Cit (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 12 | 46,263,881 - 46,425,642 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 12 | 40,603,073 - 40,764,846 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 12 | 40,605,563 - 40,763,860 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 12 | 41,778,820 - 41,938,342 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 12 | 42,392,543 - 42,552,063 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 12 | 41,453,005 - 41,612,527 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 12 | 46,334,669 - 46,494,152 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 12 | 46,334,665 - 46,494,174 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 12 | 48,136,329 - 48,295,119 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 12 | 41,858,134 - 42,019,601 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 12 | 41,721,050 - 41,801,648 (-) | NCBI | | | | | Celera | 12 | 42,234,665 - 42,392,523 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | q16 | NCBI | | | | |
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CIT (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 12 | 119,685,791 - 119,877,320 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 119,685,791 - 119,877,320 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 120,123,596 - 120,315,124 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 118,607,981 - 118,799,475 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 118,586,317 - 118,777,812 | NCBI | | | | | Celera | 12 | 119,756,651 - 119,948,207 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | q24.23 | NCBI | | | | | HuRef | 12 | 117,131,727 - 117,325,161 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 120,091,103 - 120,282,752 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 119,673,075 - 119,864,647 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Cit (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 5 | 115,983,284 - 116,147,012 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 115,983,337 - 116,147,006 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 115,845,224 - 116,008,953 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 115,845,278 - 116,008,947 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 116,295,665 - 116,456,352 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 116,106,655 - 116,267,342 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 112,946,512 - 113,107,010 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | F | NCBI | | | | | cM Map | 5 | 56.1 | NCBI | | | | |
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Cit (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955455 | 11,704,964 - 11,872,419 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955455 | 11,705,015 - 11,871,762 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CIT (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 10 | 127,751,423 - 127,942,873 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 127,747,802 - 127,939,251 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 117,264,627 - 117,456,069 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 120,641,747 - 120,832,511 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 120,641,747 - 120,832,511 (-) | Ensembl | panpan1.1 | | panPan2 | |
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CIT (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 26 | 15,721,500 - 15,885,133 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 26 | 15,723,690 - 15,884,343 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 26 | 15,726,097 - 15,891,228 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 26 | 15,988,829 - 16,154,093 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 26 | 15,989,170 - 16,153,050 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 26 | 15,958,883 - 16,123,644 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 26 | 16,027,058 - 16,192,182 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 26 | 16,068,008 - 16,233,213 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Cit (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405118 | 146,492,141 - 146,649,860 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936668 | 991,036 - 1,146,294 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936668 | 991,043 - 1,146,578 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CIT (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 14 | 33,009,877 - 33,196,286 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 33,009,828 - 33,195,985 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 34,987,299 - 35,141,860 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CIT (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 11 | 115,026,809 - 115,220,558 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 115,025,045 - 115,219,356 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 129,885,578 - 130,080,578 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cit (Heterocephalus glaber - naked mole-rat) |
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