Eau2 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL Registration

QTL: Eau2 (Experimental allergic uveoretinitis QTL 2) Rattus norvegicus

Symbol: Eau2
Name: Experimental allergic uveoretinitis QTL 2
RGD ID: 61331
Trait: uvea integrity trait   (VT:0010551)    
Measurement Type: experimental autoimmune uveitis score   (CMO:0001504)    
LOD Score: Not Available
P Value: 5.0E-4
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01210,256,890 - 31,723,732RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01212,361,595 - 33,647,566RGDRnor5.0
RGSC_v3.4121 - 29,130,348RGDRGSC3.4
RGSC_v3.1120 - 28,993,736RGD
Cross Type: F2
Strains Crossed: LEW F344/NRrrc 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
F344/NRrrc  (IEA)
LEW  (IEA)

References

Related QTLs

Related QTL Description Reference
Pia4 interacts with RGD:61073
Cia12 interacts with RGD:61073


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
68333Gpr12G protein-coupled receptor 12121025371010257135Rat
1591435LOC684377hypothetical protein LOC684377121028009310281265Rat
1592807Wasf3WASP family member 3121029789610391014Rat
1590340LOC684427similar to Histidine triad nucleotide-binding protein 1 (Adenosine 5-monophosphoramidase) (Protein kinase C inhibitor 1) (Protein kinase C-interacting protein 1) (PKCI-1)121039626810396687Rat
1560888Cdk8cyclin-dependent kinase 8121049627310561335Rat
1306092Rnf6ring finger protein 6121057416810583196Rat
9375809LOC10369102260S ribosomal protein L21 pseudogene121058722910596429Rat
628709Cyp3a18cytochrome P450, family 3, subfamily a, polypeptide 18121063629410684273Rat
1595705Cyp3a73cytochrome P450, family 3, subfamily a, polypeptide 73121071340610729011Rat
1583820LOC363933similar to heat shock protein 1, alpha121075246810754702Rat
9074083LOC103691023uncharacterized LOC103691023121077506410777010Rat
1595706Cyp3a85-pscytochrome P450, family 3, subfamily a, polypeptide 85, pseudogene121077879010789261Rat
1597309Cyp3a71-pscytochrome P450, family 3, subfamily a, polypeptide 71, pseudogene121089852910931152Rat
6488928LOC100912059ubiquitin carboxyl-terminal hydrolase 12-like121096330010967320Rat
7653309LOC10255348360S ribosomal protein L29-like121097319410977749Rat
6489468LOC100912029pumilio domain-containing protein KIAA0020 homolog121097779110979781Rat
9312109LOC103693618uncharacterized LOC103693618121102416111028088Rat
628626Cyp3a23-3a1cytochrome P450, family 3, subfamily a, polypeptide 23-polypeptide 1121105388811082742Rat
11518998LOC10835249160S ribosomal protein L29 pseudogene121107547511076031Rat
1589159LOC684526similar to developmental pluripotency associated 4 isoform 1121108384111085036Rat
9342065LOC103693617zinc finger and SCAN domain-containing protein 25 pseudogene121110429011109040Rat
7733656LOC102554162uncharacterized LOC102554162121112068911124333Rat
1309158Zfp655zinc finger protein 655121112277911146182Rat
1311175Zkscan5zinc finger with KRAB and SCAN domains 5121115480711176002Rat
628654Zfp394zinc finger protein 394121117932311187362Rat
1596067Atp5mfATP synthase membrane subunit f121119179911198369Rat
620440Cpsf4cleavage and polyadenylation specific factor 4121119989311215690Rat
1311473Ptcd1pentatricopeptide repeat domain 1121121579511233633Rat
621103Bud31BUD31 homolog121123296311240449Rat
620442Pdap1PDGFA associated protein 1121124077511251002Rat
2155Arpc1bactin related protein 2/3 complex, subunit 1B121125230011265849Rat
620834Arpc1aactin related protein 2/3 complex, subunit 1A121127260911294084Rat
9089364LOC103691024uncharacterized LOC103691024121128909811293278Rat
1596017Rps15al1ribosomal protein S15A-like 1121130228811303027Rat
11440668LOC108352477U1 small nuclear ribonucleoprotein C pseudogene121134145111341929Rat
1594749Kpna7karyopherin subunit alpha 7121134763111378810Rat
1594738Smurf1SMAD specific E3 ubiquitin protein ligase 1121143381511526465Rat
1305446Trraptransformation/transcription domain-associated protein121153795011627563Rat
708379Cyp3a2cytochrome P450, family 3, subfamily a, polypeptide 2121164150011677818Rat
6495986LOC100910877cytochrome P450 3A1-like121170359411733129Rat
11430784LOC10835242160S ribosomal protein L29 pseudogene121172559911726155Rat
1596095LOC690410similar to developmental pluripotency associated 4 isoform 1121173420111735397Rat
1308619Zscan25zinc finger and SCAN domain containing 25121177492011785530Rat
11383156LOC108352422uncharacterized LOC108352422121179743311801077Rat
9264030LOC103690102zinc finger protein 655-like121180336511809495Rat
1563248Tmem130transmembrane protein 130121181407111840100Rat
1309447Nptx2neuronal pentraxin 2121201463812025547Rat
9241109LOC103693619uncharacterized LOC103693619121213389712134963Rat
2322550LOC100360200cleavage and polyadenylation specific factor 4121216859812189946Rat
1565131RGD1565131similar to ribosomal protein L15121220361412204546Rat
1308452Baiap2l1BAR/IMD domain containing adaptor protein 2 like 1121222696712321172Rat
9081796LOC103693623ubiquitin-conjugating enzyme E2 N-like121228590612286872Rat
1309187Bri3brain protein I3121232224712330929Rat
7638517LOC102554669uncharacterized LOC102554669121233040112338817Rat
1306873Tecpr1tectonin beta-propeller repeat containing 1121237413212403382Rat
3091Bhlha15basic helix-loop-helix family, member a15121240338512409103Rat
1598332Lmtk2lemur tyrosine kinase 2121240987612546111Rat
7733985LOC102554735glyceraldehyde-3-phosphate dehydrogenase-like121253476412538375Rat
9185431LOC103691025elongation factor 1-gamma pseudogene121257402012574774Rat
3222Ocmoncomodulin121261112112634472Rat
1306410Ccz1bCCZ1 homolog B, vacuolar protein trafficking and biogenesis associated121263884912662371Rat
1311893Rsph10bradial spoke head 10 homolog B121266519412713834Rat
1305483Pms2PMS1 homolog 2, mismatch repair system component121271439412738654Rat
1560787Aimp2aminoacyl tRNA synthetase complex-interacting multifunctional protein 2121273878412748345Rat
70883Eif2ak1eukaryotic translation initiation factor 2 alpha kinase 1121274902612782078Rat
1586393Ankrd61ankyrin repeat domain 61121275648012760838Rat
7731748LOC102554825uncharacterized LOC102554825121279475412812607Rat
1585013LOC288481hypothetical LOC288481121281533112816669Rat
7505188LOC102554879uncharacterized LOC102554879121283099912839943Rat
1305231Usp42ubiquitin specific peptidase 42121284013112878207Rat
9100467LOC103691027uncharacterized LOC103691027121284779812855374Rat
620399Cyth3cytohesin 3121287755912907771Rat
1561923Fam220afamily with sequence similarity 220, member A121304303813067043Rat
619755Rac1Rac family small GTPase 1121309031613111841Rat
1310193Daglbdiacylglycerol lipase, beta121311307313157748Rat
1304618Kdelr2KDEL endoplasmic reticulum protein retention receptor 2121319245213210758Rat
7610051LOC102554945uncharacterized LOC102554945121321086613212161Rat
1310492Grid2ipGrid2 interacting protein121322133413257365Rat
7668199LOC102555005uncharacterized LOC102555005121326045113263666Rat
1308389Zdhhc4zinc finger DHHC-type palmitoyltransferase 4121328450813298519Rat
1584479LOC683674similar to Protein C7orf26 homolog121329965113313733Rat
11371857LOC108352423uncharacterized LOC108352423121330830913310662Rat
