	173707219	Rat
631505	Bp103	Blood pressure QTL 103	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	138154677	172402610	Rat
631562	Apr2	Acute phase response QTL 2	3.7		blood murinoglobulin 1 amount (VT:0010597)	plasma murinoglobulin 1 level (CMO:0001931)	5	142307322	173707219	Rat
61444	Strs2	Sensitivity to stroke QTL 2	4.7		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	5	142309061	173707219	Rat

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	376
Count of miRNA genes:	210
Interacting mature miRNAs:	244
Transcripts:	ENSRNOT00000035373
Prediction methods:	Microtar, Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium			1	1	9	1			33			9
Low	3	38	56	40	10	40	8	9	41	35	41	2	8
Below cutoff		5						2

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238862	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039109632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000035373 ⟹ ENSRNOP00000029180

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	5	144,504,938 - 144,556,889 (-)	Ensembl

RefSeq Acc Id:

NM_001106686 ⟹ NP_001100156

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	5	138,783,069 - 138,825,632 (-)	NCBI
Rnor_6.0	5	144,504,938 - 144,556,889 (-)	NCBI
Rnor_5.0	5	148,269,991 - 148,328,500 (-)	NCBI
RGSC_v3.4	5	145,857,594 - 145,902,950 (-)	RGD
Celera	5	137,279,250 - 137,322,143 (-)	RGD

Sequence:

