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Gene: Tmem116 (transmembrane protein 116) Rattus norvegicus
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Symbol: Tmem116
Name: transmembrane protein 116
Description: Predicted to localize to integral component of membrane. Orthologous to human TMEM116 (transmembrane protein 116); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: hypothetical protein LOC690442; hypothetical protein LOC690455; LOC690442; LOC690455
Orthologs:
Homo sapiens (human) : TMEM116 (transmembrane protein 116)  HGNC  Alliance
Mus musculus (house mouse) : Tmem116 (transmembrane protein 116)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tmem116 (transmembrane protein 116)
Pan paniscus (bonobo/pygmy chimpanzee) : TMEM116 (transmembrane protein 116)
Canis lupus familiaris (dog) : TMEM116 (transmembrane protein 116)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tmem116 (transmembrane protein 116)
Sus scrofa (pig) : TMEM116 (transmembrane protein 116)
Chlorocebus sabaeus (African green monkey) : TMEM116 (transmembrane protein 116)
Heterocephalus glaber (naked mole-rat) : Tmem116 (transmembrane protein 116)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01240,537,261 - 40,618,805 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1240,557,677 - 40,590,361 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01242,403,957 - 42,485,861 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41236,176,676 - 36,209,989 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1236,705,977 - 36,739,335 (-)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tmem116
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1596066
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.