1563095Zfp853zinc finger protein 853121332310213331353Rat
1311647Zfp316zinc finger protein 316121334641413367374Rat
1564396Zfp12zinc finger protein 12121337050413384034Rat
1561076Spdye4speedy/RINGO cell cycle regulator family member E4121339083113398301Rat
7634033LOC102546559speedy protein B-like121341307013422665Rat
1562875RbakRB-associated KRAB zinc finger121342864813442279Rat
7637009LOC102555525uncharacterized LOC102555525121345013113451114Rat
2322117LOC100360439ribosomal protein L36-like121346168313462053Rat
9271212LOC103693627putative olfactory receptor 10AC1121347476713478979Rat
1565135Rnf216ring finger protein 216121350842913631689Rat
9148065LOC103691028uncharacterized LOC103691028121351502213518691Rat
1583309Fscn1fascin actin-bundling protein 1121365545913668595Rat
628837Actbactin, beta121371584313718813Rat
1596958Fbxl18F-box and leucine-rich repeat protein 18121372815513751781Rat
11503703LOC108352424uncharacterized LOC108352424121379974013807609Rat
1307540Tnrc18trinucleotide repeat containing 18121380781913912295Rat
1310545Slc29a4solute carrier family 29 member 4121391411413924511Rat
1359154Wipi2WD repeat domain, phosphoinositide interacting 2121396970413998134Rat
1306506Mmd2monocyte to macrophage differentiation-associated 2121402172414078121Rat
1306155RadilRap associating with DIL domain121409254114156704Rat
1310946Papolbpoly(A) polymerase beta121411242614114772Rat
1593125Ap5z1adaptor related protein complex 5 subunit zeta 1121416199814175997Rat
1309643Foxk1forkhead box K1121418343614244634Rat
9315648LOC103693620AP-5 complex subunit zeta-1-like121421765914218572Rat
6492494LOC100911539glyceraldehyde-3-phosphate dehydrogenase-like121437013114372633Rat
1560686Sdk1sidekick cell adhesion molecule 1121444579815443442Rat
9294120LOC103691029uncharacterized LOC103691029121457328814574118Rat
1564193RGD1564193similar to ubiquitin-conjugating enzyme E2C isoform 3121473586014736979Rat
9463923LOC103693621uncharacterized LOC103693621121505274615053082Rat
7586502LOC102546902protein sidekick-1-like121507416115099097Rat
11371097LOC108352492glyceraldehyde-3-phosphate dehydrogenase pseudogene121520541415207606Rat
11441462LOC108352493glyceraldehyde-3-phosphate dehydrogenase pseudogene121534637915349346Rat
1584808LOC679733similar to Saccharomyces cerevisiae Nip7p homolog121550061015501131Rat
7598302LOC102547234uncharacterized LOC102547234121565848915683523Rat
2323211Card11caspase recruitment domain family, member 11121570060015844512Rat
9299204LOC103691030uncharacterized LOC103691030121587488715879100Rat
71018Gna12G protein subunit alpha 12121589020215971212Rat
1311314Amz1archaelysin family metallopeptidase 1121597521116011238Rat
1565146Brat1BRCA1-associated ATM activator 1121601606216028534Rat
1311349IqceIQ motif containing E121603060716069872Rat
1309549Ttyh3tweety family member 3121608407816112672Rat
620587LfngLFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase121611776716126211Rat
71055Grifingalectin-related inter-fiber protein121617010816172144Rat
1308214Chst12carbohydrate sulfotransferase 12121619997516218404Rat
1598146LOC679924similar to Kif19A CG9913-PB, isoform B121623351216283177Rat
1309018Eif3beukaryotic translation initiation factor 3, subunit B121628573016310190Rat
11502171LOC108352425uncharacterized LOC108352425121631172116354719Rat
1305791Snx8sorting nexin 8121634091716389500Rat
621080Nudt1nudix hydrolase 1121639157816398771Rat
1305944Mrm2mitochondrial rRNA methyltransferase 2121639874916403656Rat
1596881Mad1l1mitotic arrest deficient 1 like 1121641008316721232Rat
1308787Elfn1extracellular leucine-rich repeat and fibronectin type III domain containing 1121674934016813838Rat
11420789LOC108352426uncharacterized LOC108352426121675336516763655Rat
2319950Psmg3proteasome assembly chaperone 3121689899916901945Rat
1306702Tmem184atransmembrane protein 184A121690686316924143Rat
628633MafkMAF bZIP transcription factor K121692398916934706Rat
7519900LOC102546414uncharacterized LOC102546414121693484716937000Rat
1308908Ints1integrator complex subunit 1121695070416974896Rat
1307875Micall2MICAL-like 2121698801317016794Rat
9348290LOC103693622uncharacterized LOC103693622121714456917149588Rat
69361UncxUNC homeobox121718215817186679Rat
1562250LOC498152hypothetical protein LOC498152121721129217232275Rat
11414185LOC108352500nucleophosmin-like121722590717226737Rat
1310991Zfand2azinc finger AN1-type containing 2A121725209317263477Rat
1566418LOC498154hypothetical protein LOC498154121727763517380497Rat
619845Gper1G protein-coupled estrogen receptor 1121730912217315267Rat
7673409LOC102546864uncharacterized LOC102546864121732127017333460Rat
1560731Gpr146G protein-coupled receptor 146121734339617358631Rat
2325466Mir339microRNA 339121736900217369097Rat
1305193Cyp2w1cytochrome P450, family 2, subfamily w, polypeptide 1121738274917387909Rat
1305631Cox19cytochrome c oxidase assembly factor COX19121739562417405103Rat
621418Adap1ArfGAP with dual PH domains 1121741632717468212Rat
1311660Get4guided entry of tail-anchored proteins factor 4121746911217486709Rat
1359142Sun1Sad1 and UNC84 domain containing 1121748848217533334Rat
7682710LOC102547493uncharacterized LOC102547493121752433117525919Rat
1566028Dnaaf5dynein, axonemal, assembly factor 5121754546817584466Rat
3392Prkar1bprotein kinase cAMP-dependent type I regulatory subunit beta121761453617713567Rat
9133748LOC103691050uncharacterized LOC103691050121772066917724292Rat
3282Pdgfaplatelet derived growth factor subunit A121773414117756186Rat
1561329LOC498155LRRGT00167121782466217876435Rat
7536442LOC10254879440S ribosomal protein S27-like121786643017868387Rat
1594158Foxl3forkhead box L3121790204517904348Rat
1311980Fam20cFAM20C, golgi associated secretory pathway kinase121791377117972733Rat
9398138LOC103689975integrator complex subunit 1-like121807398018082353Rat
1566386RGD1566386similar to Hypothetical protein A430033K04121810582118139420Rat
1310463Zfp68zinc finger protein 68121815259618167523Rat
1562569RGD1562569similar to ribosomal protein S8121817437118175092Rat
1625997Vom2r-ps98vomeronasal 2 receptor, pseudogene 98121819143918193408Rat
6497892LOC100910529leukosialin-like121822132318226425Rat
6499499LOC100910238leukosialin-like121822691418228058Rat
1598204LOC501810similar to Leukosialin precursor (Leucocyte sialoglycoprotein) (Sialophorin) (Ly-48) (B cell differentiation antigen LP-3) (CD43 antigen)121823220018253414Rat
6499303LOC100910306leukosialin-like121823739818238667Rat
6498885LOC100910352leukosialin-like121824222618243370Rat
6498015LOC100910564leukosialin-like121824734618248179Rat
1560412RGD1560412similar to Leukosialin precursor (Leucocyte sialoglycoprotein)121825348318258585Rat
1566324RGD1566324similar to Leukosialin precursor (Leucocyte sialoglycoprotein)121825907418260218Rat
9342408LOC103690370leukosialin-like121826436018265744Rat
2319349LOC100361826sialophorin-like121826955818274549Rat
1598203LOC501811similar to Leukosialin precursor (Leucocyte sialoglycoprotein) (Sialophorin) (Ly-48) (B cell differentiation antigen LP-3) (CD43 antigen)121827483918275995Rat
1559964MGC112692similar to Leukosialin precursor (Leucocyte sialoglycoprotein) (Sialophorin) (CD43) (W3/13 antigen)121828085818286468Rat