show sequence

GCGTCTTCGCGGCGCCGCTTCAGCGCCAATATTCCGGAGAGCAAGCGTTACGCGGCGGCGGCGG
GGCCCGGAGCGGGAGGCGCCGGGGACCGGGGCGAGGCGGCCCCCGCCGCCGCCATGGAGGCGCT
GGGACCCGGACCTCCAGCCAGCCTCTTCCAGCCACCCCGGCGTCCTGGCCTTGGCACTGTTGGG
AAACCAATCCGACTGTTAGCCAATCATTTTCAGGTTCAGATTCCTAAAATAGATGTGTATCACT
ATGATGTGGATATTAAACCGGAAAAACGGCCTCGTAGAGTCAACAGGGAGGTAGTAGACACTAT
GGTGCGACACTTCAAGATGCAGATATTTGGAGATCGGCAGCCTGGCTATGATGGCAAAAGAAAC
ATGTACACAGCACATCCACTGCCAATCGGACGGGATAGGGTTGATATGGAGGTGACCCTCCCAG
GTGAGGGCAAGGACCAAACGTTCAAAGTGTCAGTGCAATGGGTGTCAGTTGTGAGCCTTCAGCT
GCTTTTAGAAGCTTTAGCTGGACACCTGAGTGAAGTCCCAGATGACTCAGTACAAGCCCTTGAC
GTGATTACAAGGCATCTCCCCTCTATGAGGTACACTCCAGTAGGCCGGTCTTTTTTCTCACCTC
CTGAAGGTTACTACCACCCTCTGGGAGGGGGCAGAGAGGTCTGGTTCGGCTTTCACCAGTCTGT
GCGCCCTGCCATGTGGAAGATGATGCTCAACATTGATGTATCTGCAACTGCTTTCTACCGGGCT
CAGCCCATCATTGAGTTCATGTGTGAGGTTTTAGACATCCAGAACATCAACGAGCAGACGAAAC
CTCTAACAGACTCCCAGCGTGTCAAGTTTACCAAAGAAATCAGGGGTAGGTCTTAAAGTTGAGG
TGACTCACTGTGGACAGATGAAACGAAAATATCGAGTTTGTAATGTGACAAGACGACCAGCCAG
TCATCAAACCTTCCCTTTGCAGCTAGAAAATGGTCAAGCTATGGAATGTACAGTAGCTCAGTAT
TTTAAGCAAAAATATAATCTGCAGCTGAAATACTCCCATCTTCCCTGCCTTCAAGTGGGACAAG
AGCAAAAGCATACATACCTGCCACTTGAGGTCTGTAATATAGTAGCAGGGCAGAGATGTATAAA
GAAGCTCACAGACAACCAGACATCCACCATGATCAAAGCCACAGCGAGATCTGCTCCTGACAGA
CAGGAGGAAATCAGTAGACTGGTGAAGAGCAACAGCGTGCTGGGTGGACCTGACCCATACCTGA
AGGAATTTGGGATCGTTGTGCACAATGAGATGACGGAACTCATGGGCAGGGTGCTTCCGGCGCC
AATGCTGCAGTATGGAGGCCGGAATAAAACAGTAGCCACACCCAACCAGGGTGTCTGGGACATG
CGAGGAAAGCAGTTTTATGCTGGCATTGAAATTAAAGTATGGGCAGTGGCTTGTTTTGCGCCTC
AGAAACAATGTAGGGAAGATTTGCTAAAGAGCTTCACTGACCAACTTCGTAAAATCTCCAAGGA
TGCAGGGATGCCCATCCAGGGTCAACCATGTTTCTGCAAATATGCTCAAGGTGCAGACAGTGTG
GAGCCCATGTTTAAACATCTGAAAATGACATATGTGGGCCTGCAGCTAATAGTGGTGATTTTGC
CTGGGAAGACACCAGTATATGCGGAGGTGAAGCGTGTTGGAGATACCCTCCTAGGTATGGCCAC
GCAGTGTGTCCAGGTCAAAAATGTTGTGAAGACCTCGCCACAAACCCTTTCCAACCTTTGTCTG
AAGATAAACGCAAAGCTTGGAGGAATTAACAACGTACTTGTGCCTCATCAAAGGCCCTCAGTGT
