Tex11 (testis expressed 11) - Rat Genome Database

Name: Tex11
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Tex11 (testis expressed 11) Rattus norvegicus

Analyze

Symbol:

Tex11

Name:

testis expressed 11

RGD ID:

1560239

Description:

Predicted to be involved in meiotic gene conversion and meiotic nuclear division. Predicted to act upstream of or within several processes, including fertilization; male gonad development; and meiotic nuclear division. Predicted to be located in condensed nuclear chromosome. Predicted to be active in central element. Predicted to colocalize with synaptonemal complex. Human ortholog(s) of this gene implicated in X-linked spermatogenic failure 2. Orthologous to human TEX11 (testis expressed 11); INTERACTS WITH acrylamide; bisphenol A; trichloroethene.

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LOC501588; RGD1560239; similar to testis protein TEX11; testis expressed gene 11; testis-expressed protein 11; testis-expressed sequence 11 protein

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TEX11 (testis expressed 11)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Tex11 (testis expressed gene 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tex11 (testis expressed 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TEX11 (testis expressed 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TEX11 (testis expressed 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tex11 (testis expressed 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TEX11 (testis expressed 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TEX11 (testis expressed 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	HKDC1 (hexokinase domain containing 1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	TEX11 (testis expressed 11)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tex11 (testis expressed gene 11)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tex11 (testis expressed 11)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tex11	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	X	65,932,904 - 66,196,525 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	65,932,988 - 66,196,187 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	X	70,670,212 - 70,946,621 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	70,670,322 - 70,946,565 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	71,541,991 - 71,810,851 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	88,852,071 - 89,124,940 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	66,291,197 - 66,553,544 (-)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

FG Syndrome 1 (ISO)

genetic disease (ISO)

intellectual disability (ISO)

spermatogenic failure 3 (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

X-linked spermatogenic failure 2 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,3,7,8-tetrachlorodibenzodioxine (ISO)

acrylamide (EXP,ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

bisphenol A (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

chloroprene (ISO)

chrysene (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dioxygen (ISO)

glyphosate (ISO)

lipopolysaccharide (ISO)

ozone (ISO)

paracetamol (ISO)

perfluorononanoic acid (ISO)

phenobarbital (ISO)

propanal (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sulforaphane (ISO)

tetraphene (ISO)

trichloroethene (EXP)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (ISO)

chiasma assembly (ISO)

ectopic germ cell programmed cell death (ISO)

fertilization (ISO)

male gonad development (ISO)

male meiosis chromosome segregation (IBA,ISO)

male meiotic nuclear division (ISO)

meiotic gene conversion (ISO)

negative regulation of apoptotic process (ISO)

negative regulation of developmental process (ISO)

negative regulation of reproductive process (ISO)

reciprocal meiotic recombination (IBA,ISO)

resolution of meiotic recombination intermediates (ISO)

synaptonemal complex assembly (IBA,ISO)

Cellular Component

central element (IBA,ISO)

chromosome (ISO)

condensed nuclear chromosome (ISO)

synaptonemal complex (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:18316482	PMID:18369460

Genomics

Comparative Map Data

Tex11
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	X	65,932,904 - 66,196,525 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	65,932,988 - 66,196,187 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	X	70,670,212 - 70,946,621 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	70,670,322 - 70,946,565 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	71,541,991 - 71,810,851 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	88,852,071 - 89,124,940 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	66,291,197 - 66,553,544 (-)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

TEX11
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	70,511,227 - 70,908,711 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	70,528,940 - 70,908,711 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	69,748,790 - 70,128,561 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	69,665,515 - 70,045,292 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	69,531,811 - 69,911,588	NCBI
Celera	X	70,102,128 - 70,481,892 (-)	NCBI		Celera
Cytogenetic Map	X	q13.1	NCBI
HuRef	X	63,570,222 - 63,946,918 (-)	NCBI		HuRef
CHM1_1	X	69,642,982 - 70,022,944 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	68,944,548 - 69,342,011 (-)	NCBI		T2T-CHM13v2.0

