Cm5 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Cm5 (Cardiac mass QTL 5) Rattus norvegicus

Symbol: Cm5
Name: Cardiac mass QTL 5
RGD ID: 1300175
Previously known as: Specialized Center of Research QTL 120; SCOR120
Trait: heart mass   (VT:0007028)    
Measurement Type: heart left ventricle weight to body weight ratio   (CMO:0000530)    
LOD Score: 3.78
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21228,064,433 - 45,899,022RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01231,723,565 - 51,955,754RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01233,647,399 - 53,694,105RGDRnor5.0
RGSC_v3.41229,130,180 - 46,043,557RGDRGSC3.4
RGSC_v3.11228,993,569 - 45,907,684RGD
Cross Type: Not Available
Strains Crossed: BN/SsNHsd SS/JrHsdMcwi 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
Cardiomegaly  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait
heart mass  (IDA)

Rat Strain
BN/SsNHsd  (IEA)
SS/JrHsdMcwi  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genomic map of cardiovascular phenotypes of hypertension in female Dahl S rats. Moreno C, etal., Physiol Genomics 2003 Nov 11;15(3):243-57. Epub 2003 Oct 07.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1583825Fzd10frizzled class receptor 10122809837128101566Rat
11406627Rps20-ps3ribosomal protein S20, pseudogene 3122814558828146353Rat
41145714LOC120095942uncharacterized LOC120095942122824438928263727Rat
735062Tmem132dtransmembrane protein 132D122827003928917324Rat
40950631LOC120095943uncharacterized LOC120095943122830924128329042Rat
1304896Glt1d1glycosyltransferase 1 domain containing 1122897598429049707Rat
708469Slc15a4solute carrier family 15 member 4122904863429082480Rat
1583824Tmem132ctransmembrane protein 132C122911521329437900Rat
11472079LOC108352443uncharacterized LOC108352443122914059329146192Rat
41181629Tmem254-ps1transmembrane protein 254, pseudogene 1122939753429414987Rat
41348602LOC120095946uncharacterized LOC120095946122946757229469165Rat
41154964LOC120096083U2 spliceosomal RNA122946950029469687Rat
1559821Myl6l2myosin light chain 6 like 2122948809129488746Rat
41083776LOC120095947uncharacterized LOC120095947122950898329528608Rat
9386528Rpl7-ps7ribosomal protein L7, pseudogene 7122955463029556108Rat
9188281LOC103691337uncharacterized LOC103691337122964621429652464Rat
41351787LOC120095949uncharacterized LOC120095949122973060929736279Rat
41235196LOC120095951uncharacterized LOC120095951122986393629869460Rat
41366922LOC120095952uncharacterized LOC120095952122988752429899402Rat
11363226LOC108352445uncharacterized LOC108352445122995068830009315Rat
2324513Mrpl23-ps1mitochondrial ribosomal protein L23, pseudogene 1123012462230125050Rat
7668786LOC102549552uncharacterized LOC102549552123014630830148665Rat
41213846LOC120095956uncharacterized LOC120095956123014922730154629Rat
11405284LOC108352488uncharacterized LOC108352488123018629430194578Rat
1592278Frg1-ps1FSHD region gene 1, pseudogene 1123026902130269933Rat
11493793LOC108352502uncharacterized LOC108352502123038801030409963Rat
40974416LOC120095960uncharacterized LOC120095960123068444330713892Rat
1566191Tmem132btransmembrane protein 132B123082983131093841Rat
41202940LOC120095961uncharacterized LOC120095961123099435430996878Rat
708522Aacsacetoacetyl-CoA synthetase123111309831156411Rat
1561711Bri3bpBri3 binding protein123117674231188563Rat
1306837Dhx37DEAH-box helicase 37123119478231214890Rat
11517466Trnaa-ugc3transfer RNA alanine (anticodon UGC) 3123122046331220534Rat
11440418Trnad-guc4transfer RNA aspartic acid (anticodon GUC) 4123122106331221134Rat
11367381Trnaf-gaa4transfer RNA phenylalanine (anticodon GAA) 4123122392631223998Rat
11425977Trnad-guc5transfer RNA aspartic acid (anticodon GUC) 5123122438131224452Rat
11373727Trnaa-ugc4transfer RNA alanine (anticodon UGC) 4123122569831225769Rat
621244Ubcubiquitin C123123914931243924Rat
2302Scarb1scavenger receptor class B, member 1123129614331362649Rat
41213561LOC120095963uncharacterized LOC120095963123136729531370732Rat
1310293Ncor2nuclear receptor co-repressor 2123146641831628319Rat
41017092LOC120095965uncharacterized LOC120095965123152405131528132Rat
1588777Rflnarefilin A123163336031642313Rat
7677226Zfp664zinc finger protein 664123176779231796038Rat
1561886Rpl27l5ribosomal protein L27 like 5123177986031780438Rat
1601131Ccdc92coiled-coil domain containing 92123179610231823333Rat
619988Dnah10dynein, axonemal, heavy chain 10123182345131946857Rat
9133337LOC103691347eukaryotic translation initiation factor 1 pseudogene123191454131914883Rat
41097782LOC120095966uncharacterized LOC120095966123194682131962475Rat
621006Atp6v0a2ATPase H+ transporting V0 subunit a2123194722031979875Rat
1591895Tctn2tectonic family member 2123198244032007242Rat
41257986Trnaa-agc44transfer RNA alanine (anticodon AGC) 44123199897931999059Rat
40970512Timm23-ps1translocase of inner mitochondrial membrane 23, pseudogene 1123200749732008787Rat
1305494Gtf2h3general transcription factor IIH subunit 3123200901032025484Rat
620819Eif2b1eukaryotic translation initiation factor 2B subunit alpha123202559332033848Rat
2324094Ddx55DEAD-box helicase 55123203446232050218Rat
69243Tmed2transmembrane p24 trafficking protein 2123205254232061628Rat
1307973Rilpl1Rab interacting lysosomal protein-like 1123207187032109687Rat
1310724Snrnp35small nuclear ribonucleoprotein U11/U12 subunit 35123211203232119829Rat
1303140Rilpl2Rab interacting lysosomal protein-like 2123212590832137426Rat
