Scl21 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Scl21 (Serum cholesterol level QTL 21) Rattus norvegicus

Symbol: Scl21
Name: Serum cholesterol level QTL 21
RGD ID: 1302792
Trait: blood cholesterol amount   (VT:0000180)    
Measurement Type: plasma total cholesterol level   (CMO:0000585)    
LOD Score: 3.8
P Value: 0.0011
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2127,196,730 - 46,669,029RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0128,954,593 - 27,911,196RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01210,898,188 - 54,450,796RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4127,754,826 - 25,802,539RGDRGSC3.4
RGSC_v3.1127,784,630 - 25,665,800RGD
Cross Type: Not Available
Strains Crossed: LEW HTG 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
HTG  (IEA)
LEW  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Rat model of familial combined hyperlipidemia as a result of comparative mapping. Ueno T, etal., Physiol Genomics 2004 Mar 12;17(1):38-47. Epub 2004 Jan 6.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2621Flt1Fms related receptor tyrosine kinase 11272968997468626Rat
7630468LOC102547586uncharacterized LOC1025475861273648167366809Rat
41146634LOC120095883uncharacterized LOC1200958831273750657392844Rat
1590880Pan3poly(A) specific ribonuclease subunit PAN31274767077595384Rat
1584949Rpl18a-ps2ribosomal protein L18A, pseudogene 21276150657616561Rat
61308Flt3Fms related receptor tyrosine kinase 31276239307699474Rat
1595191Uradureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase1277092787718925Rat
621234Cdx2caudal type homeo box 21277267987733142Rat
62387Pdx1pancreatic and duodenal homeobox 11277578657763064Rat
41344340LOC120096117small nucleolar RNA SNORA171278726267872754Rat
1310020Gsx1GS homeobox 11278806637882947Rat
41319381LOC120095852uncharacterized LOC1200958521278837557884688Rat
1564358Polr1dRNA polymerase I and III subunit D1279705928004157Rat
1308222Lnx2ligand of numb-protein X 21280052028070494Rat
40941861LOC120095885uncharacterized LOC1200958851281099548112013Rat
41360313LOC120095884uncharacterized LOC1200958841281100828112776Rat
1592673Mtif3mitochondrial translational initiation factor 31281261938140706Rat
619746Gtf3ageneral transcription factor III A1281367468144690Rat
11371602LOC108352419uncharacterized LOC1083524191282166898229202Rat
1303231Rasl11aRAS-like family 11 member A1282581488260909Rat
68390Rpl21ribosomal protein L211282686418272278Rat
40978574Snora27small nucleolar RNA, H/ACA box 271282699058270033Rat
41011142Snord102small nucleolar RNA, C/D box 1021282702758270345Rat
41141036Lmbr1l-ps1limb development membrane protein 1-like, pseudogene 11283054028306445Rat
1308045Usp12ubiquitin specific peptidase 121283098458363686Rat
41208279LOC120095887uncharacterized LOC1200958871284381968439433Rat
68333Gpr12G protein-coupled receptor 121285227098525875Rat
41279517LOC120095888uncharacterized LOC1200958881285436408546160Rat
41348606LOC120095929uncharacterized LOC1200959291285469118553407Rat
1592807Wasf3WASP family member 31285638058660799Rat
41169375LOC12009588960S ribosomal protein L29-like1286316048632206Rat
1590340Hint1l2histidine triad nucleotide binding protein 1 like 21286684388668940Rat
41384695LOC120095890uncharacterized LOC1200958901286852558704812Rat
1560888Cdk8cyclin-dependent kinase 81287371988805026Rat
1306092Rnf6ring finger protein 61288167978826870Rat
41153330LOC120095930uncharacterized LOC1200959301288433128846055Rat
628709Cyp3a18cytochrome P450, family 3, subfamily a, polypeptide 181288805098930382Rat
1595705Cyp3a73cytochrome P450, family 3, subfamily a, polypeptide 731289555938995061Rat
1583820Hsp90aa1-ps8heat shock protein 90 alpha family class A member 1, pseudogene 81289949248997727Rat
9074083Cyp3a2l1cytochrome P450, family 3, subfamily a, polypeptide 2 like 11290152209042818Rat
1597309Cyp3a71-pscytochrome P450, family 3, subfamily a, polypeptide 71, pseudogene1291363189151198Rat
708379Cyp3a2cytochrome P450, family 3, subfamily a, polypeptide 21292079789230064Rat
628626Cyp3a23-3a1cytochrome P450, family 3, subfamily a, polypeptide 23-polypeptide 11292561599285020Rat
11430784LOC10835242160S ribosomal protein L29 pseudogene1292775009278307Rat
1596095Dppa4l1developmental pluripotency associated 4 like 11292861419287341Rat
1308619Zscan25zinc finger and SCAN domain containing 251293273479338206Rat
1309158Zfp655zinc finger protein 6551293499859375449Rat
1311175Zkscan5zinc finger with KRAB and SCAN domains 51293845619405763Rat
628654Zfp394zinc finger protein 3941294090479417228Rat
1596067Atp5mfATP synthase membrane subunit f1294216659428236Rat
620440Cpsf4cleavage and polyadenylation specific factor 41294297659445586Rat
1311473Ptcd1pentatricopeptide repeat domain 11294456569463434Rat
621103Bud31BUD31 homolog1294628389470387Rat
620442Pdap1PDGFA associated protein 11294706529480880Rat
2155Arpc1bactin related protein 2/3 complex, subunit 1B1294821769495772Rat
620834Arpc1aactin related protein 2/3 complex, subunit 1A1295024969525304Rat
41250024Trnap-agg80transfer RNA proline (anticodon AGG) 801295309469531026Rat
1596017Rps15al1ribosomal protein S15A-like 11295334659533899Rat
11440668LOC108352477U1 small nuclear ribonucleoprotein C pseudogene1295701889570666Rat
1594749Kpna7karyopherin subunit alpha 71295763789635247Rat
1594738Smurf1SMAD specific E3 ubiquitin protein ligase 11296350099726520Rat
1305446Trraptransformation/transcription domain-associated protein1297380069827708Rat
40977332LOC120096103small nucleolar RNA SNORA701298221599822288Rat
1563248Tmem130transmembrane protein 1301298370559862843Rat
41248887Trnas-aga12transfer RNA serine (anticodon AGA) 121299859469986026Rat
1309447Nptx2neuronal pentraxin 2121003743510048345Rat
9241109LOC103693619uncharacterized LOC103693619121015764810158685Rat
2322550Cpsf4l2cleavage and polyadenylation specific factor 4 like 2121021174410213512Rat
1565131Rpl15l1ribosomal protein L15 like 1121022718110227989Rat
40932154LOC120096089U4 spliceosomal RNA121023732610237440Rat
1308452Baiap2l1BAR/IMD domain containing adaptor protein 2 like 1121025043410339937Rat
9081796Ube2n-ps5ubiquitin-conjugating enzyme E2N, pseudogene 5121030909510314132Rat
1309187Bri3brain protein I3121034100710364655Rat
7638517LOC102554669uncharacterized LOC102554669121034904510359627Rat
1306873Tecpr1tectonin beta-propeller repeat containing 1121039158710420462Rat
3091Bhlha15basic helix-loop-helix family, member a15121042046510424641Rat
1598332Lmtk2lemur tyrosine kinase 2121042677210508750Rat
3222Ocmoncomodulin121053561910596705Rat
1306410Ccz1CCZ1 homolog, vacuolar protein trafficking and biogenesis associated121060106610624608Rat
1311893Rsph10bradial spoke head 10 homolog B121062743410675227Rat
1305483Pms2PMS1 homolog 2, mismatch repair system component121067681810701161Rat
40982078LOC120096114small nucleolar RNA SNORA51121068966410689796Rat
1560787Aimp2aminoacyl tRNA synthetase complex-interacting multifunctional protein 2121070119410710772Rat
70883Eif2ak1eukaryotic translation initiation factor 2 alpha kinase 1121071077110744597Rat
1586393Ankrd61ankyrin repeat domain 61121071890810723267Rat
1585013Aldoa-ps3aldolase, fructose-bisphosphate A, pseudogene 3121077795210779290Rat
1305231Usp42ubiquitin specific peptidase 42121080086410840785Rat
41127121LOC120095931collagen alpha-1(I) chain-like121080481010821511Rat
620399Cyth3cytohesin 3121084013710933792Rat
1561923Fam220afamily with sequence similarity 220, member A121099796911013962Rat
619755Rac1Rac family small GTPase 1121103702811057251Rat
1310193Daglbdiacylglycerol lipase, beta121105973211102170Rat
1304618Kdelr2KDEL endoplasmic reticulum protein retention receptor 2121113882011157117Rat
1310492Grid2ipGrid2 interacting protein121116656711203765Rat
1308389Zdhhc4zinc finger DHHC-type palmitoyltransferase 4121123086411244898Rat
1584479Ints15integrator complex subunit 15121124504511260170Rat
11371857LOC108352423uncharacterized LOC108352423121125474711258556Rat
1563095Zfp853zinc finger protein 853121126612411276492Rat
1311647Zfp316zinc finger protein 316121129444511313841Rat
1564396Zfp12zinc finger protein 12121131697111330498Rat
1561076Spdye4speedy/RINGO cell cycle regulator family member E4121133726211344753Rat
7634033Spdye4-ps1speedy/RINGO cell cycle regulator family member E4, pseudogene 1121135951011373943Rat
1562875RbakRB-associated KRAB zinc finger121137531411388937Rat
7637009LOC102555525uncharacterized LOC102555525121139674711397774Rat
2322117Rpl36l5ribosomal protein L36 like 5121140837911408767Rat
1565135Rnf216ring finger protein 216121145475211576305Rat
41204650LOC120095834uncharacterized LOC120095834121150554911508629Rat
1583309Fscn1fascin actin-bundling protein 1121159704211610183Rat
41297723LOC120095835uncharacterized LOC120095835121160012611602621Rat
41050335LOC120095836uncharacterized LOC120095836121163259611640692Rat
628837Actbactin, beta121166311211666697Rat
1596958Fbxl18F-box and leucine-rich repeat protein 18121167453811701317Rat