Tex11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	99,882,254 - 100,103,245 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	99,882,254 - 100,103,273 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	100,838,648 - 101,059,639 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	100,838,648 - 101,059,667 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	98,033,987 - 98,254,978 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	97,041,382 - 97,262,356 (-)	NCBI		MGSCv36	mm8
Celera	X	87,757,813 - 87,978,718 (-)	NCBI		Celera
Cytogenetic Map	X	C3	NCBI
cM Map	X	43.72	NCBI

Tex11
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955475	10,057,708 - 10,432,087 (-)	NCBI	ChiLan1.0	ChiLan1.0

TEX11
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	X	70,209,222 - 70,589,402 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	59,796,821 - 60,175,517 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	69,854,724 - 70,233,320 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	69,877,751 - 70,233,320 (-)	Ensembl	panpan1.1		panPan2

TEX11
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	54,958,568 - 55,268,720 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	54,958,568 - 55,268,684 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	45,785,536 - 46,095,706 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	55,925,736 - 56,237,095 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	55,925,746 - 56,237,295 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	53,894,626 - 54,205,732 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	55,225,705 - 55,537,330 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	55,152,649 - 55,464,187 (-)	NCBI		UU_Cfam_GSD_1.0

Tex11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	46,936,535 - 47,207,324 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936762	681,130 - 969,455 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936762	681,962 - 969,749 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TEX11
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	56,544,560 - 56,925,779 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	56,543,933 - 56,925,104 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	63,739,029 - 63,908,047 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TEX11
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	60,378,774 - 60,698,158 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666065	2,214,985 - 2,557,881 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in Tex11
445 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	40
Count of miRNA genes:	36
Interacting mature miRNAs:	38
Transcripts:	ENSRNOT00000041731
Prediction methods:	Miranda, Pita, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61430	Cia18	Collagen induced arthritis QTL 18	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	X	14843113	120568734	Rat
1598837	Memor13	Memory QTL 13	3.2		exploratory behavior trait (VT:0010471)	difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	41052407	146860749	Rat
738035	Stresp1	Stress response QTL 1	4.96	0.000011	stress-related behavior trait (VT:0010451)	defensive burying - coping	X	41304447	112935181	Rat
61431	Cia19	Collagen induced arthritis QTL 19	4.4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	X	65612192	120568734	Rat

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium											7
Low	2	2	12	2	17	2	1	2	5	6	23	10	1
Below cutoff	1	8	18	12	1	12	7	8	17	10	9		7

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_001069708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	MK862683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000041731 ⟹ ENSRNOP00000048393

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	65,932,988 - 66,187,937 (-)	Ensembl
Rnor_6.0 Ensembl	X	70,670,554 - 70,938,489 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000076351 ⟹ ENSRNOP00000068056

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	65,932,988 - 66,196,187 (-)	Ensembl
Rnor_6.0 Ensembl	X	70,670,322 - 70,835,089 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000076819 ⟹ ENSRNOP00000068490

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	X	70,866,470 - 70,946,565 (-)	Ensembl

RefSeq Acc Id:

XM_008773302 ⟹ XP_008771524

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	X	65,932,904 - 66,196,525 (-)	NCBI
Rnor_6.0	X	70,670,212 - 70,946,621 (-)	NCBI