1587560Kmt5alysine methyltransferase 5A123213935332167777Rat
1310005Sbno1strawberry notch homolog 1123217517632234200Rat
1308664Cdk2ap1cyclin-dependent kinase 2 associated protein 1123224975232258483Rat
1563482Mtrfrmitochondrial translation release factor in rescue123226156932275258Rat
1598368Mphosph9M-phase phosphoprotein 9123227544932346097Rat
1310867Pitpnm2phosphatidylinositol transfer protein, membrane-associated 2123234745532479103Rat
1307657Arl6ip4ARF like GTPase 6 interacting protein 4123247962332481768Rat
1310594Ogfod22-oxoglutarate and iron-dependent oxygenase domain containing 2123248238632485688Rat
41316137LOC120096094U6 spliceosomal RNA123249059432490697Rat
620254Abcb9ATP binding cassette subfamily B member 9123249921332531932Rat
7543130LOC102552690uncharacterized LOC102552690123253546632560005Rat
1304576Vps37bVPS37B subunit of ESCRT-I123256004732589015Rat
621615Hip1rhuntingtin interacting protein 1 related123259016432618841Rat
1586391Ccdc62coiled-coil domain containing 62123262317032659912Rat
1584200Denrdensity regulated reinitiation and release factor123266251232685283Rat
1586364Hcar1hydroxycarboxylic acid receptor 1123271068032713934Rat
727952Hcar2hydroxycarboxylic acid receptor 2123272625232728238Rat
1307905Kntc1kinetochore associated 1123276902032839617Rat
1564882Rsrc2arginine and serine rich coiled-coil 2123283984032859820Rat
1309774Zcchc8zinc finger CCHC-type containing 8123286917032892707Rat
2323644LOC100359550protein S100-A11-like123290539632905803Rat
67404Clip1CAP-GLY domain containing linker protein 1123291093233017891Rat
41062965LOC120095846uncharacterized LOC120095846123296019532960798Rat
620643Vps33aVPS33A core subunit of CORVET and HOPS complexes123302459633051399Rat
1310885Diablodiablo, IAP-binding mitochondrial protein123305578433070401Rat
1309612B3gnt4UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4123307022133073904Rat
1561461Lrrc43leucine rich repeat containing 43123307414933092257Rat
1585183Il31interleukin 31123309510833105026Rat
1560774MlxipMLX interacting protein123312852433192300Rat
40933635LOC120096088U4 spliceosomal RNA123318341633183497Rat
1585128Bcl7aBAF chromatin remodeling complex subunit BCL7A123321197833243903Rat
41176598LOC120095967uncharacterized LOC120095967123324397233272229Rat
1564948Cfap251cilia and flagella associated protein 251123326162233337028Rat
41115357LOC120095968uncharacterized LOC120095968123332778933331332Rat
621110Psmd9proteasome 26S subunit, non-ATPase 9123333718233357468Rat
7586771LOC102547495uncharacterized LOC102547495123337397433381533Rat
61974Hpd4-hydroxyphenylpyruvate dioxygenase123338139733392750Rat
2323325Setd1bSET domain containing 1B, histone lysine methyltransferase123339596333421671Rat
1584038Rhofras homolog family member F, filopodia associated123342237533446689Rat
1584031Tmem120btransmembrane protein 120B123344744133487257Rat
1583094Rpl32-ps9ribosomal protein L32, pseudogene 9123349625333497041Rat
1583091Morn3MORN repeat containing 3123350565433529918Rat
1311873Orai1ORAI calcium release-activated calcium modulator 1123353315133548361Rat
7710500LOC102546488uncharacterized LOC102546488123354839733557605Rat
7734862Lraplocus regulating alcohol preference123356248233574339Rat
1310217Kdm2blysine demethylase 2B123356653033701366Rat
628636Rnf34ring finger protein 34123370365533724606Rat
40965160LOC120095970uncharacterized LOC120095970123372632133734720Rat
1306125Anapc5anaphase-promoting complex subunit 5123374870933781709Rat
620092Camkk2calcium/calmodulin-dependent protein kinase kinase 2123379102333845000Rat
41129989LOC120096090U4 spliceosomal RNA123381990433820064Rat
41132992LOC120095972uncharacterized LOC120095972123382624933828687Rat
62073P2rx4purinergic receptor P2X 4123384460933862265Rat
1598196Rpl32-ps11ribosomal protein L32, pseudogene 11123387057333873601Rat
3241P2rx7purinergic receptor P2X 7123388970933934168Rat
727862Ift81intraflagellar transport 81123395774434037164Rat
2174Atp2a2ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2123407271034122142Rat
1311927Anapc7anaphase promoting complex subunit 7123413121434160819Rat
2324823Rpl38-ps4ribosomal protein L38, pseudogene 4123414722234147659Rat
1311985Arpc3actin related protein 2/3 complex, subunit 3123417278034186651Rat
11445374LOC108352447uncharacterized LOC108352447123417499234179566Rat
41013557LOC120096106small nucleolar RNA SNORA67123418204634182188Rat
1303034Gpn3GPN-loop GTPase 3123418928534198251Rat
1310861Fam216afamily with sequence similarity 216, member A123419852634207673Rat
1308332Vps29VPS29 retromer complex component123420891134217977Rat
1308223Rad9bRAD9 checkpoint clamp component B123421786834248380Rat
1310383Pptc7protein phosphatase targeting COQ7123424996334288339Rat
11517723LOC108352448uncharacterized LOC108352448123426385534267760Rat
1566266Tctn1tectonic family member 1123430979534347190Rat
1310788Hvcn1hydrogen voltage-gated channel 1123434167334370010Rat
3377Ppp1ccprotein phosphatase 1 catalytic subunit gamma123438307234400553Rat
41376041LOC120095977uncharacterized LOC120095977123440810134424345Rat
1562334Ccdc63coiled-coil domain containing 63123442438834453080Rat
41142854LOC1200960785S ribosomal RNA123444480334444920Rat
1564245Myl2myosin light chain 2123445422334468554Rat
41282935LOC120095979uncharacterized LOC120095979123450251234507096Rat
1305967Cux2cut-like homeobox 2123450772334707581Rat
41239638LOC120095978uncharacterized LOC120095978123461097434614202Rat
1310656Pheta1PH domain containing endocytic trafficking adaptor 1123471183134717601Rat
