Gene: Smc1b (structural maintenance of chromosomes 1B) Rattus norvegicus
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Symbol: Smc1b
Name: structural maintenance of chromosomes 1B
Description: Predicted to have DNA binding activity. Predicted to be involved in meiotic cell cycle and sister chromatid cohesion. Predicted to localize to the chromosome; cytosol; and nucleoplasm. Orthologous to human SMC1B (structural maintenance of chromosomes 1B); PARTICIPATES IN cell cycle pathway, mitotic; INTERACTS WITH 17alpha-ethynylestradiol (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog); aflatoxin B1 (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC300121; SMC; SMC (structural maintenace of chromosomes 1)-like 2 (S. cerevisiae); Smc1l2; structural maintenace of chromosomes 1B; structural maintenance of chromosomes protein 1B
Orthologs:
Homo sapiens (human) : SMC1B (structural maintenance of chromosomes 1B)  HGNC  Alliance
Mus musculus (house mouse) : Smc1b (structural maintenance of chromosomes 1B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smc1b (structural maintenance of chromosomes 1B)
Pan paniscus (bonobo/pygmy chimpanzee) : SMC1B (structural maintenance of chromosomes 1B)
Canis lupus familiaris (dog) : SMC1B (structural maintenance of chromosomes 1B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smc1b (structural maintenance of chromosomes 1B)
Sus scrofa (pig) : SMC1B (structural maintenance of chromosomes 1B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07125,966,480 - 126,028,287 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07125,680,603 - 125,742,470 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47123,078,896 - 123,140,078 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17123,113,384 - 123,174,335 (-)NCBI
Celera7112,479,432 - 112,540,909 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Smc1b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308791
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.