Gene: Rif1 (replication timing regulatory factor 1) Rattus norvegicus
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Symbol: Rif1
Name: replication timing regulatory factor 1
Description: INVOLVED IN cellular response to DNA damage stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); chromatin silencing at telomere (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH congenital muscular dystrophy (ortholog); genetic disease (ortholog); melanoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); condensed chromosome (ortholog); female pronucleus (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; chloroprene; dibutyl phthalate
AGR Description: Predicted to be involved in several processes, including cellular response to leukemia inhibitory factor, positive regulation of cellular metabolic process, and regulation of nucleobase-containing compound metabolic process; predicted to localize to the intracellular organelle and plasma membrane; orthologous to human RIF1 (replication timing regulatory factor 1).
Merged Description: Predicted to be involved in several processes, including cellular response to leukemia inhibitory factor, positive regulation of cellular metabolic process, and regulation of nucleobase-containing compound metabolic process; predicted to localize to the intracellular organelle and plasma membrane; orthologous to human RIF1 (replication timing regulatory factor 1); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; non-homologous end joining pathway of double-strand break repair; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; chloroprene; dibutyl phthalate.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC295602; LOW QUALITY PROTEIN: telomere-associated protein RIF1; Rap1 interacting factor 1 homolog; Rap1 interacting factor 1 homolog (yeast); RAP1 interacting factor homolog; RAP1 interacting factor homolog (yeast); RGD1562474; similar to Rap1-interacting factor 1; telomere-associated protein RIF1
Orthologs:
Homo sapiens (human) : RIF1 (replication timing regulatory factor 1)  HGNC  Alliance
Mus musculus (house mouse) : Rif1 (replication timing regulatory factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rif1 (replication timing regulatory factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : RIF1 (replication timing regulatory factor 1)
Canis lupus familiaris (dog) : RIF1 (replication timing regulatory factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rif1 (replication timing regulatory factor 1)
Sus scrofa (pig) : RIF1 (replication timing regulatory factor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0337,599,540 - 37,648,818 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0342,697,416 - 42,746,743 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4333,574,934 - 33,624,794 (+)NCBIRGSC3.4rn4RGSC3.4
Celera334,698,698 - 34,747,822 (+)NCBICelera
Cytogenetic Map3q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rif1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562474
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.