68411Sh2b3SH2B adaptor protein 3123473193434753617Rat
1306637Atxn2ataxin 2123475413234851175Rat
41120407Fbxo22-ps1F-box protein 22, pseudogene 1123479768734808256Rat
1586551BrapBRCA1 associated protein123487453334901030Rat
1310159Acad10acyl-CoA dehydrogenase family, member 10123490121134943973Rat
69219Aldh2aldehyde dehydrogenase 2 family member123494954934982527Rat
1564113Mapkapk5MAPK activated protein kinase 5123499352035013059Rat
621467Adam1aADAM metallopeptidase domain 1a123501743335020300Rat
1596066Tmem116transmembrane protein 116123502191235089409Rat
2322512Adam1ba disintegrin and metallopeptidase domain 1b123503716135040574Rat
619781Erp29endoplasmic reticulum protein 29123508969835095952Rat
41049657LOC120095847uncharacterized LOC120095847123508986335094145Rat
1305685Naa25N(alpha)-acetyltransferase 25, NatB auxiliary subunit123509825635150498Rat
2320799LOC10036456140S ribosomal protein S27-like123513904935139517Rat
6500917LOC10090991140S ribosomal protein S20-like123515593435156460Rat
620171Trafd1TRAF type zinc finger domain containing 1123516560635179525Rat
1309762Hectd4HECT domain E3 ubiquitin protein ligase 4123518216535330935Rat
619826Rpl6ribosomal protein L6123534749335352011Rat
41368808LOC120096111small nucleolar RNA SNORA42/SNORA80 family123535131235351445Rat
3447Ptpn11protein tyrosine phosphatase, non-receptor type 11123536543635424925Rat
620073Rph3arabphilin 3A123554238935618901Rat
1359379Oas1i2 ' -5 ' oligoadenylate synthetase 1I123562456635636608Rat
1310349Oas1d2'-5' oligoadenylate synthetase 1D123564858335658037Rat
621760Oas1a2'-5' oligoadenylate synthetase 1A123566979835680505Rat
1359732Oas1h2 ' -5 ' oligoadenylate synthetase 1H123568286235695717Rat
1359647Oas1f2 ' -5 ' oligoadenylate synthetase 1F123569702435706617Rat
708393Oas1b2-5 oligoadenylate synthetase 1B123572456135735271Rat
1359611Oas1e2'-5' oligoadenylate synthetase 1E123575035935759304Rat
1359279Oas1k2 ' -5 ' oligoadenylate synthetase 1K123576248335771710Rat
1359319Oas32'-5'-oligoadenylate synthetase 3123577902835802781Rat
1359697Oas22'-5' oligoadenylate synthetase 2123580282435830778Rat
1585380Dtx1deltex E3 ubiquitin ligase 1123584964735880835Rat
1311820Rasal1RAS protein activator like 1123588126935913727Rat
2325045Ndufa1-ps2NADH:ubiquinone oxidoreductase subunit A1, pseudogene 2123592133435921801Rat
1561303Cfap73cilia and flagella associated protein 73123592889235935664Rat
1562539Ddx54DEAD-box helicase 54123593471335949956Rat
1306772Rita1RBPJ interacting and tubulin associated 1123595009035953960Rat
1560757IqcdIQ motif containing D123595552235972420Rat
708494Tpcn1two pore segment channel 1123597281336029632Rat
41057520LOC120095848uncharacterized LOC120095848123597663135983611Rat
1565818Slc8b1solute carrier family 8 member B1123602975936053087Rat
708461Plbd2phospholipase B domain containing 2123606280236081984Rat
67376Sdsserine dehydratase123608322636090540Rat
1309192Sdslserine dehydratase-like123609969336109914Rat
71079Lhx5LIM homeobox 5123612618636134625Rat
41331926LOC120095980uncharacterized LOC120095980123614450336146878Rat
1308928Rbm19RNA binding motif protein 19123636577536451033Rat
41089695LOC1200960195S ribosomal RNA123648270236482820Rat
11380654LOC108352451uncharacterized LOC108352451123659268436623169Rat
41304617LOC120095982uncharacterized LOC120095982123665177436658765Rat
1305702Tbx5T-box transcription factor 5123668634436739253Rat
7627339LOC102549962uncharacterized LOC102549962123673937136740501Rat
735203Tbx3T-box transcription factor 3123687992436894849Rat
40970911LOC120095983uncharacterized LOC120095983123692843436930499Rat
11459514LOC108352453uncharacterized LOC108352453123696484036990681Rat
7530977LOC102551773uncharacterized LOC102551773123703967037045930Rat
41036577LOC120095984uncharacterized LOC120095984123708033137084675Rat
41231540LOC120095986uncharacterized LOC120095986123711584337118001Rat
41111709LOC120095985uncharacterized LOC120095985123713407337144790Rat
40969426LOC120095858uncharacterized LOC120095858123714484237151202Rat
41311154LOC120095859uncharacterized LOC120095859123716943637174115Rat
41074579LOC120095987uncharacterized LOC120095987123762211137627400Rat
11363582LOC108352455uncharacterized LOC108352455123774484237753270Rat
1305884Med13lmediator complex subunit 13L123780759638004886Rat
41026805LOC120095989uncharacterized LOC120095989123787102037874725Rat
7734279LOC102552816uncharacterized LOC102552816123802559438034500Rat
7526590LOC102552995uncharacterized LOC102552995123804442338050855Rat
7564907LOC102553129uncharacterized LOC102553129123814660038153400Rat
41302784LOC120096118small nucleolar RNA SNORA17123830499338305111Rat
1562310Spring1SREBF pathway regulator in golgi 1123830622738329175Rat
1560195Rnft2ring finger protein, transmembrane 2123832921738387303Rat
7744953LOC102553921uncharacterized LOC102553921123836155638373100Rat
70549Hrkharakiri, BCL2 interacting protein123838748438409652Rat
1306032Fbxw8F-box and WD repeat domain containing 8123842646638517076Rat
41011079LOC120096099U6 spliceosomal RNA123843249938432604Rat
1566317Tesctescalcin123852183238555665Rat
1307346Fbxo21F-box protein 21123857087838605133Rat
3184Nos1nitric oxide synthase 1123861511138795492Rat
41012245LOC120095990uncharacterized LOC120095990123862418138631305Rat
41254769LOC120095991uncharacterized LOC120095991123864272338650714Rat
1562674Ksr2kinase suppressor of ras 2123880279639187809Rat
7690921LOC102553848acyl-CoA-binding protein-like123916391139166637Rat