1598202LOC501812similar to Leukosialin precursor (Leucocyte sialoglycoprotein) (Sialophorin) (Ly-48) (B cell differentiation antigen LP-3) (CD43 antigen)121828677618287903Rat
1359506LOC288521similar to Leukosialin precursor (Leucocyte sialoglycoprotein) (Sialophorin) (CD43) (W3/13 antigen)121829190118303041Rat
1598201LOC501813similar to Leukosialin precursor (Leucocyte sialoglycoprotein) (Sialophorin) (Ly-48) (B cell differentiation antigen LP-3) (CD43 antigen)121830330318310009Rat
6497070LOC100910733leukosialin-like121831006218311344Rat
6494869LOC100911071leukosialin-like121836278318369489Rat
1560474RGD1560474similar to Leukosialin precursor (Leucocyte sialoglycoprotein)121836954218370824Rat
1591744LOC680456similar to autism susceptibility candidate 2121841235018441216Rat
1359435Zfp157zinc finger protein 157121846128318495871Rat
1332710Olr1573-psolfactory receptor pseudogene 1573121850429018505080Rat
1305017Dhrsxdehydrogenase/reductase X-linked121851685818521235Rat
708472Asmtacetylserotonin O-methyltransferase121852138318527036Rat
1564640Akap17aA-kinase anchoring protein 17A121852711618531780Rat
1306877Asmtlacetylserotonin O-methyltransferase-like121853209018534761Rat
628728Il3rainterleukin 3 receptor subunit alpha121853476218542508Rat
1560288RGD1560288similar to DNA segment, Chr 19, Brigham & Womens Genetics 1357 expressed121863351318635365Rat
1595919Cyp3a62cytochrome P450, family 3, subfamily a, polypeptide 62121867980918709397Rat
7641109LOC102554019uncharacterized LOC102554019121870206818756568Rat
7612525LOC102554070uncharacterized LOC102554070121883542818932787Rat
1593752LOC686707similar to tubulin, beta, 2121888431918885386Rat
1584948LOC363883similar to dopamine-responsive protein121889491018896549Rat
1562172Spry3sprouty RTK signaling antagonist 3121893008718940622Rat
621558Vamp7vesicle-associated membrane protein 7121899656619033714Rat
708392Cyp3a9cytochrome P450, family 3, subfamily a, polypeptide 9121907428819114491Rat
1595709LOC498158hypothetical LOC498158121913503619136080Rat
2319106Rpl31l4ribosomal protein L31-like 4121915945819159909Rat
727930Gjc3gap junction protein, gamma 3121916607419177701Rat
7581366LOC102547331coiled-coil domain-containing protein 90B, mitochondrial-like121917242519173649Rat
2187Azgp1alpha-2-glycoprotein 1, zinc-binding121919656519203094Rat
9303737LOC10369108560S ribosomal protein L34 pseudogene121922764519229018Rat
1560616Zkscan1zinc finger with KRAB and SCAN domains 1121923109219247393Rat
9368177LOC103691088transcription elongation factor B polypeptide 1 pseudogene121925416019254590Rat
1309981Zscan21zinc finger and SCAN domain containing 21121926297719277913Rat
9205257LOC103691091NHP2-like protein 1 pseudogene121928250019283755Rat
6489147Zfp113zinc finger protein 3121928754119298172Rat
1309919Cops6COP9 signalosome subunit 6121930338719306226Rat
1303018Mcm7minichromosome maintenance complex component 7121930661519313877Rat
2325594Mir25microRNA 25121930734019307423Rat
2325459Mir93microRNA 93121930754319307629Rat
2325388Mir106bmicroRNA 106b121930775219307833Rat
1310233Ap4m1adaptor related protein complex 4 subunit mu 1121931422219320339Rat
1311608Taf6TATA-box binding protein associated factor 6121932026919328706Rat
1307636Cnpy4canopy FGF signaling regulator 4121932902719335126Rat
1306932Mblac1metallo-beta-lactamase domain containing 1121933584119337103Rat
11407335LOC108352427uncharacterized LOC108352427121938760919394468Rat
7601016LOC102549704heat shock protein HSP 90-alpha-like121939857619399338Rat
1588255Nxpe5neurexophilin and PC-esterase domain family, member 5121942895019440791Rat
1587058LOC680825hypothetical protein LOC680825121946484119465674Rat
1587046LOC680837hypothetical protein LOC680837121948522019485646Rat
9181261LOC103690351uncharacterized LOC103690351121951078119518561Rat
7675853LOC102551138uncharacterized LOC102551138121951877219542596Rat
1559954Nxpe5l1neurexophilin and PC-esterase domain family, member 5-like 1121951885619530862Rat
1562319RGD1562319similar to family with sequence similarity 55, member C121956140819567858Rat
1309735Lamtor4late endosomal/lysosomal adaptor, MAPK and MTOR activator 4121957390919577625Rat
1305455Trappc14trafficking protein particle complex 14121957789519582185Rat
1561105Gal3st4galactose-3-O-sulfotransferase 4121958311019592444Rat
621363Gpc2glypican 2121959304119599374Rat
621333Stag3stromal antigen 3121959974119630775Rat
7719202LOC102551436uncharacterized LOC102551436121967050919677380Rat
1585866PvrigPVR related immunoglobulin domain containing121967967119681861Rat
11416827LOC108352428uncharacterized LOC108352428121969825519698729Rat
7689536LOC102552106paired immunoglobulin-like type 2 receptor beta-like121970399319708246Rat
1583253LOC685048similar to paired immunoglobin-like type 2 receptor beta121971417819719922Rat
9363350LOC103693631vomeronasal type-2 receptor 116-like121975320719779059Rat
2318233LOC100365854hypothetical LOC100365854121980920819813701Rat
11503226LOC108352429uncharacterized LOC108352429121987453219875006Rat
7726046LOC102547532paired immunoglobulin-like type 2 receptor beta-like121988027019884523Rat
1559588RGD1559588similar to cell surface receptor FDFACT121989054619896468Rat
1562930Vom2r61vomeronasal 2 receptor, 61121993058419939565Rat
1598200Vom2r62vomeronasal 2 receptor, 62121993058519973166Rat
1598199Vom2r-ps104vomeronasal 2 receptor, pseudogene 104121995544719973166Rat
6503018LOC100909556paired immunoglobulin-like type 2 receptor beta-like122005764720061888Rat
1584675Pilrbpaired immunoglobin-like type 2 receptor beta122014040520142844Rat
11394808LOC108352496uncharacterized LOC108352496122014415220157855Rat
9421625LOC103693628uncharacterized LOC103693628122015682520157855Rat
1563400RGD1563400similar to paired immunoglobin-like type 2 receptor beta122018510020208194Rat
1597702LOC685181similar to paired immunoglobin-like type 2 receptor beta122023522120241205Rat
7643065LOC102554407paired immunoglobulin-like type 2 receptor beta-like122024372620246809Rat
7553419LOC102554231paired immunoglobulin-like type 2 receptor alpha-like122024728820248195Rat
1593819LOC685438similar to paired immunoglobin-like type 2 receptor beta122025002020276122Rat
1597726LOC685157similar to paired immunoglobin-like type 2 receptor beta122027089720276883Rat
1560262RGD1560262similar to cell surface receptor FDFACT122028207220300904Rat
1596408LOC685289similar to paired immunoglobin-like type 2 receptor beta122030456320307759Rat
1596422LOC685275similar to paired immunoglobin-like type 2 receptor beta122030736820333021Rat
1626043Vom2r-ps103vomeronasal 2 receptor, pseudogene 103122037245220382259Rat
1626049Vom2r-ps101vomeronasal 2 receptor, pseudogene 101122041969720427134Rat
1625996Vom2r-ps100vomeronasal 2 receptor, pseudogene 100122047416420847911Rat
1585879LOC680910similar to paired immunoglobin-like type 2 receptor beta122048009520486789Rat
6500969LOC100909933paired immunoglobulin-like type 2 receptor beta-like122050787520511413Rat
7626939LOC102554946uncharacterized LOC102554946122053952520544936Rat
1562525RGD1562525similar to cell surface receptor FDFACT122056964220572926Rat
