Dnmt3c (DNA methyltransferase 3C) - Rat Genome Database

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Gene: Dnmt3c (DNA methyltransferase 3C) Rattus norvegicus
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Symbol: Dnmt3c
Name: DNA methyltransferase 3C
RGD ID: 150345282
Description: Predicted to enable DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates and metal ion binding activity. Predicted to be involved in several processes, including meiosis I; piRNA-mediated heterochromatin formation; and spermatogenesis. Predicted to be located in nucleus.
Type: protein_coding
Previously known as: ENSRNOG00000064796
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 Ensembl3142,178,533 - 142,210,954 (+)EnsemblmRatBN7.2 Ensembl
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IEA)

Molecular Function

References

Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences

Ensembl Acc Id: ENSRNOT00000099319   ⟹   ENSRNOP00000083712
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3142,178,533 - 142,210,954 (+)Ensembl
Protein Sequences
Ensembl Protein ENSRNOP00000083712.1
Ensembl Acc Id: ENSRNOP00000083712   ⟸   ENSRNOT00000099319
Protein Domains
PHD-type

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000064796 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000099319.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.150 UniProtKB/TrEMBL
  PWWP, helical domain UniProtKB/TrEMBL
InterPro ADD UniProtKB/TrEMBL
  C5_DNA_meth_AS UniProtKB/TrEMBL
  C5_MeTfrase UniProtKB/TrEMBL
  DNMT3_ADD UniProtKB/TrEMBL
  DNMT3_ADD_PHD UniProtKB/TrEMBL
  SAM-dependent_MTases_sf UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/TrEMBL
PANTHER DNA (CYTOSINE-5)-METHYLTRANSFERASE 3C UniProtKB/TrEMBL
  DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED UniProtKB/TrEMBL
Pfam ADD_DNMT3 UniProtKB/TrEMBL
  ADDz_Dnmt3b UniProtKB/TrEMBL
  DNA_methylase UniProtKB/TrEMBL
PhenoGen Dnmt3c PhenoGen
PROSITE ADD UniProtKB/TrEMBL
  C5_MTASE_1 UniProtKB/TrEMBL
  SAM_MT_C5 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000064796 RatGTEx
Superfamily-SCOP SSF53335 UniProtKB/TrEMBL
  SSF57903 UniProtKB/TrEMBL
UniProt A0A8I5ZZV1_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-01-06 Dnmt3c  DNA methyltransferase 3C  ENSRNOG00000064796    Symbol and/or name change 19259462 PROVISIONAL
2021-08-31 ENSRNOG00000064796        Symbol and Name status set to provisional 45752 PROVISIONAL