TCCAGCAGCCTGTCATCTTCCTGGGAGCAGATGTCACTCATCCACCTGCTGGGGATGGGAAGAA
GCCTTCTATTGCAGCGGTGGTGGGCAGCATGGATGGCCATCCCAGTCGGTACTGTGCCACTGTC
CGGGTGCAGACATCTCGCCAGGAGATTGCCCAGGAGCTCCTGTTCAGTCAGGAGGTCGTGCAGG
ACCTGACGAGCATGGCTCGGGAGCTGCTGATTCAGTTCTATAAGTCCACGCGCTTCAAGCCCAC
GCGTATCATCTACTACCGCGGAGGGGTATCCGAGGGACAGATGAAACAGGTAGCTTGGCCAGAA
CTAATAGCAATTCGAAAGGCATGTATAAGTCTGGAGGAAGACTACCGGCCAGGAATAACCTACA
TTGTGGTACAAAAGCGACATCACACACGACTCTTCTGTGCAGATAAAACAGAAAGGGTGGGGAA
AAGTGGCAATGTCCCAGCAGGCACTACGGTGGATAGCACCATCACACATCCATCGGAGTTTGAC
TTTTACCTCTGCAGTCATGCAGGAATTCAGGGAACCAGTCGTCCTTCACATTACCAGGTCCTGT
GGGATGACAACTGCTTTACCGCGGATGAACTGCAGCTGCTGACCTACCAGCTCTGCCACACCTA
CGTGAGGTGCACACGCTCAGTCTCCATTCCTGCCCCTGCATATTATGCCCGGCTTGTAGCATTC
CGGGCAAGGTATCATTTGGTGGACAAAGATCATGACAGTGCGGAAGGCAGTCACGTGTCAGGAC
AGAGCAACGGCCGGGATCCTCAAGCCTTGGCTAAGGCGGTGCAGATCCACCATGATACCCAGCA
CACTATGTATTTTGCCTGAGAGTCTTGGAAAAGAACTCAACCAATTTGGCATCCCACGCATCCT
CAAAATGTTTCAGATGCCTACTGCCTCTCTTAGTGCACAGTGATTTCAGGTGGTCCCTACCAGC
AGCTCAGAAAAGTTGCACTGAATCTGTACTCTGTAGCCCTGTCTGATGCATCAACAAAATCGAG
CCTTTTTTTTTTTTTAAGAAATAGATACTCATAGATTATGTTTTCTGATGCACTGGGCAGAATT
TTTACCTCAACGTGCGAAGGCTGATTAGCCTTGACTTTCTAAAGGACTTTCCAAGAAGGGTTTC
TGTGGAATATTTTGCTAGCTGTGGTATTCACCGCATCTAGTCTTATAAGAGGAGTATTTCCTTT
TTTCTGTGTTATTGACTGGAGTGTGTACATAAGAACATTTGGAAGAGAGAAACCAAACGACCTG
GATCATTTCCATGTAACTTTTTAATTGAGTGGGTCCGTAGACTTCTTAATGGAGATTTCTTACT
TTGCCACTGCAAATGCCTTTGAGGAGCATTAAGTTTTGAAAGTTTTCCAGAACTCTGTTACCTT
CACTGCGTTATCTGACTGACCTCTCCGGGCCTGCGCTGTAGAGTACAGGCTGCCTGGTGATTGC
ACTAATACTTGGCTGAGATTTGAACAGGCAGCTCCCTTCCTTGGCTGGCTTTTGTGAATCTGTG
ACATAAGCAGATGTGATGTGTGTCACAGGGACAGATAACACTGCCAATGGTAAAAAGTACCCAT
GTTCTCCATATTTGGGAAAAAAAAGAATTAGTTTTTAGTATTTTTCCACATTTTCAAAAGTGCC
CATTTTATGCTGCTGTGTGGTGTGTTAGATCTAAACGATCTTTAAACTTCTCTCATAGAAAATT
AACTTTGGCAATAAGCATTTTTAAGGTCTCTGCTCTTTTTCCTCCTGACATAGTTTTCTAGATA
AGATTTCAGTATGATTTTATCAACTATTTCTTGTATCTCATAACTGGGATATTCTGAAACCAGT
TTATAAAGACATGGATTTCCATGTC