11503703LOC108352424uncharacterized LOC108352424121174731011755112Rat
1307540Tnrc18trinucleotide repeat containing 18121175539411851717Rat
41235499LOC120095837uncharacterized LOC120095837121179749311801221Rat
1310545Slc29a4solute carrier family 29 member 4121185354011884660Rat
1359154Wipi2WD repeat domain, phosphoinositide interacting 2121191136911939799Rat
1306506Mmd2monocyte to macrophage differentiation-associated 2121196273312009776Rat
1306155RadilRap associating with DIL domain121202439512088540Rat
1310946Papolbpoly(A) polymerase beta121204427512046621Rat
1593125Ap5z1adaptor related protein complex 5 subunit zeta 1121209383412109043Rat
1309643Foxk1forkhead box K1121211011912175089Rat
41253801LOC120095892uncharacterized LOC120095892121219044212208375Rat
1560686Sdk1sidekick cell adhesion molecule 1121237807413363934Rat
1564193Ube2c-ps2ubiquitin-conjugating enzyme E2C, pseudogene 2121266888412669423Rat
41240022LOC120096102U6 spliceosomal RNA121303886713038969Rat
1584808Nip7-ps9nucleolar pre-rRNA processing protein NIP7, pseudogene 9121342089613421417Rat
41079527LOC120095893uncharacterized LOC120095893121343303013460245Rat
7598302LOC102547234uncharacterized LOC102547234121354778913607490Rat
2323211Card11caspase recruitment domain family, member 11121362114013758115Rat
71018Gna12G protein subunit alpha 12121380558013886255Rat
1311314Amz1archaelysin family metallopeptidase 1121388651813924275Rat
1565146Brat1BRCA1-associated ATM activator 1121392888913951760Rat
1311349IqceIQ motif containing E121394329013982708Rat
1309549Ttyh3tweety family member 3121399683114025457Rat
620587LfngLFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase121403055114038996Rat
71055Grifingalectin-related inter-fiber protein121408017014082892Rat
1308214Chst12carbohydrate sulfotransferase 12121411063114129099Rat
1598146Kif19bkinesin family member 19B121414416314196259Rat
41188349LOC120095895uncharacterized LOC120095895121414908814152690Rat
41182922LOC120096093U6 spliceosomal RNA121416998914170094Rat
1309018Eif3beukaryotic translation initiation factor 3, subunit B121419640314220865Rat
11502171LOC108352425uncharacterized LOC108352425121422308014265458Rat
1305791Snx8sorting nexin 8121425182914300435Rat
621080Nudt1nudix hydrolase 1121430251414309559Rat
1305944Mrm2mitochondrial rRNA methyltransferase 2121430955614314759Rat
1596881Mad1l1mitotic arrest deficient 1 like 1121432089214630750Rat
1308787Elfn1extracellular leucine-rich repeat and fibronectin type III domain containing 1121466004914725709Rat
2319950Psmg3proteasome assembly chaperone 3121480944014812357Rat
1306702Tmem184atransmembrane protein 184A121481750814833109Rat
628633MafkMAF bZIP transcription factor K121483462814856414Rat
7519900LOC102546414uncharacterized LOC102546414121484552214848118Rat
1308908Ints1integrator complex subunit 1121486131214886048Rat
1307875Micall2MICAL-like 2121489918814927949Rat
69361UncxUNC homeobox121509277915097300Rat
11414185Npm1-ps12nucleophosmin 1, pseudogene 12121513561915136849Rat
1310991Zfand2azinc finger AN1-type containing 2A121516160115172679Rat
1566418C12h7orf50similar to human chromosome 7 open reading frame 50121518572815289042Rat
619845Gper1G protein-coupled estrogen receptor 1121521721715222679Rat
7673409C130050O18RiklRIKEN cDNA C130050O18 gene like121522974315241457Rat
1560731Gpr146G protein-coupled receptor 146121525193615267217Rat
2325466Mir339microRNA 339121527754615277641Rat
1305193Cyp2w1cytochrome P450, family 2, subfamily w, polypeptide 1121529155215296421Rat
1305631Cox19cytochrome c oxidase assembly factor COX19121530353515313014Rat
621418Adap1ArfGAP with dual PH domains 1121532391315376110Rat
1311660Get4guided entry of tail-anchored proteins factor 4121537700915394238Rat
1359142Sun1Sad1 and UNC84 domain containing 1121539637815441277Rat
7682710LOC102547493uncharacterized LOC102547493121543065715453779Rat
1566028Dnaaf5dynein, axonemal, assembly factor 5121545363615492722Rat
3392Prkar1bprotein kinase cAMP-dependent type I regulatory subunit beta121549223315624942Rat
9133748LOC103691050uncharacterized LOC103691050121563246015636507Rat
3282Pdgfaplatelet derived growth factor subunit A121564554915667056Rat
7536442LOC10254879440S ribosomal protein S27-like121577683915778793Rat
1594158Foxl3forkhead box L3121581217715814534Rat
1311980Fam20cFAM20C, golgi associated secretory pathway kinase121582686415885423Rat
41016460Ppp1r14b-ps2protein phosphatase 1, regulatory (inhibitor) subunit 14B, pseudogene121589313815975566Rat
1566386Znf846zinc finger protein 846121597931216012933Rat
1310463Zfp68zinc finger protein 68121602605816040995Rat
1562569Rps8-ps9ribosomal protein S8, pseudogene 9121604777616048497Rat
1625997Vom2r-ps98vomeronasal 2 receptor, pseudogene 98121606460616066575Rat
6499499Spn-ps1sialophorin, pseudogene 1121610035416101498Rat
1598204Spn-ps7sialophorin, pseudogene 7121610570516106765Rat
6499303Spn-ps2sialophorin, pseudogene 2121611083816112028Rat
2319349Spn-ps6sialophorin, pseudogene 6121611083816117345Rat
1559964Spnl2sialophorin like 2121612615016131108Rat
1598202Spn-ps8sialophorin, pseudogene 8121613127516133558Rat
1359506Spnl1sialophorin like 1121613658316147719Rat
41150475Spn-ps5sialophorin, pseudogene 5121614788516150072Rat
6497070Spn-ps3sialophorin, pseudogene 3121615474016156686Rat
1359435Zfp157zinc finger protein 157121624823016279459Rat
1332710Or7a43-ps1olfactory receptor family 7 subfamily A member 43, pseudogene 1121628844616289236Rat
1305017Dhrsxdehydrogenase/reductase X-linked121629976816304553Rat
708472Asmtacetylserotonin O-methyltransferase121630471916309568Rat
1564640Akap17aA-kinase anchoring protein 17A121631042716315166Rat
1306877Asmtlacetylserotonin O-methyltransferase-like121631533516318083Rat
628728Il3rainterleukin 3 receptor subunit alpha121631808116323781Rat
1560288Pum3-ps3pumilio RNA-binding family member 3, pseudogene 3121635713116359221Rat
1595919Cyp3a62cytochrome P450, family 3, subfamily a, polypeptide 62121639799816433833Rat
41378758Fus-ps5FUS RNA binding protein, pseudogene 5121657167116577185Rat
1593752Tubb4b-ps2tubulin, beta 4B class IVb, pseudogene 2121661134416612890Rat
1562172Spry3sprouty RTK signaling antagonist 3121666318816673124Rat
621558Vamp7vesicle-associated membrane protein 7121672848616764261Rat
708392Cyp3a9cytochrome P450, family 3, subfamily a, polypeptide 9121680622216846428Rat
1595709LOC498158hypothetical LOC498158121686689516867939Rat
2319106Rpl31l15ribosomal protein L31 like 15121689311116893551Rat
727930Gjc3gap junction protein, gamma 3121689984616912309Rat
7581366Ccdc90b-ps1coiled-coil domain containing 90B, pseudogene 1121690674816908225Rat
2187Azgp1alpha-2-glycoprotein 1, zinc-binding121693099016939333Rat
41111819Rpl34-ps3ribosomal protein L34, pseudogene 3121696413416964559Rat
1560616Zkscan1zinc finger with KRAB and SCAN domains 1121696628716987680Rat
9368177Elocl1elongin C like 1121698971716991140Rat
1309981Zscan21zinc finger and SCAN domain containing 21121699849617024167Rat
9205257LOC103691091NHP2-like protein 1 pseudogene121701804017019347Rat
6489147Zfp113zinc finger protein 3121702210417033776Rat
1309919Cops6COP9 signalosome subunit 6121703897917041818Rat
1303018Mcm7minichromosome maintenance complex component 7121704220717049470Rat
2325594Mir25microRNA 25121704293217043015Rat
2325459Mir93microRNA 93121704313517043221Rat
2325388Mir106bmicroRNA 106b121704334417043425Rat
1310233Ap4m1adaptor related protein complex 4 subunit mu 1121704976617055954Rat
1311608Taf6TATA-box binding protein associated factor 6121705586417064244Rat
1307636Cnpy4canopy FGF signaling regulator 4121706464217070755Rat
1306932Mblac1metallo-beta-lactamase domain containing 1121707146517072736Rat
1588255Nxpe5neurexophilin and PC-esterase domain family, member 5121709762417119700Rat
1587058Nxpe5l2neurexophilin and PC-esterase domain family, member 5 like 2121712410417142519Rat
1587046Ptmal2prothymosin alpha like 2121715294917153791Rat
7675853LOC102551138uncharacterized LOC102551138121717846417200736Rat
1559954Nxpe5l1neurexophilin and PC-esterase domain family, member 5-like 1121718656617196784Rat
41070362LOC120095896NXPE family member 3-like121720844017225545Rat
1562319Nxpe5l3neurexophilin and PC-esterase domain family, member 5 like 3121723831117252723Rat
1309735Lamtor4late endosomal/lysosomal adaptor, MAPK and MTOR activator 4121725865617262478Rat
1305455Trappc14trafficking protein particle complex subunit 14121726274817267093Rat
1561105Gal3st4galactose-3-O-sulfotransferase 4121726796317276951Rat
621363Gpc2glypican 2121727787517284297Rat
621333Stag3STAG3 cohesin complex component121728467717314936Rat
1585866PvrigPVR related immunoglobulin domain containing121736372117365577Rat
1559588Pilrb2l4paired immunoglobin like type 2 receptor beta 2 like 4121739884417404810Rat
1562930Vom2r61vomeronasal 2 receptor, 61121743891117465634Rat
1598200Vom2r62vomeronasal 2 receptor, 62121752466217542226Rat
11466946Vmn2r116l-ps4vomeronasal 2, receptor 116 like, pseudogene 4121758263517615711Rat