1561730RGD1561730similar to cell surface receptor FDFACT122059292220660658Rat
9071833LOC103693632paired immunoglobulin-like type 2 receptor beta122061345320616909Rat
1560281RGD1560281similar to cell surface receptor FDFACT122066687520675658Rat
9162370LOC103693629paired immunoglobulin-like type 2 receptor beta122068083920689342Rat
6500421LOC100910045paired immunoglobulin-like type 2 receptor beta-like122072626820729217Rat
9451648LOC103693630paired immunoglobulin-like type 2 receptor beta122076036520763902Rat
11425416LOC108352497uncharacterized LOC108352497122079028620793322Rat
1559499RGD1559499similar to cell surface receptor FDFACT122080872520814863Rat
1596749LOC681341similar to paired immunoglobin-like type 2 receptor beta122088206220900765Rat
11429162LOC108352495endogenous retrovirus group K member 113 Gag polyprotein-like122092390820927332Rat
1584665Vom2r64vomeronasal 2 receptor, 64122094393620978110Rat
1564022Vom2r63vomeronasal 2 receptor, 63122100803521077539Rat
1592512LOC686837similar to EC2-V2R pheromone receptor122111051921129995Rat
9337303LOC103690213vomeronasal type-2 receptor 116-like122113836121180302Rat
7604571LOC102546368G-protein coupled receptor family C group 6 member A-like122118282521197201Rat
11466946LOC108352494vomeronasal type-2 receptor 116-like122124227821270561Rat
7657154LOC102546487uncharacterized LOC102546487122129927421301980Rat
11492645LOC108348359paired immunoglobulin-like type 2 receptor beta122133683421373348Rat
1592490LOC686862similar to paired immunoglobin-like type 2 receptor beta122134493721348371Rat
11434352LOC108348155paired immunoglobulin-like type 2 receptor beta-2122135647321362919Rat
7556717LOC102546903paired immunoglobulin-like type 2 receptor beta-2-like122138018421385338Rat
2322358LOC100363794hypothetical LOC100363794122138693221387701Rat
1583278Pilrapaired immunoglobin-like type 2 receptor alpha122141259821418621Rat
1305405Zcwpw1zinc finger CW-type and PWWP domain containing 1122141887421450617Rat
7528453LOC102549330uncharacterized LOC102549330122142743821429181Rat
1598006LOC681266similar to paired immunoglobin-like type 2 receptor beta122145285421459899Rat
1583509LOC681182similar to paired immunoglobin-like type 2 receptor beta122150270121510636Rat
11476410LOC108352481vomeronasal type-2 receptor 116-like122155597121565511Rat
6496729LOC100910801paired immunoglobulin-like type 2 receptor alpha-like122165917521670430Rat
6497409LOC100910669paired immunoglobulin-like type 2 receptor alpha-like122167855021689821Rat
6497217LOC100910636zinc finger CW-type PWWP domain protein 1-like122169007421720186Rat
1560550Mepcemethylphosphate capping enzyme122172124621725965Rat
1584367Ppp1r35protein phosphatase 1, regulatory subunit 35122172748521728678Rat
2324075LOC100362783Uncharacterized protein C7orf61 homolog122174005721746236Rat
9146355LOC103693633uncharacterized LOC103693633122174735221748866Rat
7605479LOC102550456TSC22 domain family protein 4-like122174860821761500Rat
6496186LOC100910838neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1-like122176482921774163Rat
7591909LOC102551683uncharacterized LOC102551683122177762921779102Rat
7541068LOC102551737cell wall protein PRY3-like122178206021784178Rat
68425Cldn3claudin 3122183134121832813Rat
11482657LOC10835248240S ribosomal protein S13 pseudogene122183660921837065Rat
1561143RGD1561143similar to cell surface receptor FDFACT122186614821923271Rat
1566006RGD1566006similar to paired immunoglobin-like type 2 receptor beta122188100821891122Rat
9261510LOC103693637ras-related protein Rap-1b pseudogene122189215421892761Rat
1584946LOC363897similar to Ras-related protein Rap-1b precursor (GTP-binding protein smg p21B)122189404621894945Rat
9110209LOC103693634uncharacterized LOC103693634122191647121919796Rat
6498401LOC100910497paired immunoglobulin-like type 2 receptor alpha-like122193158721950593Rat
1566138RGD1566138similar to Zinc finger, CW type with PWWP domain 1122195084621980699Rat
6497906LOC1009105407SK snRNA methylphosphate capping enzyme-like122198170821986474Rat
6497600LOC100910581protein phosphatase 1 regulatory subunit 35-like122198799321989200Rat
11442159C12H7orf61chromosome 12 open reading frame, human C7orf61122200056622007589Rat
9132159LOC103691282uncharacterized LOC103691282122200770522009220Rat
1584380Tsc22d4TSC22 domain family, member 4122200895622021814Rat
1310964Nyap1neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1122202518622037428Rat
1591278LOC686940similar to enoyl Coenzyme A hydratase domain containing 2122206107822062018Rat
11440916LOC108352431uncharacterized LOC108352431122206412022076726Rat
1306590Agfg2ArfGAP with FG repeats 2122208202822118239Rat
69317Irs3insulin receptor substrate 3122212030522125103Rat
1562406Sap25Sin3A-associated protein 25122212556822126671Rat
1306145Lrch4leucine rich repeats and calponin homology domain containing 4122212738722138436Rat
1305095Fbxo24F-box protein 24122213846022153670Rat
11511026LOC108352432uncharacterized LOC108352432122214564322165080Rat
3270Pcolceprocollagen C-endopeptidase enhancer122215399522160311Rat
1304973Mospd3motile sperm domain containing 3122216497822169251Rat
1310152Tfr2transferrin receptor 2122217738222194330Rat
1307763Actl6bactin-like 6B122219459522211107Rat
7603816LOC102550490uncharacterized LOC102550490122221123222213421Rat
11392984LOC108352483small nuclear ribonucleoprotein Sm D1 pseudogene122221744922225577Rat
69319Gnb2G protein subunit beta 2122222907922234096Rat
1309933Gigyf1GRB10 interacting GYF protein 1122223429622251898Rat
7647582LOC102554880voltage-dependent calcium channel gamma-8 subunit-like122224501022251960Rat
1306413Pop7POP7 homolog, ribonuclease P/MRP subunit122225971322260754Rat
2559Epoerythropoietin122227482822278268Rat
1305044Zanzonadhesin122228537722389008Rat
1583193Ephb4EPH receptor B4122239333822418332Rat
9263674LOC103691283uncharacterized LOC103691283122243407522434824Rat
620747Slc12a9solute carrier family 12, member 9122243484522451265Rat
1583180Trip6thyroid hormone receptor interactor 6122245159622456003Rat
1591241Srrtserrate, RNA effector molecule122245789822471090Rat
7536909Ufsp1UFM1-specific peptidase 1122247114122472357Rat
69313Acheacetylcholinesterase122247235822477052Rat
6485223LOC100912943mucin-3B-like122250165722505712Rat
7510972LOC102551005cell wall protein DAN4-like122250303622503979Rat
3124Muc3mucin 3, intestinal122253566322584775Rat
7673190LOC102557569mucin-12-like122253637422539002Rat
7738182LOC102555154mucin-12-like122254074622569165Rat
3249Serpine1serpin family E member 1122264110422651482Rat
1305911Ap1s1adaptor related protein complex 1 subunit sigma 1122266512822676079Rat
69399VgfVGF nerve growth factor inducible122267730222680630Rat
7594601LOC102551204uncharacterized LOC102551204122268063622685476Rat
11505017LOC108352433uncharacterized LOC108352433122268418622698570Rat
1592588Mogat3monoacylglycerol O-acyltransferase 3122270862222710787Rat
631339Plod3procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3122271642122726982Rat
4888576Mir702microRNA 702122272184622721952Rat
2322870Znhit1zinc finger, HIT-type containing 1122272664322732917Rat
1310678Cldn15claudin 15122273819822750392Rat
1306668Fis1fission, mitochondrial 1122275048522765324Rat