hide sequence

RefSeq Acc Id:

XM_006238862 ⟹ XP_006238924

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	5	138,780,450 - 138,825,888 (-)	NCBI
Rnor_6.0	5	144,501,875 - 144,557,165 (-)	NCBI
Rnor_5.0	5	148,269,991 - 148,328,500 (-)	NCBI

Sequence:

show sequence

ATCCTGCCGCACCCCGCCCCCTGCCTCGGACCTGCTCGCTGGACCCTGCGCGTGCCGGGCTGCG
CACGCCCCCTTCGCCAGCCGGGACCCCGGACCGCACGCGCCTGGCGCCCCCTCCCTGCCCGGCG
GGCGCGCGCCGCCTCCCGCTCCCGCTCCAGCTGGCGGCGGCGGCGGCGGCCCGGATTGTTTTTG
TTGTTGCCGAGGCCGGAAGAGCCGTGAGAGAGCCGGGTCCCTGTCCCCGGACCGGGCACTGCCG
CCGCCCCTTGCCCAGCGCTCGCGTCTTCGCGGCGCCGCTTCAGCGCCAATATTCCGGAGAGCAA
GCGTTACGCGGCGGCGGCGGGGCCCGGAGCGGGAGGCGCCGGGGACCGGGGCGAGGCGGCCCCC
GCCGCCGCCATGGAGGCGCTGGGACCCGGACCTCCAGCCAGCCTCTTCCAGCCACCCCGGCGTC
CTGGCCTTGGCACTGTTGGGAAACCAATCCGACTGTTAGCCAATCATTTTCAGGTTCAGATTCC
TAAAATAGATGTGTATCACTATGATGTGGATATTAAACCGGAAAAACGGCCTCGTAGAGTCAAC
AGGGAGGTAGTAGACACTATGGTGCGACACTTCAAGATGCAGATATTTGGAGATCGGCAGCCTG
GCTATGATGGCAAAAGAAACATGTACACAGCACATCCACTGCCAATCGGACGGGATAGGGTTGA
TATGGAGGTGACCCTCCCAGGTGAGGGCAAGGACCAAACGTTCAAAGTGTCAGTGCAATGGGTG
TCAGTTGTGAGCCTTCAGCTGCTTTTAGAAGCTTTAGCTGGACACCTGAGTGAAGTCCCAGATG
ACTCAGTACAAGCCCTTGACGTGATTACAAGGCATCTCCCCTCTATGAGGTACACTCCAGTAGG
CCGGTCTTTTTTCTCACCTCCTGAAGGTTACTACCACCCTCTGGGAGGGGGCAGAGAGGTCTGG
TTCGGCTTTCACCAGTCTGTGCGCCCTGCCATGTGGAAGATGATGCTCAACATTGATGTATCTG
CAACTGCTTTCTACCGGGCTCAGCCCATCATTGAGTTCATGTGTGAGGTTTTAGACATCCAGAA
CATCAACGAGCAGACGAAACCTCTAACAGACTCCCAGCGTGTCAAGTTTACCAAAGAAATCAGG
GGTCTTAAAGTTGAGGTGACTCACTGTGGACAGATGAAACGAAAATATCGAGTTTGTAATGTGA
CAAGACGACCAGCCAGTCATCAAACCTTCCCTTTGCAGCTAGAAAATGGTCAAGCTATGGAATG
TACAGTAGCTCAGTATTTTAAGCAAAAATATAATCTGCAGCTGAAATACTCCCATCTTCCCTGC
CTTCAAGTGGGACAAGAGCAAAAGCATACATACCTGCCACTTGAGGTCTGTAATATAGTAGCAG
GGCAGAGATGTATAAAGAAGCTCACAGACAACCAGACATCCACCATGATCAAAGCCACAGCGAG
ATCTGCTCCTGACAGACAGGAGGAAATCAGTAGACTGGTGAAGAGCAACAGCGTGCTGGGTGGA
CCTGACCCATACCTGAAGGAATTTGGGATCGTTGTGCACAATGAGATGACGGAACTCATGGGCA
GGGTGCTTCCGGCGCCAATGCTGCAGTATGGAGGCCGGAATAAAACAGTAGCCACACCCAACCA
GGGTGTCTGGGACATGCGAGGAAAGCAGTTTTATGCTGGCATTGAAATTAAAGTATGGGCAGTG
GCTTGTTTTGCGCCTCAGAAACAATGTAGGGAAGATTTGCTAAAGAGCTTCACTGACCAACTTC
GTAAAATCTCCAAGGATGCAGGGATGCCCATCCAGGGTCAACCATGTTTCTGCAAATATGCTCA
AGGTGCAGACAGTGTGGAGCCCATGTTTAAACATCTGAAAATGACATATGTGGGCCTGCAGCTA
ATAGTGGTGATTTTGCCTGGGAAGACACCAGTATATGCGGAGGTGAAGCGTGTTGGAGATACCC
TCCTAGGTATGGCCACGCAGTGTGTCCAGGTCAAAAATGTTGTGAAGACCTCGCCACAAACCCT
TTCCAACCTTTGTCTGAAGATAAACGCAAAGCTTGGAGGAATTAACAACGTACTTGTGCCTCAT
CAAAGGCCCTCAGTGTTCCAGCAGCCTGTCATCTTCCTGGGAGCAGATGTCACTCATCCACCTG