1564022Vom2r63vomeronasal 2 receptor, 63121762514117652806Rat
1562525Pilrb2l5paired immunoglobin like type 2 receptor beta 2 like 5121767486017682715Rat
1566006Pilrb2l1paired immunoglobin like type 2 receptor beta 2 like 1121772021317732681Rat
41122052Rap1b-ps1RAP1B, member of RAS oncogene family, pseudogene 1121773295517734674Rat
40977068Pilrb2l8paired immunoglobin like type 2 receptor beta 2 like 8121774431517756074Rat
41102335Rap1b-ps2RAP1B, member of RAS oncogene family, pseudogene 2121775685017757928Rat
1561143Pilrb2paired immunoglobin like type 2 receptor beta 2121777304717779527Rat
6497409Pilrapaired immunoglobin-like type 2 receptor alpha121778716917798149Rat
6497217Zcwpw1l1zinc finger CW-type and PWWP domain containing 1-like 1121779865017812208Rat
7553419Pilrb1l3paired immunoglobin-like type 2 receptor beta 1 like 3121782366217828030Rat
1598199Vom2r-ps104vomeronasal 2 receptor, pseudogene 104121786250917880232Rat
41389804Vmn2r116l-ps7vomeronasal 2, receptor 116 like, pseudogene 7121790355317929309Rat
41145634Vmn2r116l-ps10vomeronasal 2, receptor 116 like, pseudogene 10121794226217956785Rat
1641975Vom2r-ps107vomeronasal 2 receptor, pseudogene 107121801328818014187Rat
41105168Vmn2r116l-ps11vomeronasal 2, receptor 116 like, pseudogene 11121803529818043422Rat
1583509Pilrb1l1paired immunoglobin-like type 2 receptor beta 1 like 1121808141018089619Rat
1561730Pilrb2l3paired immunoglobin like type 2 receptor beta 2 like 3121821053518216471Rat
41017732Trnag-acc1transfer RNA glycine (anticodon ACC) 1121822243818222512Rat
41111820Pilrb1l4paired immunoglobin-like type 2 receptor beta 1 like 4121822248018237114Rat
1559499Pilrb-ps7paired immunoglobin-like type 2 receptor beta, pseudogene 7121825144218257788Rat
1626043Vom2r-ps103vomeronasal 2 receptor, pseudogene 103121829031018300323Rat
41201467Vmn2r116l-ps8vomeronasal 2, receptor 116 like, pseudogene 8121831329718350370Rat
1626049Vom2r-ps101vomeronasal 2 receptor, pseudogene 101121837651218387463Rat
1584665Vom2r64vomeronasal 2 receptor, 64121841940918449218Rat
1625996Vom2r-ps100vomeronasal 2 receptor, pseudogene 100121846688518480996Rat
1584675Pilrb1paired immunoglobin-like type 2 receptor beta 1121851616118525375Rat
1563400Pilrb2l2paired immunoglobin like type 2 receptor beta 2 like 2121856684118580286Rat
6496729Pilrb-ps1paired immunoglobin-like type 2 receptor beta, pseudogene 1121860115618607655Rat
1560262Pilrb-ps6paired immunoglobin-like type 2 receptor beta, pseudogene 6121860905518630916Rat
41169192LOC120095853uncharacterized LOC120095853121865363018661701Rat
40963637Pilrb-ps4paired immunoglobin-like type 2 receptor beta, pseudogene 4121870450918710373Rat
41202788LOC120095904uncharacterized LOC120095904121872580418728687Rat
11492645Pilrb-ps2paired immunoglobin-like type 2 receptor beta, pseudogene 2121877185018777708Rat
1597726Pilrbl1paired immunoglobin-like type 2 receptor beta like 1121879284018799391Rat
40942766Pilrb-ps3paired immunoglobin-like type 2 receptor beta, pseudogene 3121880167318811757Rat
7556717Pilrb1l2paired immunoglobin-like type 2 receptor beta 1 like 2121881408518837515Rat
9261510LOC103693637ras-related protein Rap-1b pseudogene121882114618821924Rat
41314880Rap1b-ps3RAP1B, member of RAS oncogene family, pseudogene 3121883809818839898Rat
41173580Pilrb2l7paired immunoglobin like type 2 receptor beta 2 like 7121885345218861001Rat
6498401LOC100910497paired immunoglobulin-like type 2 receptor alpha-like121886630118881290Rat
1305405Zcwpw1zinc finger CW-type and PWWP domain containing 1121888062518910713Rat
1560550Mepcemethylphosphate capping enzyme121891179618916515Rat
1584367Ppp1r35protein phosphatase 1, regulatory subunit 35121891590918919253Rat
11442159Spacdrsperm acrosome developmental regulator121893060818936787Rat
1584380Tsc22d4TSC22 domain family, member 4121893915018952008Rat
1310964Nyap1neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1121895619218967624Rat
1591278Echdc2-ps1enoyl CoA hydratase domain containing 2, pseudogene 1121898935318992172Rat
1306590Agfg2ArfGAP with FG repeats 2121901222819048433Rat
69317Irs3insulin receptor substrate 3121905314819055286Rat
1562406Sap25Sin3A-associated protein 25121905576219057425Rat
1306145Lrch4leucine rich repeats and calponin homology domain containing 4121905758219072573Rat
1305095Fbxo24F-box protein 24121907266819083067Rat
3270Pcolceprocollagen C-endopeptidase enhancer121908419119090508Rat
1304973Mospd3motile sperm domain containing 3121909520319100303Rat
1310152Tfr2transferrin receptor 2121910767319124622Rat
1307763Actl6bactin-like 6B121912488719141419Rat
69319Gnb2G protein subunit beta 2121915900219164021Rat
1309933Gigyf1GRB10 interacting GYF protein 1121916607019181570Rat
1306413Pop7POP7 homolog, ribonuclease P/MRP subunit121918938419190425Rat
2559Epoerythropoietin121920425819207948Rat
1305044Zanzonadhesin121921501819322789Rat
1583193Ephb4EPH receptor B4121932641119351667Rat
9263674LOC103691283uncharacterized LOC103691283121936730619368987Rat
620747Slc12a9solute carrier family 12, member 9121936899019385881Rat
1583180Trip6thyroid hormone receptor interactor 6121938621219390619Rat
1591241Srrtserrate, RNA effector molecule121939257819406098Rat
7536909Ufsp1UFM1-specific peptidase 1121940613319407147Rat
69313Acheacetylcholinesterase121940613319413713Rat
41199718LOC120095907uncharacterized LOC120095907121941722819420134Rat
40994669LOC120095953mucin-3A-like121943221419442687Rat
6485223Muc3amucin 3A, cell surface associated121945067919454753Rat
41045133Muc3l1mucin 3 like 1121945578319462165Rat
40984024LOC120095955mucin-12-like121948604119493995Rat
3124Muc17mucin 17, cell surface associated121952725119536924Rat
40958426Trim56tripartite motif containing 56121954491319567324Rat
41120780LOC120095911uncharacterized LOC120095911121954803519556511Rat
3249Serpine1serpin family E member 1121960127219611657Rat
1305911Ap1s1adaptor related protein complex 1 subunit sigma 1121962526719635792Rat
69399VgfVGF nerve growth factor inducible121963731319645123Rat
1592588Mogat3monoacylglycerol O-acyltransferase 3121966870319669420Rat
631339Plod3procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3121967638419686945Rat
4888576Mir702microRNA 702121968180919681915Rat
2322870Znhit1zinc finger, HIT-type containing 1121968660619692880Rat
1310678Cldn15claudin 15121969816719708419Rat
1306668Fis1fission, mitochondrial 1121970856019723392Rat
6496734LOC100910802uncharacterized LOC100910802121974235519757486Rat
1305370Ift22intraflagellar transport 22121975907219768859Rat
1591401Col26a1collagen type XXVI alpha 1 chain121979269319938556Rat
1561258Myl10myosin light chain 10121996917419982627Rat
41397405LOC120095912uncharacterized LOC120095912122004641720053457Rat
620618Cux1cut-like homeobox 1122010706220425868Rat
69284Sh2b2SH2B adaptor protein 2122042705720456845Rat
1595708Prkrip1PRKR interacting protein 1122047080220491789Rat
1310213Orai2ORAI calcium release-activated calcium modulator 2122050030820520428Rat
1308608Alkbh4alkB homolog 4, lysine demethylase122052403020529947Rat
1359442Lrwd1leucine-rich repeats and WD repeat domain containing 1122053003520543078Rat
1310198Polr2jRNA polymerase II subunit J122054303820548590Rat
1565457Rasa4RAS p21 protein activator 4122055280520580177Rat
1598237Upk3bl1uroplakin 3B like 1122061035320616366Rat
41214653LOC120095913uncharacterized LOC120095913122062250520633507Rat
1309615Upk3buroplakin 3B122063023120637634Rat
1561790Dtx2deltex E3 ubiquitin ligase 2122064328920682908Rat
41148403LOC120096097U6 spliceosomal RNA122064436520644470Rat
620606Zp3zona pellucida glycoprotein 3122069054720697513Rat
1306970Ssc4dscavenger receptor cysteine rich family member with 4 domains122070293120723732Rat
40927760LOC120096095U6 spliceosomal RNA122072241820722523Rat
62002Ywhagtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma122074450020772828Rat
41184641Rps11-ps6ribosomal protein S11, pseudogene 6122078737120791987Rat
61306Hspb1heat shock protein family B (small) member 1122079401420795675Rat
1587868Srrm3serine/arginine repetitive matrix 3122080887820878557Rat
11499585LOC108352435uncharacterized LOC108352435122088043520891489Rat
619719Mdh2malate dehydrogenase 2122089426920907225Rat
1305845Styxl1serine/threonine/tyrosine interacting-like 1122090741020940232Rat
1311474Tmem120atransmembrane protein 120A122094224320950908Rat
68335Porcytochrome p450 oxidoreductase122095105820999198Rat
1308231Rhbdd2rhomboid domain containing 2122104360521054305Rat
1310245Ccl24C-C motif chemokine ligand 24122110083521104832Rat
1587817Ccl26C-C motif chemokine ligand 26122110938421114336Rat
1583828Rps13-ps4ribosomal protein S13, pseudogene 4122112530921125763Rat
620305Hip1huntingtin interacting protein 1122113336421267796Rat
41306277LOC120095918uncharacterized LOC120095918122115005021151606Rat
620680Pom121POM121 transmembrane nucleoporin122127371321294299Rat
41275322LOC120095917uncharacterized LOC120095917122127463921276764Rat