6496734LOC100910802uncharacterized LOC100910802122278423322799362Rat
1305370Ift22intraflagellar transport 22122280438422811036Rat
1591401Col26a1collagen type XXVI alpha 1 chain122283486622980603Rat
1561258Myl10myosin light chain 10122301181723075558Rat
620618Cux1cut-like homeobox 1122315088623470095Rat
69284Sh2b2SH2B adaptor protein 2122347147723501043Rat
1595708Prkrip1PRKR interacting protein 1122351498723533278Rat
1310213Orai2ORAI calcium release-activated calcium modulator 2122354448323564602Rat
1308608Alkbh4alkB homolog 4, lysine demethylase122356820423574133Rat
1359442Lrwd1leucine-rich repeats and WD repeat domain containing 1122357423423587262Rat
1310198Polr2jRNA polymerase II subunit J122358722223592774Rat
1565457Rasa4RAS p21 protein activator 4122359698923624386Rat
1598237Upk3bl1uroplakin 3B like 1122365499623661009Rat
1309615Upk3buroplakin 3B122367616923682395Rat
1561790Dtx2deltex E3 ubiquitin ligase 2122368795823727594Rat
620606Zp3zona pellucida glycoprotein 3122373522523752734Rat
1306970Ssc4dscavenger receptor cysteine rich family member with 4 domains122375282323769466Rat
11459746LOC108352434uncharacterized LOC108352434122375526823757561Rat
62002Ywhagtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma122378954723817884Rat
61306Hspb1heat shock protein family B (small) member 1122383939023841051Rat
1587868Srrm3serine/arginine repetitive matrix 3122385540023925793Rat
11499585LOC108352435uncharacterized LOC108352435122392834923938612Rat
619719Mdh2malate dehydrogenase 2122394145123954406Rat
1305845Styxl1serine/threonine/tyrosine interacting-like 1122395456323987155Rat
1311474Tmem120atransmembrane protein 120A122398959623998257Rat
68335Porcytochrome p450 oxidoreductase122399841124017063Rat
1308231Rhbdd2rhomboid domain containing 2122409113224102081Rat
1310245Ccl24C-C motif chemokine ligand 24122413152924152626Rat
1587817Ccl26C-C motif chemokine ligand 26122415718224161870Rat
11442335LOC108352436uncharacterized LOC108352436122416284124166326Rat
1583828LOC363903similar to ribosomal protein S13122417284024173294Rat
620305Hip1huntingtin interacting protein 1122418079524315373Rat
7563147LOC102548966uncharacterized LOC102548966122431406624316679Rat
620680Pom121POM121 transmembrane nucleoporin122431657524341943Rat
9465680LOC103691295uncharacterized LOC103691295122431658324319209Rat
1309268Nsun5NOP2/Sun RNA methyltransferase 5122434194024346900Rat
631346Trim50tripartite motif-containing 50122434842624365467Rat
1308926Fkbp6FKBP prolyl isomerase family member 6122436594124438088Rat
628817Fzd9frizzled class receptor 9122447398124476295Rat
1597089Baz1bbromodomain adjacent to zinc finger domain, 1B122447888224536851Rat
1597090Bcl7bBAF chromatin remodeling complex subunit BCL7B122454374824557093Rat
1595038Tbl2transducin (beta)-like 2122456584324578855Rat
620400MlxiplMLX interacting protein-like122459064524619639Rat
1587769Vps37dVPS37D subunit of ESCRT-I122465134224656793Rat
1595783Dnajc30DnaJ heat shock protein family (Hsp40) member C30122466839824669464Rat
1589742Bud23BUD23, rRNA methyltransferase and ribosome maturation factor122466962624680833Rat
69430Stx1asyntaxin 1A122468205024710002Rat
1585479Abhd11-as1ABHD11 antisense RNA 1 (tail to tail)122472119024722177Rat
1304681Abhd11abhydrolase domain containing 11122472227724725760Rat
1585449LOC686150similar to actin related protein 2/3 complex, subunit 5122474411724745066Rat
1307932Cldn4claudin 4122476121024763008Rat
1588881Mettl27methyltransferase like 27122476735124775891Rat
9242288LOC103691506claudin-4-like122478563724786293Rat
1561903Tmem270transmembrane protein 270122480320424808287Rat
7520086LOC102553484uncharacterized LOC102553484122497367924980976Rat
67394Elnelastin122497847825021864Rat
62055Limk1LIM domain kinase 1122503663025070538Rat
11405154LOC10835248440S ribosomal protein S14 pseudogene122507854125079054Rat
1359222Eif4heukaryotic translation initiation factor 4H122509311925109805Rat
631397Lat2linker for activation of T cells family, member 2122511409925128381Rat
621198Rfc2replication factor C subunit 2122513037525143480Rat
7689818LOC102553558uncharacterized LOC102553558122514838125150352Rat
1583827LOC363906hypothetical LOC363906122515673725157396Rat
1563240Ervfrd-1endogenous retrovirus group FRD member 1, envelope122516113025168182Rat
62019Clip2CAP-GLY domain containing linker protein 2122517295725236935Rat
620856Gtf2ird1GTF2I repeat domain containing 1122526405225370947Rat
11424350LOC108352437uncharacterized LOC108352437122537249725375302Rat
9271754LOC103693636uncharacterized LOC103693636122537249725377457Rat
727961Gtf2igeneral transcription factor II I122541080425487970Rat
9311981LOC103691302uncharacterized LOC103691302122548792125499152Rat
61307Ncf1neutrophil cytosolic factor 1122549710425506300Rat
1307435Gtf2ird2GTF2I repeat domain containing 2122550905925555554Rat
1307558Rcc1lRCC1 like122556187125592337Rat
1304672Castor2cytosolic arginine sensor for mTORC1 subunit 2122559580025638806Rat
7587101LOC102553721uncharacterized LOC102553721122564866225654744Rat
6488308LOC10091219440S ribosomal protein SA-like122581538325821742Rat
7586081LOC10255561040S ribosomal protein S2-like122620936826214894Rat
7572143LOC102553887uncharacterized LOC102553887122633794826351461Rat
11435442LOC108352438uncharacterized LOC108352438122673944526827888Rat
7489014Mir6322microRNA 6322122682506026825178Rat
1583826LOC363907similar to Purine nucleoside phosphorylase (Inosine phosphorylase) (PNP)122694367226947876Rat
7549056LOC102554260uncharacterized LOC102554260122709171827100401Rat
2323959Auts2activator of transcription and developmental regulator AUTS2122715536228252752Rat
9170642LOC103691310autism susceptibility gene 2 protein-like122715536427647641Rat
9402189LOC103691309uncharacterized LOC103691309122742162227424633Rat
11500192LOC108352498uncharacterized LOC108352498122766025627667957Rat
9310086LOC103693638gametogenetin-like122815519628160152Rat
1563452Galnt17polypeptide N-acetylgalactosaminyltransferase 17122838187929268457Rat
7559672LOC102554701zinc finger protein AEBP2-like122846925328477633Rat
9271205LOC103691316uncharacterized LOC103691316122884306328844825Rat
6487394LOC100912379neutrophil cytosol factor 1-like122897652828978633Rat
6488068LOC100912262general transcription factor II-I repeat domain-containing protein 1-like122901222929080026Rat
9339716LOC103690026S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like122918736829231035Rat
7684404LOC102550645uncharacterized LOC102550645122928902029294566Rat
1305843Caln1calneuron 1122930711729796996Rat
9451108LOC103691320uncharacterized LOC103691320122938338729384947Rat
11482332LOC10835243940S ribosomal protein S15a pseudogene122962714929627592Rat
1310420Tyw1tRNA-yW synthesizing protein 1 homolog122982499029919240Rat
9443604LOC103691321interferon-induced transmembrane protein 1 pseudogene122989628029898079Rat
1311043SbdsSBDS, ribosome maturation factor122992144329930602Rat
1303319Tmem248transmembrane protein 248122993172829958050Rat
1307295Rabgef1RAB guanine nucleotide exchange factor 1122996013230004727Rat
1582914Kctd7potassium channel tetramerization domain containing 7123002408030033357Rat