CTGGGGATGGGAAGAAGCCTTCTATTGCAGCGGTGGTGGGCAGCATGGATGGCCATCCCAGTCG
GTACTGTGCCACTGTCCGGGTGCAGACATCTCGCCAGGAGATTGCCCAGGAGCTCCTGTTCAGT
CAGGAGGTCGTGCAGGACCTGACGAGCATGGCTCGGGAGCTGCTGATTCAGTTCTATAAGTCCA
CGCGCTTCAAGCCCACGCGTATCATCTACTACCGCGGAGGGGTATCCGAGGGACAGATGAAACA
GGTAGCTTGGCCAGAACTAATAGCAATTCGAAAGGCATGTATAAGTCTGGAGGAAGACTACCGG
CCAGGAATAACCTACATTGTGGTACAAAAGCGACATCACACACGACTCTTCTGTGCAGATAAAA
CAGAAAGGGTGGGGAAAAGTGGCAATGTCCCAGCAGGCACTACGGTGGATAGCACCATCACACA
TCCATCGGAGTTTGACTTTTACCTCTGCAGTCATGCAGGAATTCAGGGAACCAGTCGTCCTTCA
CATTACCAGGTCCTGTGGGATGACAACTGCTTTACCGCGGATGAACTGCAGCTGCTGACCTACC
AGCTCTGCCACACCTACGTGAGGTGCACACGCTCAGTCTCCATTCCTGCCCCTGCATATTATGC
CCGGCTTGTAGCATTCCGGGCAAGGTATCATTTGGTGGACAAAGATCATGACAGTGCGGAAGGC
AGTCACGTGTCAGGACAGAGCAACGGCCGGGATCCTCAAGCCTTGGCTAAGGCGGTGCAGATCC
ACCATGATACCCAGCACACTATGTATTTTGCCTGAGAGTCTTGGAAAAGAACTCAACCAATTTG
GCATCCCACGCATCCTCAAAATGTTTCAGATGCCTACTGCCTCTCTTAGTGCACAGTGATTTCA
GGTGGTCCCTACCAGCAGCTCAGAAAAGTTGCACTGAATCTGTACTCTGTAGCCCTGTCTGATG
CATCAACAAAATCGAGCCTTTTTTTTTTTTTAAGAAATAGATACTCATAGATTATGTTTTCTGA
TGCACTGGGCAGAATTTTTACCTCAACGTGCGAAGGCTGATTAGCCTTGACTTTCTAAAGGACT
TTCCAAGAAGGGTTTCTGTGGAATATTTTGCTAGCTGTGGTATTCACCGCATCTAGTCTTATAA
GAGGAGTATTTCCTTTTTTCTGTGTTATTGACTGGAGTGTGTACATAAGAACATTTGGAAGAGA
GAAACCAAACGACCTGGATCATTTCCATGTAACTTTTTAATTGAGTGGGTCCGTAGACTTCTTA
ATGGAGATTTCTTACTTTGCCACTGCAAATGCCTTTGAGGAGCATTAAGTTTTGAAAGTTTTCC
AGAACTCTGTTACCTTCACTGCGTTATCTGACTGACCTCTCCGGGCCTGCGCTGTAGAGTACAG
GCTGCCTGGTGATTGCACTAATACTTGGCTGAGATTTGAACAGGCAGCTCCCTTCCTTGGCTGG
CTTTTGTGAATCTGTGACATAAGCAGATGTGATGTGTGTCACAGGGACAGATAACACTGCCAAT
GGTAAAAAGTACCCATGTTCTCCATATTTGGGAAAAAAAAGAATTAGTTTTTAGTATTTTTCCA
CATTTTCAAAAGTGCCCATTTTATGCTGCTGTGTGGTGTGTTAGATCTAAACGATCTTTAAACT
TCTCTCATAGAAAATTAACTTTGGCAATAAGCATTTTTAAGGTCTCTGCTCTTTTTCCTCCTGA
CATAGTTTTCTAGATAAGATTTCAGTATGATTTTATCAACTATTTCTTGTATCTCATAACTGGG
ATATTCTGAAACCAGTTTATAAAGACATGGATTTCCATGTCCTTTAAATAATTGTTTTTTTAAA
AAACAAAACAAACCTATTTTATAGTCAGTGTCCTGTCACTTTAAAAAAAAAAAAAAGCTGGAAC
CAGGATGCTTTCTGATTGGTCAGGCTTTGCTGACGTATAAGGCTCATTGAGCAGTACTGCACTT
GAAAAGAAAGTACCAGCCAGTAAAAAAATAGTTTCCCTGGGAATCAAGGCTGCACACACAGCTG
CTTACAAGACAGCCTGAAGTGTGCTTGGCTTTGCCCATCTCTCTCTCAACTAAAACTCTGTAGA
AGTTGATTTTTTTTTCTCTCTCTCTGTAATAGATTCTGGATTCCCTCACAGGAAGACAGGACTT
CTTTTCTTGTCGTAACAAAGGGAGTTGATGTAAAGCAAGTATCAGTTAGAATGAAGGGAAAATG
TATCCTGTATTTAGTGTAGATAGTACTTGGTAAAGGACAAGCGTTACATAGTCAAGGTAGTCCT
ACCTGCGGTTTCCAGCGCACAGTTACTCCAACCTGGAAGGGTAAGGAGTGAAAGGCAAGAGGCT
CTATGTAGAGCCACACTCCTCATGGCTGAGGAGGGTGCTGGGAAGAGACAGACGCAATATGCTA