1309268Nsun5NOP2/Sun RNA methyltransferase 5122129363721299319Rat
631346Trim50tripartite motif-containing 50122130078421317668Rat
1308926Fkbp6FKBP prolyl isomerase family member 6122131825121390350Rat
41198486LOC120095916uncharacterized LOC120095916122139043821401115Rat
628817Fzd9frizzled class receptor 9122142708421429398Rat
1597089Baz1bbromodomain adjacent to zinc finger domain, 1B122143198521489956Rat
41064979LOC1200960805S ribosomal RNA122147615321476268Rat
1597090Bcl7bBAF chromatin remodeling complex subunit BCL7B122149686021510079Rat
1595038Tbl2transducin (beta)-like 2122151760021531896Rat
620400MlxiplMLX interacting protein-like122154160821577120Rat
1587769Vps37dVPS37D subunit of ESCRT-I122160921021614669Rat
1595783Dnajc30DnaJ heat shock protein family (Hsp40) member C30122162831921629398Rat
1589742Bud23BUD23, rRNA methyltransferase and ribosome maturation factor122162955121640758Rat
41383089LOC120096124small Cajal body-specific RNA 20122163961521639747Rat
69430Stx1asyntaxin 1A122164197121670022Rat
1585479Abhd11-as1ABHD11 antisense RNA 1 (tail to tail)122168111821682106Rat
1304681Abhd11abhydrolase domain containing 11122168220621685331Rat
68425Cldn3claudin 3122170853821710010Rat
41401627Rps13-ps6ribosomal protein S13, pseudogene 6122171220021715310Rat
1585449Arpc5l-ps3actin related protein 2/3 complex, subunit 5-like, pseudogene 3122173477521735623Rat
1307932Cldn4claudin 4122175163821753436Rat
1588881Mettl27methyltransferase like 27122175754521766698Rat
9242288LOC103691506claudin-4-like122177606621776722Rat
41255513LOC120095920uncharacterized LOC120095920122179357721800351Rat
1561903Tmem270transmembrane protein 270122179363121798723Rat
7520086LOC102553484uncharacterized LOC102553484122196238721969793Rat
67394Elnelastin122196854422011929Rat
62055Limk1LIM domain kinase 1122202669722060605Rat
11405154LOC10835248440S ribosomal protein S14 pseudogene122206842522069114Rat
1359222Eif4heukaryotic translation initiation factor 4H122208315522099876Rat
631397Lat2linker for activation of T cells family, member 2122210417322118294Rat
621198Rfc2replication factor C subunit 2122212044922133576Rat
7689818LOC102553558uncharacterized LOC102553558122213845522140424Rat
1583827Chmp5-ps3charged multivesicular body protein 5, pseudogene 3122214657622147671Rat
1563240Ervfrd-1endogenous retrovirus group FRD member 1, envelope122215121122158264Rat
62019Clip2CAP-GLY domain containing linker protein 2122216304422227023Rat
620856Gtf2ird1GTF2I repeat domain containing 1122225411322361052Rat
727961Gtf2igeneral transcription factor II I122240093322476243Rat
61307Ncf1neutrophil cytosolic factor 1122248538222494647Rat
1307435Gtf2ird2GTF2I repeat domain containing 2122249776722536455Rat
1307558Rcc1lRCC1 like122254312522574042Rat
1304672Castor2cytosolic arginine sensor for mTORC1 subunit 2122257750422620182Rat
7587101LOC102553721uncharacterized LOC102553721122262846522635776Rat
40965707LOC120096096U6 spliceosomal RNA122276037022760469Rat
6488308Rpsa-ps7ribosomal protein SA, pseudogene 7122279671522803092Rat
40951983LOC120095854uncharacterized LOC120095854122280502222815570Rat
41319237LOC120095855uncharacterized LOC120095855122285966222867915Rat
41001183LOC120095924uncharacterized LOC120095924122293268922945250Rat
40992997LOC120095926uncharacterized LOC120095926122322144823319564Rat
41373117LOC120095927uncharacterized LOC120095927122341717523434982Rat
11435442LOC108352438uncharacterized LOC108352438122366574023707081Rat
7489014Mir6322microRNA 6322122378000123780119Rat
41166140Rps29-ps4ribosomal protein S29, pseudogene 4122379983923800137Rat
41344750Pnp-ps1purine nucleoside phosphorylase, pseudogene 1122389459123895813Rat
2323959Auts2activator of transcription and developmental regulator AUTS2122410418725194123Rat
40964822LOC120095842uncharacterized LOC120095842122496547324968048Rat
1563452Galnt17polypeptide N-acetylgalactosaminyltransferase 17122532323025781897Rat
7684404LOC102550645uncharacterized LOC102550645122580013725805997Rat
1305843Caln1calneuron 1122581174326303670Rat
41391291Trnas-aga21transfer RNA serine (anticodon AGA) 21122614549226145564Rat
1310420Tyw1tRNA-yW synthesizing protein 1 homolog122633202026418286Rat
41132218Ifitm1-ps2interferon induced transmembrane protein 1, pseudogene 2122639569326395896Rat
1311043SbdsSbds, ribosome maturation factor122642041026429650Rat
1303319Tmem248transmembrane protein 248122643077526457105Rat
41387608Trnal-aag19transfer RNA leucine (anticodon AAG) 19122645849526458569Rat
1307295Rabgef1RAB guanine nucleotide exchange factor 1122645919026503790Rat
1582914Kctd7potassium channel tetramerization domain containing 7122652096926532327Rat
1308473Tpst1tyrosylprotein sulfotransferase 1122654453626605706Rat
620753CrcpCGRP receptor component122662396826659756Rat
619974Aslargininosuccinate lyase122665966426677136Rat
41266323LOC120096116small nucleolar RNA SNORA17122668094826681081Rat
41387478Trnat-agu12transfer RNA threonine (anticodon AGU) 12122668978826689862Rat
1598198Rps9-ps15ribosomal protein S9, pseudogene 15122669235326698674Rat
41014265LOC120096125small nucleolar RNA SNORA81122669321226693392Rat
41161287LOC120096127small nucleolar RNA SNORA81122669615026696237Rat
2772Gusbglucuronidase, beta122670118826714718Rat
1303249Vkorc1l1vitamin K epoxide reductase complex, subunit 1-like 1122671795926768193Rat
41114360Trnaa-agc84transfer RNA alanine (anticodon AGC) 84122676349126763563Rat
1560258Nupr2nuclear protein 2, transcriptional regulator122680012326803228Rat
1559988Zbed5zinc finger BED-type containing 5122680765226813706Rat
7646482LOC102555557MLV-related proviral Env polyprotein-like122682069126822694Rat
6496638Chchd2coiled-coil-helix-coiled-coil-helix domain containing 2122682873826834762Rat
3325Phkg1phosphorylase kinase catalytic subunit gamma 1122683882226854547Rat
1563253Sumf2sulfatase modifying factor 2122685356126871835Rat
40968761LOC120095933uncharacterized LOC120095933122686188326865773Rat
1304763Cct6achaperonin containing TCP1 subunit 6A122687273626883125Rat
41308945LOC120096108small nucleolar RNA SNORA15122687576126875891Rat
41347348Snora22csmall nucleolar RNA, H/ACA box 22C122688078826880922Rat
1308764Psphphosphoserine phosphatase122688252426905084Rat
1566421Nipsnap2nipsnap homolog 2122690606826944201Rat
40971147LOC120096123small nucleolar RNA SNORA76122692392026924065Rat
1307650Mrps17mitochondrial ribosomal protein S17122694853526951828Rat
1596186Septin14septin 14122697528327005588Rat
11492414LOC10835244040S ribosomal protein S25 pseudogene122702189927022580Rat
2324824Zfp11zinc finger protein 11122702806727040846Rat
1311541Mmp17matrix metallopeptidase 17122707439827099317Rat
41053934LOC120095935uncharacterized LOC120095935122707716627079043Rat
1305004Sfswapsplicing factor SWAP122710960727179941Rat
7689144LOC102555340uncharacterized LOC102555340122731604127324144Rat
1594795Adgrd1adhesion G protein-coupled receptor D1122748890827603714Rat
40947512LOC120095936uncharacterized LOC120095936122761394627623220Rat
41096920LOC120095937uncharacterized LOC120095937122763709427645516Rat
620367RanRAN, member RAS oncogene family122767404927678598Rat
2558Stx2syntaxin 2122767874427714751Rat
708533Rimbp2RIMS binding protein 2122774761527946256Rat
1306980Piwil1piwi-like RNA-mediated gene silencing 1122794974327970645Rat
11518793LOC108352441uncharacterized LOC108352441122797074527974390Rat
1583825Fzd10frizzled class receptor 10122809837128101566Rat
11406627Rps20-ps3ribosomal protein S20, pseudogene 3122814558828146353Rat
41145714LOC120095942uncharacterized LOC120095942122824438928263727Rat
735062Tmem132dtransmembrane protein 132D122827003928917324Rat
40950631LOC120095943uncharacterized LOC120095943122830924128329042Rat
1304896Glt1d1glycosyltransferase 1 domain containing 1122897598429049707Rat
708469Slc15a4solute carrier family 15 member 4122904863429082480Rat
1583824Tmem132ctransmembrane protein 132C122911521329437900Rat
11472079LOC108352443uncharacterized LOC108352443122914059329146192Rat
41181629Tmem254-ps1transmembrane protein 254, pseudogene 1122939753429414987Rat
41348602LOC120095946uncharacterized LOC120095946122946757229469165Rat
41154964LOC120096083U2 spliceosomal RNA122946950029469687Rat
1559821Myl6l2myosin light chain 6 like 2122948809129488746Rat
41083776LOC120095947uncharacterized LOC120095947122950898329528608Rat
9386528Rpl7-ps7ribosomal protein L7, pseudogene 7122955463029556108Rat
9188281LOC103691337uncharacterized LOC103691337122964621429652464Rat
41351787LOC120095949uncharacterized LOC120095949122973060929736279Rat
41235196LOC120095951uncharacterized LOC120095951122986393629869460Rat
41366922LOC120095952uncharacterized LOC120095952122988752429899402Rat
11363226LOC108352445uncharacterized LOC108352445122995068830009315Rat
2324513Mrpl23-ps1mitochondrial ribosomal protein L23, pseudogene 1123012462230125050Rat
7668786LOC102549552uncharacterized LOC102549552123014630830148665Rat
41213846LOC120095956uncharacterized LOC120095956123014922730154629Rat
