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Gene: Slx1b (SLX1 homolog B, structure-specific endonuclease subunit) Rattus norvegicus
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Symbol: Slx1b
Name: SLX1 homolog B, structure-specific endonuclease subunit
Description: Predicted to have 5'-flap endonuclease activity and crossover junction endodeoxyribonuclease activity. Predicted to be involved in DNA metabolic process and regulation of telomere maintenance. Predicted to localize to Slx1-Slx4 complex and nucleoplasm. Orthologous to human SLX1A (SLX1 homolog A, structure-specific endonuclease subunit); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: GIY-YIG domain containing 2; GIY-YIG domain-containing protein 1; Giyd1; Giyd2; LOC293489; LRRGT00058; MGC94602; RGD1311568; similar to RIKEN cDNA 4833422P03; SLX1 structure-specific endonuclease subunit homolog B; SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae); structure-specific endonuclease subunit SLX1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01198,114,514 - 198,120,061 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,112,245 - 198,120,061 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01205,093,513 - 205,099,060 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41185,843,372 - 185,848,919 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11185,993,259 - 185,998,800 (-)NCBI
Celera1178,943,666 - 178,949,213 (-)NCBICelera
Cytogenetic Map1q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slx1b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311568
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.