GAGTCAATTTTGCAGTCTCTCTGTAGAAACCGTTGGTGGGAAACACTGGGTCAGATGATAAAGG
GTGTTTGCTTGAACCCTTTAGTTGGTCCAAGGTCCAAATCTGTTAAACGGGCCCTCTCAATCCC
AGCAATATAAAACACTGTTTCCCTTCAGTCTTTTAAACAAGTGTGTAGATACATTAAATGTTTA
CATTTCCGTGTGCTGTCGTCGCTCAGCGGTGCCACCAGTGTTTGCTGAGACTGGTCTCCAAGAG
AGTTTCCAATGTCCATCTAATCCTATAGCACGTGAGGGTGGGTGCAGACCCCCTTAATCTGCAG
ACCGTGGGAAAAAGCAAGTCCTGAGGCTGAAGCACAACATAGCAGTGAAGAGACAGCAGACGTC
TGTTCTCTGAGATTTTCCTTTTCTGCAAATACCTCACATGGATTATACAAATCAGGACATGTTG
ATGAATGGCTGACTGCCACTTTTATTCACACCTGTTCAGGGAAAGCACAGAAAATACTCTGCAG
CCCAGCCACTCTGGACCCAAGAAGAGGGAAAAAACAAAAGGAAGCTTTTTCAGAAAAAGGAAAA
CTTGCCTGGAGTCTGTGAGGCGAAGAACCAAGAGGGGGCTGGCAGCTAGCCAGAGGGCACCGTA
CCTGCACTGGAGTGCCTAGGGCTCGCTTGTTAACAATACACAGAAGAAACTCTTGGGATCTTCC
GACATAATGGAACAGTGAGCAAGCCGTGTGCCCAGACGCTCCATCCACCTTCCCGCAGTTGGCT
TCGAGGTTTGCCCATGAACAATGTATCTGAATATACCGTCAGCCCTCGTATGCAAGGCCCTGGG
TTCGGTCCCCAGCTCCGGAAAAAAAGAACCCNAAAAAAAAAAAAAAAAAAAAAAAACAACAGAA
TTGCAGTCATACCATCGCAAGCCAATCTGAATGCATAGTTTTAATTGAACAAGAGTTGGCAATT
CAAATAGATACCCCCCCCCCAAAACTGACTGAATTGTTATGCATGTGTCAATCAATGGGAGGTG
TGCATTCTCTAGAAGTAGAATTAGGTTGTTTGGTTTTTTAAAACACAGCCTATTTAGGTCCTGT
CATATAGCGAGGAAGATTTCAGTGTAGCGACTCTAAGGAGTGACTATTTGGGGCTAAGGAGCAC
AGGACCTTACGGATGGGAAAGGCCCAGATGTCGAACCAATTATGTTTTGTTGTTGTTGATGTGT
TGTCGTTAGTTGTTGAAACCCGAGCTGTTTATAAAGGGAAGCAGCCGGCTTGGTGTAGCCAGTG
TTCTGGGCAGGTGAACCACATTCATTCTCGCTGTAAATTCTACGTGCTGCTTCCAAAGGCGATG
GTTCACAAGCAGGTGTGGCCTAAGTGGTCTGTACCTTAGGATCTGGTGTCTGGCCCATATCCTA
CATGAAAACCTGCCCACCTGGCTCAGCTACCCACTCCTTCCCATGGACAAAGATAAAGCACTGT
TTTAACCAGGCTCACCCCGTCTCCCCCGCCATGGTTACCCTCCCTCCGAGGACGCTCTGAGACT
CCCTTGCTTAGTACAAGGTGGCTGCTCTGCTTTCATTTTGAGAAAGCAGAGGTTAGGGCGGGCG
CCATATTAATACTGCTTCAACATCAACCATTTTCTTACCCCTTCCTGCCGACACTCACATTCTT
TCTGCATCCACCAGCCAAAAGTGCTTGTGTTCATCTGACCGATGGTGTGGTTTCTGTTTCTGTA
TGCTTAGACTTGTAATGCTTTAAAATGCATTTTACTAATTTGGACTGGATGTCTGTCTCCAGCG
ATGCGAGGTACTTTCTAAGCTATGAAGGAAGGGTTTGTATCCTTATGTGAGATGAGTAACGGTT
GTTTAAATTTTGCAGAGGTTCTTGTTACTGTTACTGGTTTGGGGTTTTTTGGTTTTTGGGGGGG
GTTTTGTTTGTTTGTTTGTTTGTTTGTTTTGGCTTGCAGGGATATTTTGTGTTCATGTGTCTGA
AAAGTGGGGAGGGGAATAAATGGCATTCTTGTGCTAAAGGTTGTCTTTGTCATCAGTTGTCTAA
TAAATATGGAGTACACTGTAATGACATCATACATAGGTACTTTAAACAAGATCATCTATTTGAG
AAATTGGACAAAAAATAGAGAGGTGTGTTTAACTTCTGGGTCTTCTTATATTTAGGAGTTGCCA
CTTGGGAACTTTTGAAGGACTCCAGGAACACTTCACATACAGAAACTCTGGCAATACTCGTCAA
GGTTCTAGGTACTGCTCTTTGTTTTTTTAAGAATAAAATAAGTCTTTATTTATAGTCTTGTAGT
AAAGGGGAAGCCTTAACTTGCAGGACAATTCCTGGGCAGTAGCACAGCATACTTTTTATTTCCA
TGGGATGGAATCAAACCCCGACTGAGACTACAAAGTATACACTAGAAGTCAGCAAATGCTGGCA
ACAGAGTAGGAAAAAGACAAAGAAATGAAGCC