1308473Tpst1tyrosylprotein sulfotransferase 1123004575330112377Rat
620753CrcpCGRP receptor component123012523730160857Rat
9192914LOC103691322uncharacterized LOC103691322123013684030139887Rat
619974Aslargininosuccinate lyase123016092230178348Rat
1598198LOC501835similar to 40S ribosomal protein S9123019322130194563Rat
2772Gusbglucuronidase, beta123020206630215583Rat
1303249Vkorc1l1vitamin K epoxide reductase complex, subunit 1-like 1123021882530268990Rat
1560258Nupr2nuclear protein 2, transcriptional regulator123030093630304041Rat
1559988Zbed5zinc finger, BED-type containing 5123030846930314520Rat
11371096LOC108352485MLV-related proviral Env polyprotein-like123032210530324506Rat
11438813LOC108352486heterogeneous nuclear ribonucleoprotein Q-like123032485730338434Rat
9474710LOC103693639heterogeneous nuclear ribonucleoprotein Q pseudogene123033430130335350Rat
1311541Mmp17matrix metallopeptidase 17123035387430356526Rat
9342443LOC103693640MLV-related proviral Env polyprotein-like123042533230427226Rat
6496638LOC100910788coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial-like123044334330446075Rat
3325Phkg1phosphorylase kinase catalytic subunit gamma 1123045043130464314Rat
1563253Sumf2sulfatase modifying factor 2123046502530490683Rat
1304763Cct6achaperonin containing TCP1 subunit 6A123049158430501813Rat
1308764Psphphosphoserine phosphatase123051412830526551Rat
1566421Nipsnap2nipsnap homolog 2123052754030566090Rat
1307650Mrps17mitochondrial ribosomal protein S17123057038630573670Rat
1596186Septin14septin 14123060016230623173Rat
9221590LOC103691323heterogeneous nuclear ribonucleoprotein Q pseudogene123062420930626524Rat
11384356LOC108352487heterogeneous nuclear ribonucleoprotein Q pseudogene123062545430648708Rat
9235993LOC103691507zinc finger protein 471-like123062629730641417Rat
7720926LOC102550116zinc finger protein with KRAB and SCAN domains 7-like123064142430647457Rat
11492414LOC10835244040S ribosomal protein S25 pseudogene123064966830650107Rat
2324824Zfp11zinc finger protein 11123065524530668370Rat
1311541Mmp17matrix metallopeptidase 17123070190030728683Rat
1305004Sfswapsplicing factor SWAP123074056330811015Rat
7689144LOC102555340uncharacterized LOC102555340123094591230954007Rat
1594795Adgrd1adhesion G protein-coupled receptor D1123113480631249594Rat
1594781LOC689271similar to ATP synthase, H+ transporting, mitochondrial Fo complex, subunit f, isoform 2123125812931258546Rat
620367RanRAN, member RAS oncogene family123131955631324105Rat
2558Stx2syntaxin 2123132420331360249Rat
708533Rimbp2RIMS binding protein 2123139322931605567Rat
1306980Piwil1piwi-like RNA-mediated gene silencing 1123160864131629961Rat
11518793LOC108352441uncharacterized LOC108352441123163007331633904Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10888D12Wox1092122394156323941651Ratregion
11051D12Mit2217122265070222650918Ratregion
11052D12Wox11196122265071822650917Ratregion
11053D12Wox12198122265072122650922Ratregion
33911D12Mit6139121441977514419913Ratregion
33961D12Mit5180121441977514419907Ratregion
34017D12Mit9142122485890924859050Ratregion
34246D12Mgh3118122728547327285590Ratregion
34417D12Mgh2163122287629722876459Ratregion
34729D12Mgh5132123172356531723688Ratregion
11449D12Wox14158122501336425013521Ratregion
11450D12Mgh12140122500652225006661Ratregion
11451D12Mgh13145122501334725013485Ratregion
33725D12Mit1259121711452117114770Ratregion
36025D12Rat23154122719009627190240Ratregion
36221D12Rat4292121445449414454777Ratregion
36344D12Mit10121122667079726670921Ratregion
37250D12Rat26201122571144825711626Ratregion
37272D12Rat28120121789565417895779Ratregion
37318D12Rat29150121962651519626681Ratregion
37346D12Rat27205122786940927869615Ratregion
37478D12Rat43243121312721113127463Ratregion
35479D12Rat8158122579911925799259Ratregion
35501D12Rat2167121176499511765163Ratregion
36805D12Rat13170122788282827882997Ratregion
37878D12Rat33221122419370724193945Ratregion
36538D12Rat7161122299072622990886Ratregion
36755D12Rat11165122801414728014311Ratregion
34801D12Rat3148121387169213871843Ratregion
35701D13Rat10148121939690019397041Ratregion
35889D12Rat10155122670997426710128Ratregion
35923D12Rat12152122791119627911339Ratregion
39626D12Rat75215122999808229998298Ratregion
39886D12Rat65202121349789913498095Ratregion
38052D12Rat37165121235531812355490Ratregion
38094D12Rat47209121715998917160198Ratregion
40408D12Rat91160121796086517961014Ratregion
40702D12Rat69211122299247922992678Ratregion
38404D12Rat45248122821709828217343Ratregion
40214D12Rat83158123013793630138078Ratregion
39026D12Rat34223121312085913121071Ratregion
39218D12Rat35200122593822725938420Ratregion
39236D12Rat51213122432070824320928Ratregion
39330D12Rat39215121497910614979338Ratregion
39446D12Rat99231122895930628959532Ratregion
41960D12Arb2170121025689010257059Ratregion
41965D12Arb890121448334014483459Ratregion
41384D12Rat70154122268222822682373Ratregion
41414D12Rat63166121198690511987076Ratregion
41440D12Rat74137122798203027982170Ratregion
42965D12Rat92248122382535523825588Ratregion
42969D12Rat115215122714130827141504Ratregion
40838D12Rat62217121185504811855254Ratregion
40942D12Rat60178121201373412013907Ratregion
40986D12Rat72309122497553324975841Ratregion
41054D12Rat61178121220839612208571Ratregion
44933D12Got12258121084327310843530Ratregion
44935D12Got101204121129566311295866Ratregion
44937D12Got13295121237879012379083Ratregion
44939D12Got14194121233663412336825Ratregion
44940D12Got15270121284648912846755Ratregion
44941D12Got21274121300452913004804Ratregion
44942D12Got18173121206334912063520Ratregion
44944D12Got17131121303084713030977Ratregion
44947D12Got25127121423843714238560Ratregion
44948D12Got20234121295214712952380Ratregion
44949D12Got24145121428757014287714Ratregion
44950D12Wox5116121571460915714743Ratregion
44951D12Got26220121488847314888692Ratregion
44952D12Got27156121551581015515965Ratregion
44954D12Got29279121601193516012213Ratregion
44956D12Got30158121655309716553251Ratregion
44958D12Got31134121934201619342146Ratregion
44959D12Got34207121916758719167793Ratregion
44960D12Got35142121943004819430193Ratregion
44962D12Got36139121865463218654766Ratregion
44963D12Got32176121943007119430247Ratregion
44965D12Got40230122291024122910470Ratregion
44966D12Got42161122285285722853017Ratregion
44967D12Got41157122285221322852369Ratregion
44968D12Got39155122262885122629005Ratregion
44969D12Got102135122416750124167635Ratregion
44970D12Got45149122496180224961950Ratregion
44971D12Got46216122901414729014362Ratregion
44971D12Got46216122530711825307333Ratregion
44973D12Got103249122392175123922001Ratregion
44974D12Got48180122591507825915257Ratregion
44975D12Got49185122607906626079250Ratregion
44976D12Got47111122646257126462681Ratregion
44977D12Got50298122652067126520968Ratregion
44978D12Got51205122663166326631867Ratregion
44979D12Got55222122691536826915589Ratregion
44980D12Got58145122887684528876989Ratregion
44981D12Got67241122955132329551563Ratregion
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5070191RH94525173121920247419202646Ratregion
5069036AU046764158122990765029907807Ratregion
5070281RH94577178122265105522651232Ratregion
