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Gene: H1f2 (H1.2 linker histone, cluster member) Rattus norvegicus
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Symbol: H1f2
Name: H1.2 linker histone, cluster member
RGD ID: 1587893
Description: Predicted to have chromatin DNA binding activity. Predicted to be involved in chromatin organization and negative regulation of transcription by RNA polymerase II. Predicted to localize to nuclear euchromatin and transcriptionally active chromatin. Human ortholog(s) of this gene implicated in acute lymphoblastic leukemia. Orthologous to human H1-2 (H1.2 linker histone, cluster member); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: Hist1h1c; histone cluster 1 H1 family member c; histone cluster 1, H1c; histone H1.2; LOC684681; similar to Histone H1.2 (H1 VAR.1) (H1c)
Orthologs:
Homo sapiens (human) : H1-2 (H1.2 linker histone, cluster member)  HGNC  Alliance
Mus musculus (house mouse) : H1f2 (H1.2 linker histone, cluster member)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : H1-2 (H1.2 linker histone, cluster member)
Pan paniscus (bonobo/pygmy chimpanzee) : H1-2 (H1.2 linker histone, cluster member)
Canis lupus familiaris (dog) : H1-2 (H1.2 linker histone, cluster member)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : H1-2 (H1.2 linker histone, cluster member)
Sus scrofa (pig) : H1-2 (H1.2 linker histone, cluster member)
Chlorocebus sabaeus (African green monkey) : H1-2 (H1.2 linker histone, cluster member)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01743,638,938 - 43,640,445 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1743,639,749 - 43,640,387 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01745,493,397 - 45,494,901 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1741,022,273 - 41,023,780 (-)NCBICelera
Cytogenetic Map17p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on H1f2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1587893
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.