Sequence:

show sequence

AGAACATGACTAGCTGTGACAGAGCCCTGAACCTCGCCTTCCGGCCTTGGGCCGTTGGGCCGCC
AGAGACGAGCAAGCTTTTCGGTTGCGGGACAGCAGAAACCTCTCTCCTTAACAACGTTTCTCCT
GGATTTTCAGCTTCCTCAACTTCCCTGTACTTTTAGGCTGGATCCGGACATTTAATACATGGAT
GGCATTGCTGACCTTAGCATCATGGACTTTAAAGAAGTTATTAAAACCATGATCATAACTGGAA
ATTCATGGAGACTACATGAAATGATTGACAAATTCTTCATGAACATATCAAATTTCAACAGGAA
GTCTCTGACTGAAGTACAGAATATTCAGATTGAAGAAATTGCAGTGAACCTGTGGAACTGGGCA
ACAGCTAAGAGACTAGAACTGTCTGTGAGGAAAAGTCAGGCAGCTAAACTGTGTTACATTGCTT
GCAAGCTGGTATGTATGCATGGAGTCTCAGTTTCTTCAGAAGAAGCTATTCAAAGACAGATTTT
GATGAATATGAAAACAGGAAAACAATGGTTGGATACTGGAAATGCTCAGATTGCTGATGAATTT
TTTCAAGCTGCCATGGCTAATCTGGAGAAATTATATAGCAGATTAATGCAGAGCTGCCACACTG
AGACTAACTTGTCCCTGTATAAGAACACGGTGGAGAAGGGCATCTTCCATGTGCTTTCTTACCA
AGCTGAGTCAGCTGTTGCTCAAGGGGATTTCAAGAAAGCATCTATTTGCGTCTTACGTTGTAAA
GATATGCTGATAAGGATTCCTGAAATGACAAAATATCTTCATGTACTCTGTTACAACTTTGGAG
TAGAATCGAGCAAGCAGAATAAATACAGAGAGAGTTCATTCTGGCTTAGCCAAAGCTATGATAT
TGGGAAGATGGGTAAAGATTCTGTTGAGCCAGAAATGCTGGCGAAAGGTCTGCGGCTACTTGCC
ACTATTTATTTGAACTGTGATGACGAAGCATATTATAACAAGGCCCTCATTGCTGTAATTGTCG
CTAACAAGGAGCATTTAGATCCAGCTGGGCTTTTCTTAAAGATGCGGATCCTCATAAAAGGGAA
AGCATTCAATGAAGAACTCCTTGAAGCTGCTAAGGAAGTGCTGTATCTTGCTATGCCTTTGGAG
TTCTGTCTGAGCATTATTCAATTCCTGATAGATAATAAAAGAGATTCTGTTGGGTTTTGCTTTC
TGAAGATCATCGCTGATCATTTTAAGTTGCCAGAACATAGAAAGAGAATTCTGTTGTTCTACAT
TGACATGCTTTTACAAGTGGACCAAGATGTGATTGCTGAAGAGAAGATTAAAGAAATACTTATA
GATCACCAAACAAGAAGTCGACTGACAAGAGCTTTAGTAAATTGGTTACACAACATTCTGTGGG
GAAAAGCCACCAGATGTGTTAAGGTCCAAAATTATGCTGATGCCCTACGCTGGTACAGTTATTC
TCTGAAGTTGTATGAATGTGATCAAGCGGATATGGATTTGGTCAAGCTGAAGAGGAACATGGTT
TCTTGCTACTTATCTTTGAAACAACTTGATAAGGCTAAAGAGGCCTTGGCAGAAGCTGAGCAAC
