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Gene: Ncaph (non-SMC condensin I complex, subunit H) Rattus norvegicus
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Symbol: Ncaph
Name: non-SMC condensin I complex, subunit H
Description: Predicted to have DNA topoisomerase (ATP-hydrolyzing) activator activity; DNA topoisomerase binding activity; and chromatin binding activity. Predicted to be involved in female meiosis chromosome separation; meiotic chromosome condensation; and mitotic chromosome condensation. Predicted to localize to the cytosol and nuclear condensin complex. Human ortholog(s) of this gene implicated in primary autosomal recessive microcephaly. Orthologous to human NCAPH (non-SMC condensin I complex subunit H); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-naphthyl isothiocyanate; 6-propyl-2-thiouracil.
Type: gene
RefSeq Status: MODEL
Also known as: LOC680089; similar to Condensin complex subunit 2 (Barren homolog protein 1) (Chromosome-associated protein H) (mCAP-H) (XCAP-H homolog)
Orthologs:
Homo sapiens (human) : NCAPH (non-SMC condensin I complex subunit H)  HGNC  Alliance
Mus musculus (house mouse) : Ncaph (non-SMC condensin I complex, subunit H)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ncaph (non-SMC condensin I complex subunit H)
Pan paniscus (bonobo/pygmy chimpanzee) : NCAPH (non-SMC condensin I complex subunit H)
Canis lupus familiaris (dog) : NCAPH (non-SMC condensin I complex subunit H)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ncaph (non-SMC condensin I complex subunit H)
Sus scrofa (pig) : NCAPH (non-SMC condensin I complex subunit H)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03119,583,798 - 119,611,148 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03126,108,995 - 126,136,392 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43114,651,251 - 114,679,447 (-)NCBIRGSC3.4rn4RGSC3.4
Celera3113,212,390 - 113,239,664 (-)NCBICelera
Cytogenetic Map3q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ncaph
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1596799
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.