41144339LOC120096110small nucleolar RNA SNORA44123917006639170174Rat
1309280Rfc5replication factor C subunit 5123920748439217041Rat
1359599Wsb2WD repeat and SOCS box-containing 2123921764539238634Rat
1565800Vsig10V-set and immunoglobulin domain containing 10123924133239277302Rat
41286864LOC120095992uncharacterized LOC120095992123929703739299789Rat
62017Pebp1phosphatidylethanolamine binding protein 1123930286439307064Rat
1562861Taok3TAO kinase 3123931235439473656Rat
1305986Suds3SDS3 homolog, SIN3A corepressor complex component123947718139499633Rat
41302376LOC120095860uncharacterized LOC120095860123954554239550167Rat
7675930LOC102554374uncharacterized LOC102554374123958115039583257Rat
41022248Ralgds-ps2ral guanine nucleotide dissociation stimulator, pseudogene 2123959944239601966Rat
11384875LOC108352460uncharacterized LOC108352460123972087239738789Rat
11392975LOC108352461uncharacterized LOC108352461123975780739762662Rat
41224417LOC120095994uncharacterized LOC120095994123977578539778923Rat
41006442Trnap-agg39transfer RNA proline (anticodon AGG) 39123982158039821660Rat
1586300Rps17-ps13ribosomal protein S17, pseudogene 13123984069739841104Rat
40940667LOC120095861uncharacterized LOC120095861123998232839985866Rat
1560213Srrm4serine/arginine repetitive matrix 4123999897540158897Rat
41210682Srrm4lserine/arginine repetitive matrix 4 like124008044840089556Rat
41223566LOC120095997uncharacterized LOC120095997124014457340154268Rat
71003Hspb8heat shock protein family B (small) member 8124017640540205002Rat
1564283Ccdc60coiled-coil domain containing 60124031468740480338Rat
7573533LOC102547467uncharacterized LOC102547467124052563240530747Rat
1597489Tmem233transmembrane protein 233124052851540569611Rat
71057Prkab1protein kinase AMP-activated non-catalytic subunit beta 1124058814040598673Rat
70878Citcitron rho-interacting serine/threonine kinase124060307340764846Rat
41305748LOC120095998uncharacterized LOC120095998124068503440687548Rat
41176153LOC120095999uncharacterized LOC120095999124076501740766408Rat
1583822Rplp2-ps3ribosomal protein lateral stalk subunit P2, pseudogene 3124077924240779611Rat
7602651LOC102547619uncharacterized LOC102547619124083750140841544Rat
41141300Trnap-agg85transfer RNA proline (anticodon AGG) 85124086773140867803Rat
1310292Bicdl1BICD family like cargo adaptor 1124087819041001152Rat
1306362Rab35RAB35, member RAS oncogene family124096710240981183Rat
41391313LOC120096002uncharacterized LOC120096002124099020240991987Rat
1593434Gcn1GCN1 activator of EIF2AK4124099151241052661Rat
621247Rplp0ribosomal protein lateral stalk subunit P0124105436341057632Rat
1305759Pxnpaxillin124106079141107952Rat
1586247Rps5-ps2ribosomal protein S5, pseudogene 2124112221641122678Rat
41135141LOC120096084U4 spliceosomal RNA124112523641125376Rat
1310413Sirt4sirtuin 4124112553341139440Rat
41129606LOC120096085U4 spliceosomal RNA124112605041126190Rat
61949Pla2g1bphospholipase A2 group IB124114219341151967Rat
628778Msi1musashi RNA-binding protein 1124115830141251134Rat
7521930LOC102547958uncharacterized LOC102547958124121668041218713Rat
41083923Tmem258-ps2transmembrane protein 258, pseudogene 2124124874241248974Rat
2384Cox6a1cytochrome c oxidase subunit 6A1124126198341265037Rat
1586233Triap1TP53 regulated inhibitor of apoptosis 1124126753441270053Rat
1309698Gatcglutamyl-tRNA amidotransferase subunit C124127009641278067Rat
1309495Srsf9serine and arginine rich splicing factor 9124127822541284502Rat
619866Dynll1dynein light chain LC8-type 1124131236541316157Rat
1310857Coq5coenzyme Q5, methyltransferase124131692241333855Rat
41271627LOC120096006uncharacterized LOC120096006124131798441326372Rat
1309282Rnf10ring finger protein 10124134170841375505Rat
1311819Pop5POP5 homolog, ribonuclease P/MRP subunit124137675541384882Rat
620385Cabp1calcium binding protein 1124138523441448930Rat
7733874LOC102548245uncharacterized LOC102548245124145039141458033Rat
1307736Mlecmalectin124145823441468710Rat
1309359Unc119bunc-119 lipid binding chaperone B124147880841491432Rat
620514Acadsacyl-CoA dehydrogenase short chain124149365041502897Rat
1562826Sppl3signal peptide peptidase like 3124151563541600079Rat
3828Hnf1aHNF1 homeobox A124163853641672806Rat
1311899C12h12orf43similar to human chromosome 12 open reading frame 43124167208941677722Rat
1308586Oasl2'-5'-oligoadenylate synthetase-like124168290041695641Rat
1307351Oasl22'-5' oligoadenylate synthetase-like 2124171007241722687Rat
40977867LOC120096007uncharacterized LOC120096007124171075041711987Rat
15851034930519G04RiklRIKEN cDNA 4930519G04 gene like124173258441755507Rat
41169401LOC120096122small nucleolar RNA SNORA26124178910941789229Rat
1560398C12h12orf76similar to human chromosome 12 open reading frame 76124179133941796200Rat
1308577Ankrd13aankyrin repeat domain 13a124179819641828327Rat
1359708Git2GIT ArfGAP 2124182971741872621Rat
1310813Tchptrichoplein, keratin filament binding124187788841893264Rat
7614337LOC102547088uncharacterized LOC102547088124188522641893935Rat
1564442Gltpglycolipid transfer protein124190716841927321Rat
69337Trpv4transient receptor potential cation channel, subfamily V, member 4124193853341977517Rat
1565883Fam222afamily with sequence similarity 222, member A124198206442033085Rat
41342743Trnaa-agc100transfer RNA alanine (anticodon AGC) 100124205777642057856Rat
621295Mvkmevalonate kinase124214139142158893Rat
1596242Mmabmetabolism of cobalamin associated B124215910942172518Rat