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5069284AU046599190122509174325091927Ratregion
5061906BI294189190122999363729993826Ratregion
5065320BE121431161121928394019284100Ratregion
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5062302BI288626185122514874225148926Ratregion
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5063790AW535181183122532165725321839Ratregion
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5062218BF397585213121917709819177310Ratregion
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5066092BI298983160121123320011233359Ratregion
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5061170BE099159165122280450522804669Ratregion
5064588BF399394153122261019122610343Ratregion
5066228PMC122623P1122121371861913718740Ratregion
5066246PMC125678P1549121371728013717828Ratregion
5066268PMC133768P1159121371793713718095Ratregion
5063112BE113733168122228727122287438Ratregion
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5066290PMC138011P1646121371809213718737Ratregion
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5086377BQ205524202122639442026394621Ratregion
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5090515AU049797289122669352726693815Ratregion
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5081457Fzd9269122447551524475783Ratregion
5081461UniSTS:230793351122506898225069332Ratregion
5090261AU049646126121740337717403502Ratregion
5088139Uncx4.198121718217117182268Ratregion
5088143Baz1b121122453671224536832Ratregion
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5082331BI274506161122498919824989358Ratregion
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5090417AU049738129122837937628379504Ratregion
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5080736RH141752202121271449512714696Ratregion
5080796RH141786207121328932413289530Ratregion
5081016RH141916184121697470816974891Ratregion
5081258RH142057192122356839423568585Ratregion
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5086572BE114476157122811644328116599Ratregion
5086610AA850383191121418027814180468Ratregion
5081388AI454263194121740295417403147Ratregion
5081459UniSTS:230791255122447552924475783Ratregion
5081633BE117712186121488331514883500Ratregion
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5502619RH125677163121127271211272874Ratregion
5502918Prkar1b751121771272817713478Ratregion
5503196mActb0121371875613719194Ratregion
5503072Sbds161122992150829922592Ratregion
5502989D5Dcr13141122489137424891514Ratregion
5503867SSC3D06197122381760423817800Ratregion
5507648Eln698122499615724996854Ratregion
5503613Cldn3660122183171421832373Ratregion
5503986UniSTS:2571050121692635716927324Ratregion
5504448PMC209527P1500121371709113718056Ratregion
5504464PMC212730P175121371845813718656Ratregion
5504504PMC24644P4243121371696213717291Ratregion
5504658PMC33181P2315121371831413718752Ratregion
5504662PMC33279P1460121371711813718043Ratregion
5504670PMC350549P3154121371720413717823Ratregion
5504742PMC86565P2601122212315922123759Ratregion
5504314D12S1240E100122189472021894819Ratregion
5504562PMC30411P1321121371689113717298Ratregion
5504682PMC356969P12330121371720313717998Ratregion
5504758PMC87052P1433121371811113718757Ratregion
5504772PMC97445P1440121371686413717856Ratregion
5504819ha2178866122743937427440239Ratregion
5505327Papolb321121411293114113251Ratregion
5683878D12Hmgc3194121508558515085778Ratregion
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5683882D12Hmgc5193122105925421059443Ratregion
5683882D12Hmgc5193122101744021017632Ratregion
5683884D12Hmgc6122228327122283507Ratregion
5683884D12Hmgc6122228306222283507Ratregion
5505961Gnb2390122223306022233536Ratregion
5505360Ache1290122247516422476453Ratregion
5505466UniSTS:530587421121696321316963633Ratregion
5505919Mmp1795123071773230717826Ratregion
5506041UniSTS:498230476121311271613113191Ratregion
5506193UniSTS:498764430123162416631624595Ratregion
5506270GDB:458569784122359004723590130Ratregion
5506797G45501143121207837712078519Ratregion
5507245BB01335087121060223210602318Ratregion
5507263aa6586760121371867913718965Ratregion
5507319G48114154122507031325070466Ratregion
5499595Wbscr1215122510744925108107Ratregion
5500240AI747533103121930711419307950Ratregion
5499597Wbscr14147122459122324592282Ratregion
5499615MARC_2660-2661:991933047:1307122189409621894391Ratregion
5499663MARC_6945-6946:992007577:2582122399688323997464Ratregion
5500967PMC102052P1360121371817413718747Ratregion
5500977PMC107891P1514121371707313718052Ratregion
5501001PMC115141P1318121371777913718096Ratregion
5501011PMC117352P1160121371706813717227Ratregion
5501013PMC117780P1465121371789513718449Ratregion
5501091PMC133998P8537121371713513718137Ratregion
5501387Mafk588121692401816924605Ratregion
5499901UniSTS:235351167121620014416200310Ratregion
5499903UniSTS:235362203121180571611805918Ratregion
5499903UniSTS:235362203121112897311129175Ratregion
5499895UniSTS:235349192121748869117488882Ratregion
5499899UniSTS:235344206122267571922675924Ratregion
5499905UniSTS:235357128121331350713313634Ratregion
5502357RH124577138121274805412748191Ratregion
5503095ASL204123017638030176843Ratregion
5500713RH911941560122424164624243205Ratregion
5500535RH135895139121234119412341332Ratregion
5501017PMC122924P2439121371686413717855Ratregion
5500551RH135954170121681415216814321Ratregion
5503556UniSTS:463940304122247531722475620Ratregion
5500875D5S5031483122442905024430532Ratregion
5501175PMC15197P30122264939822649903Ratregion
5501273PMC187403P1220121371785313718072Ratregion
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5504688PMC37512P3250121371780313718052Ratregion
5504730PMC86032P2444121371714613718055Ratregion
5504780PMC99880P2318121371778213718099Ratregion
5504789UniSTS:2741821383121692595716927339Ratregion
5505116LOC783396150121790325117903400Ratregion
5501693LOC345651130121371720213717797Ratregion
5501724UniSTS:266994207122239377922393985Ratregion
5502066MARC_26575-26576:1033748265:10122216573022166324Ratregion
5502126MARC_5081-5082:996690120:1683122219685922197541Ratregion
5502295RH124308146121058166510581810Ratregion
5502686Tmem184a0121691866516919327Ratregion
5502307RH124339154121925433719254490Ratregion
5502609RH12552482122694600026946081Ratregion
5502898Lmtk21032121241012312411154Ratregion
5502475RH125009259122692511426925372Ratregion
11529999rs197969186122392065623920656Ratregion
11529998rs196994347122407860824078608Ratregion
11530000rs197046678122439438324394383Ratregion
Position Markers

Flank 1: (D12Arb2)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01210,256,890 - 10,257,059NCBI
Rnor_5.01212,361,595 - 12,361,764UniSTS
Celera1210,340,887 - 10,341,056UniSTS
Cytogenetic Map12p11UniSTS
RH 3.4 Map12110.7RGD
RH 3.4 Map12110.7UniSTS
RH 2.0 Map1288.7RGD
SHRSP x BN Map1211.64RGD
Peak: (D12Arb2)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01210,256,890 - 10,257,059NCBI
Rnor_5.01212,361,595 - 12,361,764UniSTS
Celera1210,340,887 - 10,341,056UniSTS
Cytogenetic Map12p11UniSTS
RH 3.4 Map12110.7RGD
RH 3.4 Map12110.7UniSTS
RH 2.0 Map1288.7RGD
SHRSP x BN Map1211.64RGD
Flank 2: (D12Arb5)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01231,723,528 - 31,723,732NCBI