hide sequence

RefSeq Acc Id:

XM_039109632 ⟹ XP_038965560

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	5	138,780,450 - 138,825,889 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100156	(Get FASTA)	NCBI Sequence Viewer
	XP_006238924	(Get FASTA)	NCBI Sequence Viewer
	XP_038965560	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL80460	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001100156 ⟸ NM_001106686

- UniProtKB:

F1LUQ5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MKRKYRVCNVTRRPASHQTFPLQLENGQAMECTVAQYFKQKYNLQLKYSHLPCLQVGQEQKHTY
LPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVKSNSVLGGPDPYLKEFGIV
VHNEMTELMGRVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCRE
DLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKMTYVGLQLIVVILPGKTPV
YAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQRPSVFQQPVI
FLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQEIAQELLFSQEVVQDLTSMA
RELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITYIVVQKR
HHTRLFCADKTERVGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPSHYQVLWDDNCF
TADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDSAEGSHVSGQSNGRD
PQALAKAVQIHHDTQHTMYFA

hide sequence

RefSeq Acc Id:

XP_006238924 ⟸ XM_006238862

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEALGPGPPASLFQPPRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNREV
VDTMVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSVQWVSVV
SLQLLLEALAGHLSEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGF
HQSVRPAMWKMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKFTKEIRGLK
VEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLENGQAMECTVAQYFKQKYNLQLKYSHLPCLQV
GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVKSNSVLGGPDP
YLKEFGIVVHNEMTELMGRVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACF
APQKQCREDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKMTYVGLQLIVV
ILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQRP
SVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQEIAQELLFSQEV
VQDLTSMARELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGI
TYIVVQKRHHTRLFCADKTERVGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPSHYQ
VLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDSAEGSHV
SGQSNGRDPQALAKAVQIHHDTQHTMYFA

hide sequence

RefSeq Acc Id:

ENSRNOP00000029180 ⟸ ENSRNOT00000035373

RefSeq Acc Id:	XP_038965560 ⟸ XM_039109632
- Peptide Label:	isoform X2

Protein Domains

PAZ Piwi

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Strain Variation

Strain Sequence Variants (Rnor 6.0)