1583074Ube3bubiquitin protein ligase E3B124218375642230094Rat
1591979Kctd10potassium channel tetramerization domain containing 10124223015942248792Rat
1596237Myo1hmyosin IH124224894242300103Rat
1306389Foxn4forkhead box N4124233670642359932Rat
620500Acacbacetyl-CoA carboxylase beta124236580042477651Rat
1307200Unguracil-DNA glycosylase124248527642494217Rat
1306377Alkbh2alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase124249418742500929Rat
1307949Usp30ubiquitin specific peptidase 30124250134542555311Rat
9134602LOC103691493legumain pseudogene124251272942515162Rat
620277SvopSV2 related protein124253099142589381Rat
621138DaoD-amino-acid oxidase124259234242613046Rat
1306038Ssh1slingshot protein phosphatase 1124262112742683262Rat
1564490Coro1ccoronin 1C124271302442785179Rat
1307971Selplgselectin P ligand124279669042809908Rat
11488632LOC108352466uncharacterized LOC108352466124282335442828468Rat
1307573Tmem119transmembrane protein 119124282862142835678Rat
1309562Iscuiron-sulfur cluster assembly enzyme124285230542858150Rat
1311646Sart3spliceosome associated factor 3, U4/U6 recycling protein124285902642887041Rat
1359391FicdFIC domain protein adenylyltransferase124288919542894090Rat
41146318LOC120096010uncharacterized LOC120096010124289598742905233Rat
41126926LOC120095862uncharacterized LOC120095862124291496742917606Rat
41112434LOC120095863uncharacterized LOC120095863124293720242938352Rat
69359Cmklr1chemerin chemokine-like receptor 1124297446243027321Rat
41284396LOC120096012uncharacterized LOC120096012124299611643005468Rat
1589744Wscd2WSC domain containing 2124304654743141115Rat
11399194LOC108352468uncharacterized LOC108352468124324982943255567Rat
7737437LOC102551333uncharacterized LOC102551333124325562443267196Rat
11419569LOC108352469uncharacterized LOC108352469124330133043312674Rat
1308178Sgsm1small G protein signaling modulator 1124332050043386469Rat
1584759Lhfpl7LHFPL tetraspan subfamily member 7124339316643397472Rat
11360541LOC108352470uncharacterized LOC108352470124339939643404333Rat
1306556Kiaa1671KIAA1671 homolog124340947943552152Rat
7504255LOC102552141uncharacterized LOC102552141124349164443496898Rat
61980Crybb3crystallin, beta B3124355710343562120Rat
2417Crybb2crystallin, beta B2124356974743579671Rat
2063Grk3G protein-coupled receptor kinase 3124362477843735375Rat
1594542Myo18bmyosin XVIIIb124374700343953694Rat
40948516LOC120096092U6 spliceosomal RNA124393887243938978Rat
1563628Sez6lseizure related 6 homolog like124406490144221814Rat
7572423Ccdc121l2coiled-coil domain containing 121 like 2124419044544192331Rat
1306020Asphd2aspartate beta-hydroxylase domain containing 2124424813244258653Rat
1308070Hps4HPS4, biogenesis of lysosomal organelles complex 3 subunit 2124426403744294791Rat
1562579SrrdSRR1 domain containing124429467544300287Rat
1311449Tfip11tuftelin interacting protein 11124429961944311851Rat
1305331Tpst2tyrosylprotein sulfotransferase 2124432187544363892Rat
2416Crybb1crystallin, beta B1124436973444383344Rat
61962Cryba4crystallin, beta A4124437873444393226Rat
7567380Miatmyocardial infarction associated transcript124441462044429852Rat
41003863LOC120095864uncharacterized LOC120095864124459700844604029Rat
41330200LOC120096014uncharacterized LOC120096014124461576544629531Rat
7719161LOC102552958uncharacterized LOC102552958124505886645110805Rat
6487645LOC100912310uncharacterized LOC100912310124511013045111784Rat
1565571Mn1MN1 proto-oncogene, transcriptional regulator124518179445220959Rat
620143Pitpnbphosphatidylinositol transfer protein, beta124524930845298388Rat
7646113LOC102554233uncharacterized LOC102554233124531866245323525Rat
1594541Ttc28tetratricopeptide repeat domain 28124534298645783968Rat
7498681LOC102553561uncharacterized LOC102553561124543574645440054Rat
41327822LOC120096015uncharacterized LOC120096015124560248545609252Rat
621543Chek2checkpoint kinase 2124578882345821382Rat
1311005HscbHscB mitochondrial iron-sulfur cluster co-chaperone124582152745831902Rat
1589743Ulk1unc-51 like autophagy activating kinase 1124585171045877966Rat
41264338LOC120096017uncharacterized LOC120096017124587949645891762Rat
1311871Pus1pseudouridine synthase 1124588036445889196Rat
1304733Ep400E1A binding protein p400124589188646002523Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10125DXMgh7230123381916733819400Ratregion
10990D12Mco2240123871454038714782Ratregion
33955D1Mit22124123140994231410080Ratregion
33963D12Mit4198123819280938193007Ratregion
34070D12Mgh7138123569808835698226Ratregion
34086D12Mgh9135124021838040218516Ratregion
34389D12Mgh10138123769148537691617Ratregion
34729D12Mgh5132122806443328064557Ratregion
11281D12Wox15123609153336091690Ratregion
11282D12Arb7340123609137936091727Ratregion
11396D12Mgh11148124164428741644437Ratregion
36101D12Rat15152122830212328302290Ratregion
36119D12Rat94265122905763229057901Ratregion
36125D12Rat14185122862266528622828Ratregion
37334D12Rat46142123039512130395279Ratregion
37366D12Rat54115123579702135797136Ratregion
35431D12Rat22168124589883845899022Ratregion
35433D12Rat17149123082724630827399Ratregion
36818D12Rat25140123921527439215414Ratregion
37080D12Rat21200124276752942767729Ratregion
37830D12Rat36200123210317432103380Ratregion
37874D12Rat31235123907476839075003Ratregion
36490D12Rat18161123470242634702587Ratregion
36671D12Rat19164123663807336638233Ratregion
36795D12Rat24174123237617132376345Ratregion
34898D12Rat20154124324932943249483Ratregion
35126D12Rat16170123042710330427275Ratregion
39620D12Rat80126124102719341027317Ratregion