11405284LOC108352488uncharacterized LOC108352488123018629430194578Rat
1592278Frg1-ps1FSHD region gene 1, pseudogene 1123026902130269933Rat
11493793LOC108352502uncharacterized LOC108352502123038801030409963Rat
40974416LOC120095960uncharacterized LOC120095960123068444330713892Rat
1566191Tmem132btransmembrane protein 132B123082983131093841Rat
41202940LOC120095961uncharacterized LOC120095961123099435430996878Rat
708522Aacsacetoacetyl-CoA synthetase123111309831156411Rat
1561711Bri3bpBri3 binding protein123117674231188563Rat
1306837Dhx37DEAH-box helicase 37123119478231214890Rat
11517466Trnaa-ugc3transfer RNA alanine (anticodon UGC) 3123122046331220534Rat
11440418Trnad-guc4transfer RNA aspartic acid (anticodon GUC) 4123122106331221134Rat
11367381Trnaf-gaa4transfer RNA phenylalanine (anticodon GAA) 4123122392631223998Rat
11425977Trnad-guc5transfer RNA aspartic acid (anticodon GUC) 5123122438131224452Rat
11373727Trnaa-ugc4transfer RNA alanine (anticodon UGC) 4123122569831225769Rat
621244Ubcubiquitin C123123914931243924Rat
2302Scarb1scavenger receptor class B, member 1123129614331362649Rat
41213561LOC120095963uncharacterized LOC120095963123136729531370732Rat
1310293Ncor2nuclear receptor co-repressor 2123146641831628319Rat
41017092LOC120095965uncharacterized LOC120095965123152405131528132Rat
1588777Rflnarefilin A123163336031642313Rat
7677226Zfp664zinc finger protein 664123176779231796038Rat
1561886Rpl27l5ribosomal protein L27 like 5123177986031780438Rat
1601131Ccdc92coiled-coil domain containing 92123179610231823333Rat
619988Dnah10dynein, axonemal, heavy chain 10123182345131946857Rat
9133337LOC103691347eukaryotic translation initiation factor 1 pseudogene123191454131914883Rat
41097782LOC120095966uncharacterized LOC120095966123194682131962475Rat
621006Atp6v0a2ATPase H+ transporting V0 subunit a2123194722031979875Rat
1591895Tctn2tectonic family member 2123198244032007242Rat
41257986Trnaa-agc44transfer RNA alanine (anticodon AGC) 44123199897931999059Rat
40970512Timm23-ps1translocase of inner mitochondrial membrane 23, pseudogene 1123200749732008787Rat
1305494Gtf2h3general transcription factor IIH subunit 3123200901032025484Rat
620819Eif2b1eukaryotic translation initiation factor 2B subunit alpha123202559332033848Rat
2324094Ddx55DEAD-box helicase 55123203446232050218Rat
69243Tmed2transmembrane p24 trafficking protein 2123205254232061628Rat
1307973Rilpl1Rab interacting lysosomal protein-like 1123207187032109687Rat
1310724Snrnp35small nuclear ribonucleoprotein U11/U12 subunit 35123211203232119829Rat
1303140Rilpl2Rab interacting lysosomal protein-like 2123212590832137426Rat
1587560Kmt5alysine methyltransferase 5A123213935332167777Rat
1310005Sbno1strawberry notch homolog 1123217517632234200Rat
1308664Cdk2ap1cyclin-dependent kinase 2 associated protein 1123224975232258483Rat
1563482Mtrfrmitochondrial translation release factor in rescue123226156932275258Rat
1598368Mphosph9M-phase phosphoprotein 9123227544932346097Rat
1310867Pitpnm2phosphatidylinositol transfer protein, membrane-associated 2123234745532479103Rat
1307657Arl6ip4ADP-ribosylation factor like GTPase 6 interacting protein 4123247962332481768Rat
1310594Ogfod22-oxoglutarate and iron-dependent oxygenase domain containing 2123248238632485688Rat
41316137LOC120096094U6 spliceosomal RNA123249059432490697Rat
620254Abcb9ATP binding cassette subfamily B member 9123249921332531932Rat
7543130LOC102552690uncharacterized LOC102552690123253546632560005Rat
1304576Vps37bVPS37B subunit of ESCRT-I123256004732589015Rat
621615Hip1rhuntingtin interacting protein 1 related123259016432618841Rat
1586391Ccdc62coiled-coil domain containing 62123262317032659912Rat
1584200Denrdensity regulated reinitiation and release factor123266251232685283Rat
1586364Hcar1hydroxycarboxylic acid receptor 1123271068032713934Rat
727952Hcar2hydroxycarboxylic acid receptor 2123272625232728238Rat
1307905Kntc1kinetochore associated 1123276902032839617Rat
1564882Rsrc2arginine and serine rich coiled-coil 2123283984032859820Rat
1309774Zcchc8zinc finger CCHC-type containing 8123286917032892707Rat
2323644LOC100359550protein S100-A11-like123290539632905803Rat
67404Clip1CAP-GLY domain containing linker protein 1123291093233017891Rat
41062965LOC120095846uncharacterized LOC120095846123296019532960798Rat
620643Vps33aVPS33A core subunit of CORVET and HOPS complexes123302459633051399Rat
1310885Diablodiablo, IAP-binding mitochondrial protein123305578433070401Rat
1309612B3gnt4UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4123307022133073904Rat
1561461Lrrc43leucine rich repeat containing 43123307414933092257Rat
1585183Il31interleukin 31123309510833105026Rat
1560774MlxipMLX interacting protein123312852433192300Rat
40933635LOC120096088U4 spliceosomal RNA123318341633183497Rat
1585128Bcl7aBAF chromatin remodeling complex subunit BCL7A123321197833243903Rat
41176598LOC120095967uncharacterized LOC120095967123324397233272229Rat
1564948Cfap251cilia and flagella associated protein 251123326162233337028Rat
41115357LOC120095968uncharacterized LOC120095968123332778933331332Rat
621110Psmd9proteasome 26S subunit, non-ATPase 9123333718233357468Rat
7586771LOC102547495uncharacterized LOC102547495123337397433381533Rat
61974Hpd4-hydroxyphenylpyruvate dioxygenase123338139733392750Rat
2323325Setd1bSET domain containing 1B, histone lysine methyltransferase123339596333421671Rat
1584038Rhofras homolog family member F, filopodia associated123342237533446689Rat
1584031Tmem120btransmembrane protein 120B123344744133487257Rat
1583094Rpl32-ps9ribosomal protein L32, pseudogene 9123349625333497041Rat
1583091Morn3MORN repeat containing 3123350565433529918Rat
1311873Orai1ORAI calcium release-activated calcium modulator 1123353315133548361Rat
7710500LOC102546488uncharacterized LOC102546488123354839733557605Rat
7734862Lraplocus regulating alcohol preference123356248233574339Rat
1310217Kdm2blysine demethylase 2B123356653033701366Rat
628636Rnf34ring finger protein 34123370365533724606Rat
40965160LOC120095970uncharacterized LOC120095970123372632133734720Rat
1306125Anapc5anaphase-promoting complex subunit 5123374870933781709Rat
620092Camkk2calcium/calmodulin-dependent protein kinase kinase 2123379102333845000Rat
41129989LOC120096090U4 spliceosomal RNA123381990433820064Rat
41132992LOC120095972uncharacterized LOC120095972123382624933828687Rat
62073P2rx4purinergic receptor P2X 4123384460933862265Rat
1598196Rpl32-ps11ribosomal protein L32, pseudogene 11123387057333873601Rat
3241P2rx7purinergic receptor P2X 7123388970933934168Rat
727862Ift81intraflagellar transport 81123395774434037164Rat
2174Atp2a2ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2123407271034122142Rat
1311927Anapc7anaphase promoting complex subunit 7123413121434160819Rat
2324823Rpl38-ps4ribosomal protein L38, pseudogene 4123414722234147659Rat
1311985Arpc3actin related protein 2/3 complex, subunit 3123417278034186651Rat
11445374LOC108352447uncharacterized LOC108352447123417499234179566Rat
41013557LOC120096106small nucleolar RNA SNORA67123418204634182188Rat
1303034Gpn3GPN-loop GTPase 3123418928534198251Rat
1310861Fam216afamily with sequence similarity 216, member A123419852634207673Rat
1308332Vps29VPS29 retromer complex component123420891134217977Rat
1308223Rad9bRAD9 checkpoint clamp component B123421786834248380Rat
1310383Pptc7protein phosphatase targeting COQ7123424996334288339Rat
11517723LOC108352448uncharacterized LOC108352448123426385534267760Rat
1566266Tctn1tectonic family member 1123430979534347190Rat
1310788Hvcn1hydrogen voltage-gated channel 1123434167334370010Rat
3377Ppp1ccprotein phosphatase 1 catalytic subunit gamma123438307234400553Rat
41376041LOC120095977uncharacterized LOC120095977123440810134424345Rat
1562334Ccdc63coiled-coil domain containing 63123442438834453080Rat
41142854LOC1200960785S ribosomal RNA123444480334444920Rat
1564245Myl2myosin light chain 2123445422334468554Rat
41282935LOC120095979uncharacterized LOC120095979123450251234507096Rat
1305967Cux2cut-like homeobox 2123450772334707581Rat
41239638LOC120095978uncharacterized LOC120095978123461097434614202Rat
1310656Pheta1PH domain containing endocytic trafficking adaptor 1123471183134717601Rat
68411Sh2b3SH2B adaptor protein 3123473193434753617Rat
1306637Atxn2ataxin 2123475413234851175Rat
41120407Fbxo22-ps1F-box protein 22, pseudogene 1123479768734808256Rat
1586551BrapBRCA1 associated protein123487453334901030Rat
1310159Acad10acyl-CoA dehydrogenase family, member 10123490121134943973Rat
69219Aldh2aldehyde dehydrogenase 2 family member123494954934982527Rat
1564113Mapkapk5MAPK activated protein kinase 5123499352035013059Rat
621467Adam1aADAM metallopeptidase domain 1a123501743335020300Rat
1596066Tmem116transmembrane protein 116123502191235089409Rat
2322512Adam1ba disintegrin and metallopeptidase domain 1b123503716135040574Rat
619781Erp29endoplasmic reticulum protein 29123508969835095952Rat
41049657LOC120095847uncharacterized LOC120095847123508986335094145Rat
1305685Naa25N(alpha)-acetyltransferase 25, NatB auxiliary subunit123509825635150498Rat
