Bp218 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bp218 (Blood pressure QTL 218) Rattus norvegicus

Symbol: Bp218
Name: Blood pressure QTL 218
RGD ID: 1331761
Previously known as: Specialized Center of Research QTL 82; SCOR82
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: mean arterial blood pressure   (CMO:0000009)    
LOD Score: 2.973
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81216,187,438 - 51,213,550RGD_MAPPER_PIPELINE
mRatBN7.21211,073,825 - 45,055,165RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01213,127,211 - 50,320,041RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01215,169,677 - 52,125,243RGDRnor5.0
RGSC_v3.41211,416,955 - 46,782,294RGDRGSC3.4
RGSC_v3.11211,446,884 - 46,540,376RGD
Cross Type: Not Available
Strains Crossed: BN/SsNHsd SS/JrHsdMcwi 
JBrowse: View Region in Genome Browser (JBrowse)
Model




  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp218Rathypertension  IAGP 70849 RGD 

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp218Ratincreased systemic arterial blood pressure  IAGP 70849 RGD 

Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp218Ratmean arterial blood pressure  IDA 70849 RGD 

Experimental Condition
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp218Ratcontrolled sodium content diet  IDA 70849 RGD 

Measurement Method
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp218Ratvascular indwelling catheter method  IDA 70849 RGD 

Rat Strain
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp218RatBN/SsNHsd  IEA 70849 RGD 
Bp218RatSS/JrHsdMcwi  IEA 70849 RGD 

Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp218Ratarterial blood pressure trait  IDA 70849 RGD 


#
Reference Title
Reference Citation
1. A genomic-systems biology map for cardiovascular function. Stoll M, etal., Science 2001 Nov 23;294(5547):1723-6.

Related QTL Description Reference
Wbc2 maps to same region RGD:70849
Bp219 maps to same region RGD:70849
Hrtrt14 maps to same region RGD:70849
Rf41 maps to same region RGD:70849



1 to 20 of 728 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1310193Daglbdiacylglycerol lipase, beta121105973211102170Rat
1304618Kdelr2KDEL endoplasmic reticulum protein retention receptor 2121113882011157117Rat
1310492Grid2ipGrid2 interacting protein121116656711203765Rat
1308389Zdhhc4zinc finger DHHC-type palmitoyltransferase 4121123086411244898Rat
1584479Ints15integrator complex subunit 15121124504511260170Rat
11371857LOC108352423uncharacterized LOC108352423121125474711258556Rat
1563095Zfp853zinc finger protein 853121126612411276492Rat
1311647Zfp316zinc finger protein 316121129444511313841Rat
1564396Zfp12zinc finger protein 12121131697111330498Rat
1561076Spdye4speedy/RINGO cell cycle regulator family member E4121133726211344753Rat
7634033Spdye4-ps1speedy/RINGO cell cycle regulator family member E4, pseudogene 1121135951011373943Rat
1562875RbakRB-associated KRAB zinc finger121137531411388937Rat
7637009LOC102555525uncharacterized LOC102555525121139674711397774Rat
2322117Rpl36l5ribosomal protein L36 like 5121140837911408767Rat
1565135Rnf216ring finger protein 216121145475211576305Rat
41204650LOC120095834uncharacterized LOC120095834121150554911508629Rat
1583309Fscn1fascin actin-bundling protein 1121159704211610183Rat
41297723LOC120095835uncharacterized LOC120095835121160012611602621Rat
41050335LOC120095836uncharacterized LOC120095836121163259611640692Rat
628837Actbactin, beta121166311211666697Rat

1 to 20 of 728 rows
1 to 20 of 1126 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match
10125DXMgh7230123381916733819400Ratregion
10888D12Wox1089122089438020894469Ratregion
10990D12Mco2242123871454038714782Ratregion
11051D12Mit2217121961087019611091Ratregion
11052D12Wox11200121961088619611090Ratregion
11053D12Wox12202121961088919611095Ratregion
33911D12Mit6139121235161912351758Ratregion
33955D1Mit22124123140994231410080Ratregion
33961D12Mit5133121235161912351752Ratregion
33963D12Mit4198123819280938193007Ratregion
34017D12Mit9142122184936621849508Ratregion
34070D12Mgh7138123569808835698226Ratregion
34086D12Mgh9135124021838040218516Ratregion
34246D12Mgh3118122423477724234895Ratregion
34389D12Mgh10132123769148537691617Ratregion
34417D12Mgh2163121983578919835952Ratregion
34729D12Mgh5124122806443328064557Ratregion
11281D12Wox15157123609153336091690Ratregion
11282D12Arb7340123609137936091727Ratregion
11396D12Mgh11150124164428741644437Ratregion
1 to 20 of 1126 rows

Flank 1: (D12Rat43)
Rat AssemblyChrPosition (strand)Source
GRCr81216,187,438 - 16,187,691 (+)Marker Load Pipeline
mRatBN7.21211,073,825 - 11,074,078 (+)MAPPER
Rnor_6.01213,127,211 - 13,127,463NCBI
Rnor_5.01215,169,677 - 15,169,929UniSTS
RGSC_v3.41211,416,955 - 11,417,208RGD
RGSC_v3.41211,416,956 - 11,417,208UniSTS
RGSC_v3.11211,446,884 - 11,447,136RGD
Celera1212,867,560 - 12,867,812UniSTS
RH 3.4 Map12151.7UniSTS
RH 3.4 Map12151.7RGD
RH 2.0 Map12118.0RGD
SHRSP x BN Map1213.63RGD
Cytogenetic Map12p11UniSTS
Peak: (D12Mgh5)
Rat AssemblyChrPosition (strand)Source
GRCr81233,700,432 - 33,700,556 (+)Marker Load Pipeline
mRatBN7.21228,064,433 - 28,064,557 (+)MAPPER
Rnor_6.01231,723,565 - 31,723,688NCBI
Rnor_5.01233,647,399 - 33,647,522UniSTS
RGSC_v3.41229,130,181 - 29,130,304UniSTS
RGSC_v3.41229,130,180 - 29,130,304RGD
RGSC_v3.11228,993,569 - 28,993,692RGD
Celera1229,756,877 - 29,756,993UniSTS
RH 3.4 Map12466.8UniSTS
RH 3.4 Map12466.8RGD
RH 2.0 Map12343.2RGD
SHRSP x BN Map1231.95RGD
Cytogenetic Map12 RGD
Flank 2: (D12Mgh8)
Rat AssemblyChrPosition (strand)Source
Celera1245,656,280 - 45,656,420UniSTS
RH 3.4 Map19159.51UniSTS
RH 3.4 Map19159.51RGD
RH 2.0 Map12554.2RGD


1 to 10 of 70 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)121914436246669029Rat
61443Btemp2Thermal response to stress QTL 23.30.000094body temperature trait (VT:0005535)core body temperature (CMO:0001036)121502518320794014Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
8693635Alc28Alcohol consumption QTL 282.70.439drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)122308134044726024Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)121961087046669029Rat
1331739Hrtrt14Heart rate QTL 143.56232heart pumping trait (VT:2000009)heart rate (CMO:0000002)12931821612829686Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
737822Alc10Alcohol consumption QTL 102.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)121961087040218516Rat

1 to 10 of 70 rows


Database
Acc Id
Source(s)
NCBI Gene Bp218

Note Type Note Reference
qtl_general arterial pressure, mean of last two steady state minutes of control period (SCOR82) 70849
qtl_general additional information, including phenotype and mapping information, can be found at A genomics-systems biology map for cardiovascular function 70849