39712D12Rat86185123828359538283779Ratregion
39740D12Rat85212123684381936844031Ratregion
39844D12Rat76109122830650928306601Ratregion
38084D12Rat96214123165732831657530Ratregion
38108D12Rat50244123395926833959512Ratregion
40454D12Rat100133123445246134452594Ratregion
40668D12Rat78216123088000030880206Ratregion
38410D12Rat53134124282875842828880Ratregion
38658D12Rat49117124520748845207619Ratregion
38730D12Rat55205124077062740770822Ratregion
38736D12Rat48201123615449136154692Ratregion
40112D12Rat84167123491883334919000Ratregion
39060D12Rat30201123297403632974238Ratregion
39332D12Rat52181123531231335312458Ratregion
39416D12Rat87208123875734038757548Ratregion
41962D12Arb6290123568255935682913Ratregion
41962D12Arb6290123568255935682913Ratregion
41156D12Rat79221123508839935088624Ratregion
42966D12Rat95203122964763529647846Ratregion
42967D12Rat106206123039001530390217Ratregion
42970D12Rat108211123722042737220626Ratregion
42971D12Rat112124123861442538614544Ratregion
42972D12Rat109248123681600736816240Ratregion
42974D12Rat110202123663771836637922Ratregion
42975D12Rat113228124268874642688981Ratregion
42379D12Rat111218123627661136276819Ratregion
40766D12Rat77100123026526230265360Ratregion
41626D12Rat93132122860752628607632Ratregion
41688D12Rat97115123613270336132816Ratregion
41786D12Rat101106123481880234818908Ratregion
41826D12Rat107223123213485232135053Ratregion
44997D12Got78173123356343833563611Ratregion
44998D12Got79153123443701334437166Ratregion
45000D12Got85145123624195836242103Ratregion
45001D12Got70226123042706030427288Ratregion
45003D12Got86162123725815337258313Ratregion
45004D12Got83219123599888435999103Ratregion
45005D12Got88197123730388137304078Ratregion
45006D12Got106102123738661837386722Ratregion
45008D12Got89164123725815137258313Ratregion
45009D12Got87264123779635537796618Ratregion
45010D12Got92214123707895537079169Ratregion
45013D12Got93259123910718639107445Ratregion
45014D12Wox8156123847864938478808Ratregion
45016D12Got95129124193658441936713Ratregion
45022D12Got94137124359140143591538Ratregion
45023D12Got97251124281742642817677Ratregion
44991D12Got73271123050685330507124Ratregion
44992D12Got71270123042700230427274Ratregion
44993D12Got72148123025202130252167Ratregion
44994D12Got74134122858850728588641Ratregion
44995D12Got69184122918041829180602Ratregion
60027D12Got75285123570405535704337Ratregion
60028D12Got8089123528824235288330Ratregion
60029D12Got81192123555536635555558Ratregion
60030D12Got82227123584655535846782Ratregion
60031D12Got99172123091167830911850Ratregion
60011D12Got100245124570736845707613Ratregion
61278D12Arb5122806439628064601Ratregion
67357D12Arb16396123608842836088826Ratregion
1631675D12Got216138124247608542476218Ratregion
1628244D12Wox23230124347044043470670Ratregion
1628942D12Wox25162124068474240684904Ratregion
1629309D12Wox18174123838812438388298Ratregion
1629355D12Mco40123082719930827395Ratregion
1641003D12Got229218124031972640319944Ratregion
1632648D12Got215241124128214141282381Ratregion
1633585D12Wox17123609151436091691Ratregion
1636104D12Wox24173123838808938388262Ratregion
1638143D12Wox22195124164427841644473Ratregion
1634462D12Got219139123576158235761721Ratregion
1634514D12Got214178123522520535225385Ratregion
7205978Trpv4117124197264341972760Ratregion
7192562AI717557173123793965237939825Ratregion
7193087D12Mgh6144124112378141123921Ratregion
7193100AA957943197124430000644300203Ratregion
8693306rs8143345123593486635934866Ratregion
8693216rs106542192123365099633650996Ratregion
7206280Ptpn11148123539186935392434Ratregion
7206448Hnf1a274124164574141646015Ratregion
5035885PMC280674P1715123188636531887080Ratregion
5038636BB379394113124217235242172465Ratregion
5038888RH127390196123305100733051203Ratregion
5038942RH127421197124126479541264992Ratregion
7206382fj36f03.x10122881822228819087Ratregion
7206524UniSTS:5468671064124217082142171886Ratregion
7206766ha30420123188460831885786Ratregion
5036669AU048814221124143244741432668Ratregion
5036717AU048977238124281073442810972Ratregion
5036817AU049299243123591660635916849Ratregion
5036825AU049323184122858849228588675Ratregion
5037065D12S2026337123412177934122116Ratregion
5035498AW533080180123525845135258631Ratregion
5033885RH140486172123121453531214707Ratregion
5033941RH140698187123432991534330102Ratregion
5026010RH130563215123133877531338990Ratregion
5028621RH118296196123293523132935427Ratregion
7206126UniSTS:532167946123524989035250836Ratregion
5034021RH141055199124127824641278445Ratregion
5034159RH141592185123194727731947462Ratregion
5028755RH142208152123870988238710034Ratregion
5028833RH142503121123434526134345382Ratregion
5031590AU047822286123688274736883028Ratregion
5034199RH141742194123258741032587604Ratregion
5034329AI511444205124187024841870453Ratregion
5034414BF414070228124376442243764650Ratregion
5026476RH132357184123838707238387256Ratregion
5034506BI280015204124302366443023868Ratregion
5034528BI274486157124426411644264273Ratregion
5034666BF390887174122898741828987592Ratregion
5026632RH132951185124184412241844307Ratregion
5026650RH133018181124187242741872608Ratregion
5029387RH144598150123521857635218726Ratregion
5026898RH133958187123534765135348064Ratregion
5026902RH133976195123418246834182663Ratregion
5032211D84372133123542147635421609Ratregion
5032269AI85241987124356009743560184Ratregion
5035006TCF1155124166312041663630Ratregion
5027036RH134486198123200924232009439Ratregion
5035356AW529993150123424817934248329Ratregion
5027183SHGC-152361277124343812443438397Ratregion