AGGATCCTACAAACATTTTCACTCAGTATTATATATTCAAGATTGCAATCTTGGATGGTGAAGC
CTACAGAGCTTTACAGATAGTCAGTGCTTTAAAAATTTCAATGGAGGAAGACTCAGAAGATTGT
GGACTAATTGAAAATGGAGTTTCAACTCTCAGAATCCTAAGTTTATGTGTAGAGTTTGCTCTAG
AGAATGAACAACAATTTGTGGCACAAAAAGCTTTGGAATATTTAATTCAACTTTCAAAAGACCC
AAGAGAAGTACTTGAAGCTTTAAAGTGTCTCGTTCGAATTATTCTTCCACAAGCTTTTTACTTG
CCAGAATCTGAAATTAAAAAGAAAGAAATGAATAGACTTTTGAGTTACTTGGATACAGCACTCC
TGAAATTTTCTCAACATTTTGATGACACTTCCTCAACTTTGGATCCTATGGTTAATGATGCCAA
TTGGTTCAGGAAAATAGCTTGGAACTTAGCTCTGCAATCTGAGAAGGATCTAGAGAAAATGAAA
AACTTTTTCATGATTTCTTATGAGCTGTCCCTTTTTTGTCCTTCGGATCAAGGACTACTGATTG
CACAGAAAACATGTTTACTTGTAGCAGCTGCAGTTGATCTAGAGCAAGGAAGAAAAGCTACAAC
AACTTATGAACAGAACAAGTTACTAAGAATGGCACTTGAGCAGATCCAGAAATGCAAAAATGTT
TGGAATCTCCTGAAACAAACAGGAGATTTCTCAGGTGATGACTGTGGGGTAATGCTTCTGCTGT
ATGAATTTGAAGTTAAAACCAAAACCAATGATCCATCCCTGCACAGCTTTCTGCAATCAGTTTG
GAAGATGCCTGGTTTAGAAAGCAGAACACTTGAAATAATGGCATCACTAGCTATGGATAAACCT
GCACACTATCCTACTATTGCACAGAAGGCCTTGAAAAAACTTTTATTGATCTATAGAAGGAAAG
TGCCAATTAATGTTTTGAGATACAGTGTATGCATGCACAACTTGATTGACCTTCTGGTGTCAGA
TAGAAGATGGAATATGGCACTGTATCCCCTAAAAGAAGTTTGGGGCCATTTAAAAAGTGCTCTG
AGTCTCATTCGCCAAACCAAAGGCTACCCAGAAGAGGAGATTGTATGGCTAATGATCAAGGCTT
GGAATATTGGAATATTGATGTATAGCAGGAACAAGTATATATCTGCAGAAAGGTGGGCAAGAAT
GACTTTGGAGTTCCTTGACCACCTTGGCTCCCTCAAAACAAATTATGAAGCAAAGATGAAACTT
TTATATGCCAACCTCATGGAAGCATTAGATGAAAGGTTGGATTTAAGGTCTCCAGAGATGACTG
AACGGATAAGAGCACTTGCTGTTCCTCCAGAGGGCCAAGGTTCAGTTCCCAGCACCAACATGGC
AGCTCACAACCATCTGTAACTCCAGTTCCAGGGGATCTGACACTGTCTTCTGGTCACTACGGGT
ACCACGGTGCATGTGCATAAAATTAAAGTGTGATTTCACTTCTCAGTGAAGAGTGATAATGATT
GGAGGAAATTGTAGAAAGGAGGTGTATATTCATGAGCTGGTAAATATTTCACTGTTACATGTTC
CTTTGAACCTTTGTTTTCTTAAGCCCTGTTCTTATGTTGACTAAAAGTTTCTCAAATAAAAGCA
TTT