2320799LOC10036456140S ribosomal protein S27-like123513904935139517Rat
6500917LOC10090991140S ribosomal protein S20-like123515593435156460Rat
620171Trafd1TRAF type zinc finger domain containing 1123516560635179525Rat
1309762Hectd4HECT domain E3 ubiquitin protein ligase 4123518216535330935Rat
619826Rpl6ribosomal protein L6123534749335352011Rat
41368808LOC120096111small nucleolar RNA SNORA42/SNORA80 family123535131235351445Rat
3447Ptpn11protein tyrosine phosphatase, non-receptor type 11123536543635424925Rat
620073Rph3arabphilin 3A123554238935618901Rat
1359379Oas1i2 ' -5 ' oligoadenylate synthetase 1I123562456635636608Rat
1310349Oas1d2'-5' oligoadenylate synthetase 1D123564858335658037Rat
621760Oas1a2'-5' oligoadenylate synthetase 1A123566979835680505Rat
1359732Oas1h2 ' -5 ' oligoadenylate synthetase 1H123568286235695717Rat
1359647Oas1f2 ' -5 ' oligoadenylate synthetase 1F123569702435706617Rat
708393Oas1b2-5 oligoadenylate synthetase 1B123572456135735271Rat
1359611Oas1e2'-5' oligoadenylate synthetase 1E123575035935759304Rat
1359279Oas1k2 ' -5 ' oligoadenylate synthetase 1K123576248335771710Rat
1359319Oas32'-5'-oligoadenylate synthetase 3123577902835802781Rat
1359697Oas22'-5' oligoadenylate synthetase 2123580282435830778Rat
1585380Dtx1deltex E3 ubiquitin ligase 1123584964735880835Rat
1311820Rasal1RAS protein activator like 1123588126935913727Rat
2325045Ndufa1-ps2NADH:ubiquinone oxidoreductase subunit A1, pseudogene 2123592133435921801Rat
1561303Cfap73cilia and flagella associated protein 73123592889235935664Rat
1562539Ddx54DEAD-box helicase 54123593471335949956Rat
1306772Rita1RBPJ interacting and tubulin associated 1123595009035953960Rat
1560757IqcdIQ motif containing D123595552235972420Rat
708494Tpcn1two pore segment channel 1123597281336029632Rat
41057520LOC120095848uncharacterized LOC120095848123597663135983611Rat
1565818Slc8b1solute carrier family 8 member B1123602975936053087Rat
708461Plbd2phospholipase B domain containing 2123606280236081984Rat
67376Sdsserine dehydratase123608322636090540Rat
1309192Sdslserine dehydratase-like123609969336109914Rat
71079Lhx5LIM homeobox 5123612618636134625Rat
41331926LOC120095980uncharacterized LOC120095980123614450336146878Rat
1308928Rbm19RNA binding motif protein 19123636577536451033Rat
41089695LOC1200960195S ribosomal RNA123648270236482820Rat
11380654LOC108352451uncharacterized LOC108352451123659268436623169Rat
41304617LOC120095982uncharacterized LOC120095982123665177436658765Rat
1305702Tbx5T-box transcription factor 5123668634436739253Rat
7627339LOC102549962uncharacterized LOC102549962123673937136740501Rat
735203Tbx3T-box transcription factor 3123687992436894849Rat
40970911LOC120095983uncharacterized LOC120095983123692843436930499Rat
11459514LOC108352453uncharacterized LOC108352453123696484036990681Rat
7530977LOC102551773uncharacterized LOC102551773123703967037045930Rat
41036577LOC120095984uncharacterized LOC120095984123708033137084675Rat
41231540LOC120095986uncharacterized LOC120095986123711584337118001Rat
41111709LOC120095985uncharacterized LOC120095985123713407337144790Rat
40969426LOC120095858uncharacterized LOC120095858123714484237151202Rat
41311154LOC120095859uncharacterized LOC120095859123716943637174115Rat
41074579LOC120095987uncharacterized LOC120095987123762211137627400Rat
11363582LOC108352455uncharacterized LOC108352455123774484237753270Rat
1305884Med13lmediator complex subunit 13L123780759638004886Rat
41026805LOC120095989uncharacterized LOC120095989123787102037874725Rat
7734279LOC102552816uncharacterized LOC102552816123802559438034500Rat
7526590LOC102552995uncharacterized LOC102552995123804442338050855Rat
7564907LOC102553129uncharacterized LOC102553129123814660038153400Rat
41302784LOC120096118small nucleolar RNA SNORA17123830499338305111Rat
1562310Spring1SREBF pathway regulator in golgi 1123830622738329175Rat
1560195Rnft2ring finger protein, transmembrane 2123832921738387303Rat
7744953LOC102553921uncharacterized LOC102553921123836155638373100Rat
70549Hrkharakiri, BCL2 interacting protein123838748438409652Rat
1306032Fbxw8F-box and WD repeat domain containing 8123842646638517076Rat
41011079LOC120096099U6 spliceosomal RNA123843249938432604Rat
1566317Tesctescalcin123852183238555665Rat
1307346Fbxo21F-box protein 21123857087838605133Rat
3184Nos1nitric oxide synthase 1123861511138795492Rat
41012245LOC120095990uncharacterized LOC120095990123862418138631305Rat
41254769LOC120095991uncharacterized LOC120095991123864272338650714Rat
1562674Ksr2kinase suppressor of ras 2123880279639187809Rat
7690921LOC102553848acyl-CoA-binding protein-like123916391139166637Rat
41144339LOC120096110small nucleolar RNA SNORA44123917006639170174Rat
1309280Rfc5replication factor C subunit 5123920748439217041Rat
1359599Wsb2WD repeat and SOCS box-containing 2123921764539238634Rat
1565800Vsig10V-set and immunoglobulin domain containing 10123924133239277302Rat
41286864LOC120095992uncharacterized LOC120095992123929703739299789Rat
62017Pebp1phosphatidylethanolamine binding protein 1123930286439307064Rat
1562861Taok3TAO kinase 3123931235439473656Rat
1305986Suds3SDS3 homolog, SIN3A corepressor complex component123947718139499633Rat
41302376LOC120095860uncharacterized LOC120095860123954554239550167Rat
7675930LOC102554374uncharacterized LOC102554374123958115039583257Rat
41022248Ralgds-ps2ral guanine nucleotide dissociation stimulator, pseudogene 2123959944239601966Rat
11384875LOC108352460uncharacterized LOC108352460123972087239738789Rat
11392975LOC108352461uncharacterized LOC108352461123975780739762662Rat
41224417LOC120095994uncharacterized LOC120095994123977578539778923Rat
41006442Trnap-agg39transfer RNA proline (anticodon AGG) 39123982158039821660Rat
1586300Rps17-ps13ribosomal protein S17, pseudogene 13123984069739841104Rat
40940667LOC120095861uncharacterized LOC120095861123998232839985866Rat
1560213Srrm4serine/arginine repetitive matrix 4123999897540158897Rat
41210682Srrm4lserine/arginine repetitive matrix 4 like124008044840089556Rat
41223566LOC120095997uncharacterized LOC120095997124014457340154268Rat
71003Hspb8heat shock protein family B (small) member 8124017640540205002Rat
1564283Ccdc60coiled-coil domain containing 60124031468740480338Rat
7573533LOC102547467uncharacterized LOC102547467124052563240530747Rat
1597489Tmem233transmembrane protein 233124052851540569611Rat
71057Prkab1protein kinase AMP-activated non-catalytic subunit beta 1124058814040598673Rat
70878Citcitron rho-interacting serine/threonine kinase124060307340764846Rat
41305748LOC120095998uncharacterized LOC120095998124068503440687548Rat
41176153LOC120095999uncharacterized LOC120095999124076501740766408Rat
1583822Rplp2-ps3ribosomal protein lateral stalk subunit P2, pseudogene 3124077924240779611Rat
7602651LOC102547619uncharacterized LOC102547619124083750140841544Rat
41141300Trnap-agg85transfer RNA proline (anticodon AGG) 85124086773140867803Rat
1310292Bicdl1BICD family like cargo adaptor 1124087819041001152Rat
1306362Rab35RAB35, member RAS oncogene family124096710240981183Rat
41391313LOC120096002uncharacterized LOC120096002124099020240991987Rat
1593434Gcn1GCN1 activator of EIF2AK4124099151241052661Rat
621247Rplp0ribosomal protein lateral stalk subunit P0124105436341057632Rat
1305759Pxnpaxillin124106079141107952Rat
1586247Rps5-ps2ribosomal protein S5, pseudogene 2124112221641122678Rat
41135141LOC120096084U4 spliceosomal RNA124112523641125376Rat
1310413Sirt4sirtuin 4124112553341139440Rat
41129606LOC120096085U4 spliceosomal RNA124112605041126190Rat
61949Pla2g1bphospholipase A2 group IB124114219341151967Rat
628778Msi1musashi RNA-binding protein 1124115830141251134Rat
7521930LOC102547958uncharacterized LOC102547958124121668041218713Rat
41083923Tmem258-ps2transmembrane protein 258, pseudogene 2124124874241248974Rat
2384Cox6a1cytochrome c oxidase subunit 6A1124126198341265037Rat
1586233Triap1TP53 regulated inhibitor of apoptosis 1124126753441270053Rat
1309698Gatcglutamyl-tRNA amidotransferase subunit C124127009641278067Rat
1309495Srsf9serine and arginine rich splicing factor 9124127822541284502Rat
619866Dynll1dynein light chain LC8-type 1124131236541316157Rat
1310857Coq5coenzyme Q5, methyltransferase124131692241333855Rat
41271627LOC120096006uncharacterized LOC120096006124131798441326372Rat
1309282Rnf10ring finger protein 10124134170841375505Rat
1311819Pop5POP5 homolog, ribonuclease P/MRP subunit124137675541384882Rat
620385Cabp1calcium binding protein 1124138523441448930Rat
7733874LOC102548245uncharacterized LOC102548245124145039141458033Rat
1307736Mlecmalectin124145823441468710Rat
1309359Unc119bunc-119 lipid binding chaperone B124147880841491432Rat
620514Acadsacyl-CoA dehydrogenase short chain124149365041502897Rat
1562826Sppl3signal peptide peptidase like 3124151563541600079Rat
3828Hnf1aHNF1 homeobox A124163853641672806Rat
1311899C12h12orf43similar to human chromosome 12 open reading frame 43124167208941677722Rat
1308586Oasl2'-5'-oligoadenylate synthetase-like124168290041695641Rat