5029769BF387151170123826687538267045Ratregion
5027299AI843918101124422144344221544Ratregion
5027301AW544490124123475453834754662Ratregion
5027303AW049835110123420941234209522Ratregion
5032729RH135086218124015864940158867Ratregion
5035262AI102299170123839067538390845Ratregion
5030123BE098792203123162805031628253Ratregion
5030135BI286497220124127750741277727Ratregion
5030179BF395959124123198649931986623Ratregion
5025006BB09435694124357957743579671Ratregion
5027761RH94638188123862640038626588Ratregion
5030249BE111456204123857238338572587Ratregion
5030355AW533646161124119113241191293Ratregion
5030355AW533646161124119113241191684Ratregion
5027773RH94686183123871472138714904Ratregion
5030401BE106118174123614664636146820Ratregion
5030445BE106487158123326166433261822Ratregion
5030479BF403268212123434263234342844Ratregion
5033301RH138330157123393849833938643Ratregion
5033303RH138337250124439148244393065Ratregion
8693405rs65296962124472602444726024Ratregion
8693406rs8143351124355178843551788Ratregion
5030803BE120218177124184295041843127Ratregion
5030821BE120393170122832882428328994Ratregion
5030825BE120455158123441077734410935Ratregion
5030863AA956464196123921849939218789Ratregion
5028257D5Mit118157123420598134206142Ratregion
5031021BE121081182123836349938363681Ratregion
5033691RH139759214124373504843735262Ratregion
5025864RH129983150123568035135680501Ratregion
5025864RH129983150123568035135680501Ratregion
5028450AI25622383124525041745250500Ratregion
5028452AA987064163122908225829082421Ratregion
5031143AA925036117123370096133701078Ratregion
5051841RH94689107124164560341645710Ratregion
5052075RH94825207123542146435421671Ratregion
5054975RH143533202124015525440155456Ratregion
5055147RH143632261123266502832665289Ratregion
5051170RH134480188123136236031362548Ratregion
5051170RH134480188123136236031362548Ratregion
5051232RH134515198124248543042485628Ratregion
5051278RH134542180124250165942501839Ratregion
5053435RH142647109124338630343386412Ratregion
5053745RH142826173123213784332138016Ratregion
5054003RH142974126123342967633429802Ratregion
5056555RH144446191124096616340966354Ratregion
5056619RH144483139124221970442219843Ratregion
5056877RH144632157123242672032426877Ratregion
5051821RH94677259124436974844370007Ratregion
5051839RH94688178124167121141671389Ratregion
5052005RH94784299124167173441672033Ratregion
5054079RH143018251124179259841792849Ratregion
5057094AI454805188123575907935759267Ratregion
5055371RH143763108124192705141927159Ratregion
5054479RH143248221123780853837808759Ratregion
5059396AW530578166123246621432466380Ratregion
5059480BI291178191123780980037809991Ratregion
5055597RH143892132123413133334131477Ratregion
5055615RH143903170123424872134248891Ratregion
5054907RH143493136123393000933930145Ratregion
5058592BE102132180122960165729601840Ratregion
5058666BE102291152123245279732452949Ratregion
5056395RH144353115123379317133793286Ratregion
5058764BF387061160124006667340066833Ratregion
5059642BE097508150124258920942589359Ratregion
5056135RH144202236123915692939157165Ratregion
5056697RH144528144124134828541348429Ratregion
5056871RH144629198124555188145552079Ratregion
5056977RH144689176123117276731172943Ratregion
5052448AU041434128124587760645877734Ratregion
5058858BF393753115122828419028284305Ratregion
5055451RH143808106124017682140176927Ratregion
5052573RH125644234123205257932052813Ratregion
5058924BF387255151123427724034277391Ratregion
5059010BF387352174124418276544182939Ratregion
5059022BF387385184123204520432045388Ratregion
5059718BE103003166124421917244219338Ratregion
5059878BI279065181123203352232033703Ratregion
5059892BF388151181123502006935020250Ratregion
5058324BF41930790123352979933529889Ratregion
5058378BG37680094122876253828762632Ratregion
5059120BI278447163123498229934982460Ratregion
5059140BF387545185124171830941718494Ratregion
5050276RH133963205124232275742322963Ratregion
5053487RH142677185124551022145510406Ratregion
5059232AI137218240123593590435936144Ratregion
5059236BI278729174124271398542714159Ratregion
5057636BF392370170123243851232438682Ratregion
5050534RH134112168123258881732588985Ratregion
5050706RH134211220123503467235034892Ratregion
5050710RH134213181124119022741190408Ratregion
5050078RH133849206123301664833016854Ratregion
5050998RH134379214123124532831245542Ratregion
5050240RH133942200123921668039216880Ratregion
5052813RH142288200124524942845249628Ratregion
5051166RH134477218124583145845831676Ratregion
5051284RH134545208124019091140191119Ratregion
5051397AW554476125123305042433050549Ratregion
5051399AW22870094123312865433128748Ratregion
5054217RH143097179123471470634714885Ratregion
5050496RH134090203124417584844176051Ratregion
5053173RH142496155123688009136880245Ratregion
5054575RH143303219123284018832840407Ratregion
5050906RH134326198124150252641502724Ratregion
5051080RH134428220124126777741267997Ratregion
5044038RH130374192123563623735636429Ratregion
5044116RH130419188124511095245111681Ratregion
5040764RH128470188124151582041516008Ratregion
5044342RH130548201124581297945813268Ratregion
5045148RH131011183123517927135179454Ratregion
5045210RH131047180124096576340965943Ratregion
5045350RH131127213123433959734339817Ratregion
5045456RH131188194124283544442835638Ratregion
5045534RH131233196123123484331235039Ratregion
5041500RH128892212123301747033017682Ratregion
5043960RH130330167123420744134207608Ratregion
5045632RH131289203124068488040685083Ratregion
5045720RH131340211123247889032479101Ratregion
5046122RH131571193123602935836029551Ratregion