Rnor_5.01233,647,362 - 33,647,566UniSTS
RGSC_v3.41229,130,143 - 29,130,348RGD
RGSC_v3.41229,130,144 - 29,130,348UniSTS
RGSC_v3.11228,993,531 - 28,993,736RGD
Celera1229,756,840 - 29,757,037UniSTS
Cytogenetic Map12 RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300174Bw15Body weight QTL 152.93body mass (VT:0001259)body weight loss (CMO:0001399)12111765163Rat
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12122650917Rat
10450854Stl34Serum triglyceride level QTL 343.50.05blood LDL triglyceride amount (VT:0010699)blood lipoprotein triglyceride level (CMO:0002685)12122853017Rat
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12123035872Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123758197Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12130749723Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12136919844Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12138334225Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)1215081045150810Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1215081045150810Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)1215081045150810Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)1215081045150810Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)1215081045150810Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)1215081045150810Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)1215081045150810Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)1249257845492578Rat
7243862Mcs30Mammary carcinoma susceptibility QTL 308.62mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)12125813910257059Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12247568747475687Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12251344247513442Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12251344247513442Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12421005149210051Rat
724526Uae3Urinary albumin excretion QTL 34.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)12540609412355490Rat
1600391Edcs2Endometrial carcinoma susceptibility QTL23.50.01uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)12824960820590080Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12895459327911196Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6922362652716770Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12922362652716770Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12922362652716770Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12922362652716770Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12922362652716770Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12922362652716770Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12922363052716770Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12978983452716770Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121017588931975590Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)121025689031723732Rat
1331739Hrtrt14Heart rate QTL 143.56232heart pumping trait (VT:2000009)heart rate (CMO:0000002)121176499514489679Rat
1300157Rf21Renal function QTL 214.4renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)121176499537522089Rat
1331786Kidm11Kidney mass QTL 113.571kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)121312721127285590Rat
1331755Bp219Blood pressure QTL 2193.041arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121312721131723688Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121312721150320041Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121441977552716770Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)121502198652716770Rat
7204484Bp358Blood pressure QTL 3580.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121508558522283507Rat
61416Pia4Pristane induced arthritis QTL 48.4joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)121571460935964508Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121571460941291738Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121590890052716770Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121590890052716770Rat
61443Btemp2Thermal response to stress QTL 23.30.000094body temperature trait (VT:0005535)core body temperature (CMO:0001036)121711477023839390Rat
631543Bp83Blood pressure QTL 835.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121718558044098244Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)121796086538409001Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121834247752716770Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121834247752716770Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121872904352716770Rat
1549902Bp269Blood pressure QTL 269arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121875259352716770Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101875259352716770Rat
2306789Ean6Experimental allergic neuritis QTL 64.9nervous system integrity trait (VT:0010566)experimental autoimmune neuritis severity score (CMO:0001528)122265070227190240Rat
737822Alc10Alcohol consumption QTL 102.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)122265070245946937Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)122265070248598906Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)122265070252716770Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)122265072141291738Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)122287629743799153Rat
631521Pia12Pristane induced arthritis QTL 128.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)122324124626710128Rat
11530002Bss119Bone structure and strength QTL 11916.390.00000000000000004lumbar vertebra area (VT:0010570)lumbar vertebra area (CMO:0001688)122392065624394383Rat
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)122490659052716770Rat
7411643Foco20Food consumption QTL 200.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)122609884552716770Rat
70169Eae13Experimental allergic encephalomyelitis QTL 130.032nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)122719024042196641Rat
1331763Wbc2White blood cell count QTL 23.162leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)122728547336161779Rat
8693658Alc33Alcohol consumption QTL 332.10.68drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)122911360949560679Rat
8693635Alc28Alcohol consumption QTL 282.70.439drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)122911360950757185Rat
1556747Calcic1Intracellular calcium level QTL 13.6platelet calcium amount (VT:0010500)platelet intracellular calcium level (CMO:0000922)123172356547433663Rat
1300175Cm5Cardiac mass QTL 53.78heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)123172356551955754Rat
1600386Calcic2Intracellular calcium level QTL 20.001platelet physiology trait (VT:0005464)platelet intracellular calcium level (CMO:0000922)123172356552716770Rat
1331787Rf41Renal function QTL 412.998kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)123172368845946802Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Eau2

RGD Curation Notes
Note Type Note Reference
qtl_general microarray analysis, z-score analysis, major fluctuation in the expression, known functional role in Eau susceptibility suggested 42 genes, 26 of which were validated 2293749