ACI/EurMcwi (MCW)

Visual

CSV

TAB

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

ACI/EurMcwi (RGD)

Visual

CSV

TAB

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

ACI/N (MCW)

Visual

CSV

TAB

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

BBDP/Wor (RGD)

Visual

CSV

TAB

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

BN/SsN (MCW)

Visual

CSV

TAB

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

Buf/N (MCW)

Visual

CSV

TAB

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

COP/CrCrl (MCW & UW)

Visual

CSV

TAB

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob) University of Wisconsin (Dr. James Shull)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Charles River Laboratories
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob) and UW Madison (Dr. James Shull)

F344/NCrl (RGD)

Visual

CSV

TAB

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

F344/NRrrc (MCW)

Visual

CSV

TAB

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

FHH/EurMcwi (MCW)

Visual

CSV

TAB

Printer

Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

FHH/EurMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

FHL/EurMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

FHL/EurMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

GH/OmrMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

GK/Ox (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LE/Stm (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LEW/Crl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LEW/NCrlBR (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LH/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LL/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LN/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

M520/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

MHS/Gib (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

MNS/Gib (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

MR/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

SBH/Ygl (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	SBH/Ygl sequenced by MCW

SBH/Ygl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SBN/Ygl (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	SBN/Ygl sequenced by MCW

SBN/Ygl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SHR/NHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SHRSP/Gcrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SR/JrHsd (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Harlan Laboratories
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

SR/JrHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SS/Jr (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SS/JrHsdMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

SS/JrHsdMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WAG/Rij (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/Gcrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

WKY/NCrl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/NHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WN/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

Damaging Variants

Assembly: Rnor_5.0

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain
5	148315511	148315512	G	C	snv	F344/Jcl (KyushuU)
5	148318683	148318684	G	A	snv	BDIX/NemOda (KyushuU), F344/DuCrlCrlj (KyushuU)

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1304583	AgrOrtholog
Ensembl Genes	ENSRNOG00000025596	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000029180	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000035373	ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH	3.30.420.10	UniProtKB/TrEMBL
InterPro	ArgoL2	UniProtKB/TrEMBL
	Argonaute_Mid_dom	UniProtKB/TrEMBL
	PAZ	UniProtKB/TrEMBL
	PAZ_dom_sf	UniProtKB/TrEMBL
	Piwi	UniProtKB/TrEMBL
	RNaseH-like	UniProtKB/TrEMBL
	RNaseH_sf	UniProtKB/TrEMBL
KEGG Report	rno:298533	UniProtKB/TrEMBL
NCBI Gene	298533	ENTREZGENE
Pfam	ArgoL2	UniProtKB/TrEMBL
	ArgoMid	UniProtKB/TrEMBL
	PAZ	UniProtKB/TrEMBL
	Piwi	UniProtKB/TrEMBL
PhenoGen	Ago4	PhenoGen
PROSITE	PAZ	UniProtKB/TrEMBL
	PIWI	UniProtKB/TrEMBL
SMART	Piwi	UniProtKB/TrEMBL
Superfamily-SCOP	PAZ	UniProtKB/TrEMBL
	RNaseH_fold	UniProtKB/TrEMBL
UniProt	F1LUQ5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-03-26	Ago4	argonaute RISC component 4	Ago4	argonaute RISC catalytic component 4	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2018-12-04	Ago4	argonaute RISC catalytic component 4	Ago4	argonaute 4, RISC catalytic component	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2015-12-02	Ago4	argonaute 4, RISC catalytic component	Ago4	argonaute RISC catalytic component 4	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-03-13	Ago4	argonaute RISC catalytic component 4	Eif2c4	eukaryotic translation initiation factor 2C, 4	Name and Symbol changed	629549	APPROVED
2008-04-30	Eif2c4	eukaryotic translation initiation factor 2C, 4	Eif2c4_predicted	eukaryotic translation initiation factor 2C, 4 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Eif2c4_predicted	eukaryotic translation initiation factor 2C, 4 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

RGD Manual Annotations