1307351Oasl22'-5' oligoadenylate synthetase-like 2124171007241722687Rat
40977867LOC120096007uncharacterized LOC120096007124171075041711987Rat
15851034930519G04RiklRIKEN cDNA 4930519G04 gene like124173258441755507Rat
41169401LOC120096122small nucleolar RNA SNORA26124178910941789229Rat
1560398C12h12orf76similar to human chromosome 12 open reading frame 76124179133941796200Rat
1308577Ankrd13aankyrin repeat domain 13a124179819641828327Rat
1359708Git2GIT ArfGAP 2124182971741872621Rat
1310813Tchptrichoplein, keratin filament binding124187788841893264Rat
7614337LOC102547088uncharacterized LOC102547088124188522641893935Rat
1564442Gltpglycolipid transfer protein124190716841927321Rat
69337Trpv4transient receptor potential cation channel, subfamily V, member 4124193853341977517Rat
1565883Fam222afamily with sequence similarity 222, member A124198206442033085Rat
41342743Trnaa-agc100transfer RNA alanine (anticodon AGC) 100124205777642057856Rat
621295Mvkmevalonate kinase124214139142158893Rat
1596242Mmabmetabolism of cobalamin associated B124215910942172518Rat
1583074Ube3bubiquitin protein ligase E3B124218375642230094Rat
1591979Kctd10potassium channel tetramerization domain containing 10124223015942248792Rat
1596237Myo1hmyosin IH124224894242300103Rat
1306389Foxn4forkhead box N4124233670642359932Rat
620500Acacbacetyl-CoA carboxylase beta124236580042477651Rat
1307200Unguracil-DNA glycosylase124248527642494217Rat
1306377Alkbh2alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase124249418742500929Rat
1307949Usp30ubiquitin specific peptidase 30124250134542555311Rat
9134602LOC103691493legumain pseudogene124251272942515162Rat
620277SvopSV2 related protein124253099142589381Rat
621138DaoD-amino-acid oxidase124259234242613046Rat
1306038Ssh1slingshot protein phosphatase 1124262112742683262Rat
1564490Coro1ccoronin 1C124271302442785179Rat
1307971Selplgselectin P ligand124279669042809908Rat
11488632LOC108352466uncharacterized LOC108352466124282335442828468Rat
1307573Tmem119transmembrane protein 119124282862142835678Rat
1309562Iscuiron-sulfur cluster assembly enzyme124285230542858150Rat
1311646Sart3spliceosome associated factor 3, U4/U6 recycling protein124285902642887041Rat
1359391FicdFIC domain protein adenylyltransferase124288919542894090Rat
41146318LOC120096010uncharacterized LOC120096010124289598742905233Rat
41126926LOC120095862uncharacterized LOC120095862124291496742917606Rat
41112434LOC120095863uncharacterized LOC120095863124293720242938352Rat
69359Cmklr1chemerin chemokine-like receptor 1124297446243027321Rat
41284396LOC120096012uncharacterized LOC120096012124299611643005468Rat
1589744Wscd2WSC domain containing 2124304654743141115Rat
11399194LOC108352468uncharacterized LOC108352468124324982943255567Rat
7737437LOC102551333uncharacterized LOC102551333124325562443267196Rat
11419569LOC108352469uncharacterized LOC108352469124330133043312674Rat
1308178Sgsm1small G protein signaling modulator 1124332050043386469Rat
1584759Lhfpl7LHFPL tetraspan subfamily member 7124339316643397472Rat
11360541LOC108352470uncharacterized LOC108352470124339939643404333Rat
1306556Kiaa1671KIAA1671 homolog124340947943552152Rat
7504255LOC102552141uncharacterized LOC102552141124349164443496898Rat
61980Crybb3crystallin, beta B3124355710343562120Rat
2417Crybb2crystallin, beta B2124356974743579671Rat
2063Grk3G protein-coupled receptor kinase 3124362477843735375Rat
1594542Myo18bmyosin XVIIIb124374700343953694Rat
40948516LOC120096092U6 spliceosomal RNA124393887243938978Rat
1563628Sez6lseizure related 6 homolog like124406490144221814Rat
7572423Ccdc121l2coiled-coil domain containing 121 like 2124419044544192331Rat
1306020Asphd2aspartate beta-hydroxylase domain containing 2124424813244258653Rat
1308070Hps4HPS4, biogenesis of lysosomal organelles complex 3 subunit 2124426403744294791Rat
1562579SrrdSRR1 domain containing124429467544300287Rat
1311449Tfip11tuftelin interacting protein 11124429961944311851Rat
1305331Tpst2tyrosylprotein sulfotransferase 2124432187544363892Rat
2416Crybb1crystallin, beta B1124436973444383344Rat
61962Cryba4crystallin, beta A4124437873444393226Rat
7567380Miatmyocardial infarction associated transcript124441462044429852Rat
41003863LOC120095864uncharacterized LOC120095864124459700844604029Rat
41330200LOC120096014uncharacterized LOC120096014124461576544629531Rat
7719161LOC102552958uncharacterized LOC102552958124505886645110805Rat
6487645LOC100912310uncharacterized LOC100912310124511013045111784Rat
1565571Mn1MN1 proto-oncogene, transcriptional regulator124518179445220959Rat
620143Pitpnbphosphatidylinositol transfer protein, beta124524930845298388Rat
7646113LOC102554233uncharacterized LOC102554233124531866245323525Rat
1594541Ttc28tetratricopeptide repeat domain 28124534298645783968Rat
7498681LOC102553561uncharacterized LOC102553561124543574645440054Rat
41327822LOC120096015uncharacterized LOC120096015124560248545609252Rat
621543Chek2checkpoint kinase 2124578882345821382Rat
1311005HscbHscB mitochondrial iron-sulfur cluster co-chaperone124582152745831902Rat
1589743Ulk1unc-51 like autophagy activating kinase 1124585171045877966Rat
41264338LOC120096017uncharacterized LOC120096017124587949645891762Rat
1311871Pus1pseudouridine synthase 1124588036445889196Rat
1304733Ep400E1A binding protein p400124589188646002523Rat
2323766Rpa3l1replication protein A3 like 1124590865345909063Rat
41028659LOC120096100U6 spliceosomal RNA124592787045927963Rat
41255462Snora49small nucleolar RNA, H/ACA box 49124597088445971016Rat
1309580Ddx51DEAD-box helicase 51124601130346015989Rat
1310661Noc4lnucleolar complex associated 4 homolog124601607746020615Rat
1311523Galnt9polypeptide N-acetylgalactosaminyltransferase 9124605039546128626Rat
1563342Fbrsl1fibrosin-like 1124623146646320607Rat
2323402Lrcol1leucine rich colipase-like 1124632604946339475Rat
620251P2rx2purinergic receptor P2X 2124633897946342891Rat
1594540PoleDNA polymerase epsilon, catalytic subunit124634542046393984Rat
41272572LOC120096104small nucleolar RNA SNORA70124635348746353605Rat
61812Pxmp2peroxisomal membrane protein 2124639405146404561Rat
1312028Pgam5PGAM family member 5, mitochondrial serine/threonine protein phosphatase124640932446416410Rat
1310191Ankle2ankyrin repeat and LEM domain containing 2124641814246451304Rat
1305262Golga3golgin A3124645240946500509Rat
1306360Chfrcheckpoint with forkhead and ring finger domains124650449746538104Rat
2318406Zfp605zinc finger protein 605124654277146575074Rat
1305954Gtpbp6GTP binding protein 6 (putative)124657491346578873Rat
1560935Plcxd1phosphatidylinositol-specific phospholipase C, X domain containing 1124657891746582181Rat
6485295B230307C23RiklRIKEN cDNA B230307C23 gene like124658163546584934Rat
7726977Zfp950l15zinc finger protein 950 like 15124661138746617098Rat
1583821Ube2n-ps2ubiquitin-conjugating enzyme E2N, pseudogene 2124662451146626198Rat
41274962LOC120096018uncharacterized LOC120096018124662632246631633Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10125DXMgh7230123381916733819400Ratregion
10888D12Wox1092122089438020894469Ratregion
10990D12Mco2240123871454038714782Ratregion
11051D12Mit2217121961087019611091Ratregion
11052D12Wox11196121961088619611090Ratregion
11053D12Wox12198121961088919611095Ratregion
33911D12Mit6139121235161912351758Ratregion
33955D1Mit22124123140994231410080Ratregion
33961D12Mit5180121235161912351752Ratregion
33963D12Mit4198123819280938193007Ratregion
34017D12Mit9142122184936621849508Ratregion
34070D12Mgh7138123569808835698226Ratregion
34086D12Mgh9135124021838040218516Ratregion
34246D12Mgh3118122423477724234895Ratregion
34389D12Mgh10138123769148537691617Ratregion
34417D12Mgh2163121983578919835952Ratregion
34729D12Mgh5132122806443328064557Ratregion
11281D12Wox15123609153336091690Ratregion
11282D12Arb7340123609137936091727Ratregion
11396D12Mgh11148124164428741644437Ratregion
11449D12Wox14158122200342822003586Ratregion
11450D12Mgh12140122199658621996726Ratregion
11451D12Mgh13145122200341122003550Ratregion
33725D12Mit1259121502494215025183Ratregion
36025D12Rat23154122413905724139202Ratregion
36101D12Rat15152122830212328302290Ratregion
36119D12Rat94265122905763229057901Ratregion
36125D12Rat14185122862266528622828Ratregion
36221D12Rat4292121238654912386833Ratregion
36344D12Mit10121122363264523632770Ratregion
37250D12Rat26201122269248122692658Ratregion
37272D12Rat28120121580606515806191Ratregion
37278D12Rat44203124650531046505484Ratregion
37318D12Rat29150121731067817310845Ratregion
37334D12Rat46142123039512130395279Ratregion
37346D12Rat27205122481210124812308Ratregion
37366D12Rat54115123579702135797136Ratregion
37478D12Rat43243121107382511074078Ratregion
35431D12Rat22168124589883845899022Ratregion
35433D12Rat17149123082724630827399Ratregion
35479D12Rat8158122277945922779600Ratregion
35501D12Rat21671293182169318387Ratregion
36805D12Rat13170122482568624825856Ratregion
36818D12Rat25140123921527439215414Ratregion
37080D12Rat21200124276752942767729Ratregion
37830D12Rat36200123210317432103380Ratregion