hide sequence

Protein Sequences


Protein RefSeqs	XP_008771524	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL95919	(Get FASTA)	NCBI Sequence Viewer
	EDL95920	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000048393.6
	ENSRNOP00000068056
	ENSRNOP00000068056.2
GenBank Protein	QJF54192	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_008771524 ⟸ XM_008773302

- UniProtKB:

A0A096MJA6 (UniProtKB/TrEMBL), A0A6M3WAI1 (UniProtKB/TrEMBL), A0A9K3Y772 (UniProtKB/TrEMBL), D3Z868 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDGIADLSIMDFKEVIKTMIITGNSWRLHEMIDKFFMNISNFNRKSLTEVQNIQIEEIAVNLWN
WATAKRLELSVRKSQAAKLCYIACKLVCMHGVSVSSEEAIQRQILMNMKTGKQWLDTGNAQIAD
EFFQAAMANLEKLYSRLMQSCHTETNLSLYKNTVEKGIFHVLSYQAESAVAQGDFKKASICVLR
CKDMLIRIPEMTKYLHVLCYNFGVESSKQNKYRESSFWLSQSYDIGKMGKDSVEPEMLAKGLRL
LATIYLNCDDEAYYNKALIAVIVANKEHLDPAGLFLKMRILIKGKAFNEELLEAAKEVLYLAMP
LEFCLSIIQFLIDNKRDSVGFCFLKIIADHFKLPEHRKRILLFYIDMLLQVDQDVIAEEKIKEI
LIDHQTRSRLTRALVNWLHNILWGKATRCVKVQNYADALRWYSYSLKLYECDQADMDLVKLKRN
MVSCYLSLKQLDKAKEALAEAEQQDPTNIFTQYYIFKIAILDGEAYRALQIVSALKISMEEDSE
DCGLIENGVSTLRILSLCVEFALENEQQFVAQKALEYLIQLSKDPREVLEALKCLVRIILPQAF
YLPESEIKKKEMNRLLSYLDTALLKFSQHFDDTSSTLDPMVNDANWFRKIAWNLALQSEKDLEK
MKNFFMISYELSLFCPSDQGLLIAQKTCLLVAAAVDLEQGRKATTTYEQNKLLRMALEQIQKCK
NVWNLLKQTGDFSGDDCGVMLLLYEFEVKTKTNDPSLHSFLQSVWKMPGLESRTLEIMASLAMD
KPAHYPTIAQKALKKLLLIYRRKVPINVLRYSVCMHNLIDLLVSDRRWNMALYPLKEVWGHLKS
ALSLIRQTKGYPEEEIVWLMIKAWNIGILMYSRNKYISAERWARMTLEFLDHLGSLKTNYEAKM
KLLYANLMEALDERLDLRSPEMTERIRALAVPPEGQGSVPSTNMAAHNHL

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RefSeq Acc Id:

ENSRNOP00000048393 ⟸ ENSRNOT00000041731

RefSeq Acc Id:

ENSRNOP00000068490 ⟸ ENSRNOT00000076819

RefSeq Acc Id:

ENSRNOP00000068056 ⟸ ENSRNOT00000076351

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3Z868-F1-model_v2	AlphaFold	D3Z868	1-911	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1560239	AgrOrtholog
BioCyc Gene	G2FUF-2121	BioCyc
Ensembl Genes	ENSRNOG00000025672	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000041731.7	UniProtKB/TrEMBL
	ENSRNOT00000076351	ENTREZGENE
	ENSRNOT00000076351.3	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.10	UniProtKB/TrEMBL
InterPro	Meiosis_specific_SPO22	UniProtKB/TrEMBL
	TEX11	UniProtKB/TrEMBL
	TPR-like_helical	UniProtKB/TrEMBL
KEGG Report	rno:501588	UniProtKB/TrEMBL
NCBI Gene	501588	ENTREZGENE
PANTHER	PTHR47083	UniProtKB/TrEMBL
	TESTIS-EXPRESSED PROTEIN 11	UniProtKB/TrEMBL
Pfam	SPO22	UniProtKB/TrEMBL
PhenoGen	Tex11	PhenoGen
RatGTEx	ENSRNOG00000025672	RatGTEx
Superfamily-SCOP	SSF48452	UniProtKB/TrEMBL
UniProt	A0A096MJA6	ENTREZGENE
	A0A6M3WAI1	ENTREZGENE, UniProtKB/TrEMBL
	A0A9K3Y772	ENTREZGENE, UniProtKB/TrEMBL
	D3Z868	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A096MJA6	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-09-24	Tex11	testis expressed 11	Tex11	testis expressed gene 11	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-28	Tex11	testis expressed gene 11	RGD1560239_predicted	similar to testis protein TEX11 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1560239_predicted	similar to testis protein TEX11 (predicted)	LOC501588	similar to testis protein TEX11	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC501588	similar to testis protein TEX11			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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