37874D12Rat31235123907476839075003Ratregion
37878D12Rat33221122114617721146418Ratregion
36490D12Rat18161123470242634702587Ratregion
36538D12Rat7161121994867819948839Ratregion
36671D12Rat19164123663807336638233Ratregion
36755D12Rat11165122495666924956834Ratregion
36795D12Rat24174123237617132376345Ratregion
34801D12Rat3148121181215911812311Ratregion
34898D12Rat20154124324932943249483Ratregion
35126D12Rat16170123042710330427275Ratregion
35889D12Rat10155122367192823672083Ratregion
39620D12Rat80126124102719341027317Ratregion
39626D12Rat75215122649713826497355Ratregion
39712D12Rat86185123828359538283779Ratregion
39740D12Rat85212123684381936844031Ratregion
39844D12Rat76109122830650928306601Ratregion
39886D12Rat65202121144446611444665Ratregion
38052D12Rat37165121037299310373166Ratregion
38084D12Rat96214123165732831657530Ratregion
38094D12Rat47209121507055115070761Ratregion
38108D12Rat50244123395926833959512Ratregion
40408D12Rat91160121587265315872803Ratregion
40454D12Rat100133123445246134452594Ratregion
40668D12Rat78216123088000030880206Ratregion
40702D12Rat69211121995043219950632Ratregion
38404D12Rat45248122515746025157706Ratregion
38410D12Rat53134124282875842828880Ratregion
38658D12Rat49117124520748845207619Ratregion
38730D12Rat55205124077062740770822Ratregion
38736D12Rat48201123615449136154692Ratregion
40112D12Rat84167123491883334919000Ratregion
40214D12Rat83158122663672426636867Ratregion
38952D12Rat401201271967307196840Ratregion
38952D12Rat401201271967307196840Ratregion
39026D12Rat34223121106751711067730Ratregion
39060D12Rat30201123297403632974238Ratregion
39218D12Rat35200122291940222919596Ratregion
39236D12Rat51213122127306221273283Ratregion
39330D12Rat39215121290184612902077Ratregion
39332D12Rat52181123531231335312458Ratregion
39416D12Rat87208123875734038757548Ratregion
39446D12Rat99231122573546425735691Ratregion
41960D12Arb21701285254238525593Ratregion
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Position Markers

Flank 1: (D12Rat12)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01227,911,196 - 27,911,339NCBI
RGSC_v3.41225,802,539 - 25,802,828RGD
RGSC_v3.41225,802,584 - 25,802,727UniSTS
RGSC_v3.11225,665,800 - 25,665,943RGD
Celera1226,588,247 - 26,588,390UniSTS
RH 3.4 Map12424.3UniSTS
RH 3.4 Map12424.3RGD
RH 2.0 Map12297.9RGD
SHRSP x BN Map1227.31RGD
FHH x ACI Map1212.29RGD
Cytogenetic Map12q12UniSTS
Peak: (D12Rat20)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21243,249,329 - 43,249,483 (+)MAPPER
Rnor_6.01249,042,299 - 49,042,452NCBI
Rnor_5.01250,818,953 - 50,819,106UniSTS
RGSC_v3.41244,254,904 - 44,255,057UniSTS
RGSC_v3.41244,254,684 - 44,255,091RGD
RGSC_v3.11244,118,072 - 44,118,479RGD
Celera1244,846,961 - 44,847,114UniSTS
RH 2.0 Map12460.7RGD
SHRSP x BN Map1251.87RGD
Flank 2: (D12Rat40)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2127,196,730 - 7,196,840 (-)MAPPER
mRatBN7.2127,196,730 - 7,196,840 (+)MAPPER
Rnor_6.0128,954,484 - 8,954,593NCBI
Rnor_6.0128,781,483 - 8,781,592NCBI
Rnor_5.01210,898,188 - 10,898,297UniSTS
Rnor_5.01211,072,360 - 11,072,469UniSTS
RGSC_v3.4127,754,568 - 7,754,826RGD
RGSC_v3.4127,754,593 - 7,754,702UniSTS
RGSC_v3.1127,784,521 - 7,784,630RGD
Celera128,939,886 - 8,939,995UniSTS
RH 3.4 Map1274.7RGD
RH 3.4 Map1274.7UniSTS
RH 2.0 Map1261.4RGD
SHRSP x BN Map1211.64RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)121914436246669029Rat
61443Btemp2Thermal response to stress QTL 23.30.000094body temperature trait (VT:0005535)core body temperature (CMO:0001036)121502518320794014Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)121961087046669029Rat
1331739Hrtrt14Heart rate QTL 143.56232heart pumping trait (VT:2000009)heart rate (CMO:0000002)12931821612829686Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
737822Alc10Alcohol consumption QTL 102.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)121961087040218516Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)121587265332974238Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123297788Rat
70169Eae13Experimental allergic encephalomyelitis QTL 130.032nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)122413920236638073Rat
1600386Calcic2Intracellular calcium level QTL 20.001platelet physiology trait (VT:0005464)platelet intracellular calcium level (CMO:0000922)122806443346669029Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
1556747Calcic1Intracellular calcium level QTL 13.6platelet calcium amount (VT:0010500)platelet intracellular calcium level (CMO:0000922)122806443340130419Rat
631829Alc6Alcohol consumption QTL 64.7consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)122860752637691617Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12134851688Rat
1600391Edcs2Endometrial carcinoma susceptibility QTL23.50.01uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)12683319017870186Rat
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12122591684Rat
724526Uae3Urinary albumin excretion QTL 34.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)12390696910373166Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382545055165Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
1331763Wbc2White blood cell count QTL 23.162leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)122423477731894213Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
1300157Rf21Renal function QTL 214.4renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)12931821632103380Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961088935682913Rat
7243862Mcs30Mammary carcinoma susceptibility QTL 308.62mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)127977298525593Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121047413746669029Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
1331755Bp219Blood pressure QTL 2193.041arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382528064557Rat
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121983578938193007Rat
2306789Ean6Experimental allergic neuritis QTL 64.9nervous system integrity trait (VT:0010566)experimental autoimmune neuritis severity score (CMO:0001528)121961087024139202Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411643Foco20Food consumption QTL 200.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)122032881946669029Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961087042828880Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101318273646669029Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121319815746669029Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
1300162Bp188Blood pressure QTL 1883.19arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)123210317445899022Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
1549902Bp269Blood pressure QTL 269arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121318273646669029Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121235161946669029Rat
1300175Cm5Cardiac mass QTL 53.78heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)122806443345899022Rat
1300174Bw15Body weight QTL 152.93body mass (VT:0001259)body weight loss (CMO:0001399)1219318387Rat
1331786Kidm11Kidney mass QTL 113.571kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)121107382524234895Rat
1331787Rf41Renal function QTL 412.998kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)122806455740218380Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121047413746669029Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
61416Pia4Pristane induced arthritis QTL 48.4joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)121363552330827399Rat
631521Pia12Pristane induced arthritis QTL 128.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)122025941723672083Rat
7204484Bp358Blood pressure QTL 3580.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121300829619212979Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121363552335682913Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121281238546669029Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12844949028302290Rat
631543Bp83Blood pressure QTL 835.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121555082638478808Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Scl21


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-06-24 Scl21  Serum cholesterol level QTL 21  Scl21  Serum cholesterol QTL 21  Name updated 68913 APPROVED
2012-10-01 Scl21  Serum cholesterol QTL 21  Scl21  Serum cholesterol QTL 21  Name updated 68913 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_general homozygous HTG genotype is associated with lower total cholesterol levels than heterozygous or homozygous LEW genotypes 1299960
qtl_general QTL displays male sex-specificity 1299960
qtl_general LOD 3.3 was observed in F2 male rats 1299960
qtl_general number of animals used: 5-6 months old 266 F2 rats 1299960
qtl_general software used: one-way analysis of variance (ANOVA) 1299960
qtl_general measurement method: polyethylene catheters were inserted in the carotid artery and blood was drawn 1299960