5046274RH131658212124096728440967496Ratregion
5047542RH132387210123384155233841762Ratregion
5045248RH131069180124259036342590543Ratregion
5047584RH132412182123561865135618833Ratregion
5047584RH132412182123561865135618833Ratregion
5047584RH132412182123574101135741193Ratregion
5047584RH132412182123574101135741193Ratregion
5047588RH132414208124288929742889505Ratregion
5048926RH133186205123881014738810459Ratregion
5047852RH132566198123587939335879591Ratregion
5047856RH132568210123588053635880746Ratregion
5045912RH131450194123494334634943540Ratregion
5046952RH132049182123830639338306575Ratregion
5047040RH132099186123289244332892629Ratregion
5047150RH132162215123931410839314323Ratregion
5047242RH132215195124442949344429688Ratregion
5039496RH127739195123225865632258851Ratregion
5041982RH129170158123471187734712517Ratregion
5042060RH1292150123223466332234860Ratregion
5042202RH129298168124285234742852515Ratregion
5047264RH132227181123234577732345958Ratregion
5048552RH132969216124288674542886961Ratregion
5048558RH132972198124113919841139396Ratregion
5049494RH133513184124131702841317212Ratregion
5042698RH129592219124268300242683231Ratregion
5042698RH129592219124268300242683363Ratregion
5041964RH129160197123111310531113303Ratregion
5042018RH129191207124534298945343196Ratregion
5042078RH129226182124285236942852551Ratregion
5042216RH129307198123509564035095838Ratregion
5040500RH128319191123370387333704064Ratregion
5039686RH127849180124524945145249631Ratregion
5039810RH127920184124218388042184064Ratregion
5039912RH127979203123930680939307012Ratregion
5042340RH129378197124137524041375437Ratregion
5043556RH130093184124149123741491421Ratregion
5040120RH128101182124285237242852554Ratregion
5040146RH128116180123851677738516957Ratregion
5042616RH129542194123487457334874767Ratregion
5042714RH129601215123266256132662776Ratregion
5041048RH128633220123509517035095838Ratregion
5041094RH128659184123542467935424863Ratregion
5041176RH128706151123388976133889912Ratregion
5043680RH130165201123434050334340704Ratregion
5043742RH130201187124525042445250611Ratregion
5043878RH130280183123602980936029992Ratregion
5040352RH128234192124224842442248616Ratregion
5040398RH128260214123857113338571347Ratregion
5040594RH128373213124192704941927262Ratregion
5072678RH136989207124288967242889879Ratregion
5072734RH137022169123424970834249877Ratregion
5075082RH138388172123416050934160681Ratregion
5075328RH138531136123846974238469878Ratregion
5075390RH138566123123593745035938536Ratregion
5072420RH136839227122911658229116809Ratregion
5072500RH136885199124059836240598561Ratregion
5076014RH138929192123248382232484014Ratregion
5076326RH139111134123393000833930142Ratregion
5074698RH138167126123182286831822995Ratregion
5076680RH139316170123258822132588391Ratregion
5077034RH139521203123838766838387871Ratregion
5077046RH139528198124186846641868664Ratregion
5075450RH138601138124115835141158489Ratregion
5074846RH138252196122908339329083591Ratregion
5076124RH138993214123402637634026590Ratregion
5079492RH141029193123339247233392665Ratregion
5076702RH139329123123501246435012930Ratregion
5076338RH139117213123833454538334758Ratregion
5079586RH141086211123470728134707492Ratregion
5079606RH141098218124579081745791035Ratregion
5079660RH141130181123608291536083175Ratregion
5077120RH139572218123117162531171843Ratregion
5077198RH139619196124214157642141772Ratregion
5077368RH139716192123333927433339466Ratregion
5076446RH139180139123321338633213525Ratregion
5078358RH140294201124127659541276796Ratregion
5078466RH140359224123838756638387790Ratregion
5078474RH140364160124186850441868664Ratregion
5078532RH140398173124088176040881933Ratregion
5078542RH140404143123117162531171768Ratregion
5079962RH141303198123949936239499560Ratregion
5078598RH14043691123352980433529895Ratregion
5079038RH140699181124266149042661671Ratregion
5079176RH140780182123266267632662858Ratregion
5079180RH140782143123780920537809348Ratregion
5080386RH141549206124167135941671565Ratregion
5073452RH137444218124413428944134507Ratregion
5073468RH137453207123588145835881665Ratregion
5080450RH141586201124187800541878206Ratregion
5078814RH140567184124146910841469292Ratregion
5073622RH137543124124513823645138360Ratregion
5073674RH137573147123927594239276089Ratregion
5070614RH134603205124217224442172449Ratregion
5072872RH137103185123312857633128761Ratregion
5071522RH135131186123857193138572117Ratregion
5071558RH135152211123805010938050320Ratregion
5073964RH137740178124131587141316049Ratregion
5070916RH134780193123949857939498772Ratregion
5073218RH137309188124307451143074699Ratregion
5073316RH137366190123384464333844833Ratregion
5073340RH137380150123203450632034656Ratregion
5073430RH137431185123931681039316995Ratregion
5071904RH135352195123117706231177257Ratregion
5071936RH135370200124167286641673450Ratregion
5073564RH137509217123476196134762178Ratregion
5073592RH137525236124278487742785113Ratregion
5073702RH137589196123593478135934977Ratregion
5072194RH136707144123661779436617938Ratregion
5074700RH138168166124441392844414094Ratregion
5071766RH135272186123564876235648948Ratregion
5061782AW533444153122922127729221430Ratregion
5064982BE108813170123210450332104673Ratregion
5065112BF405907177124425846744258644Ratregion
5067026AU048009127123029517330295300Ratregion
5067050AU047995216123745548637455670Ratregion
5067050AU047995216123745548637456073Ratregion
5067050AU047995216123745585737456073Ratregion
5067100AU047964210123646851036468718Ratregion
5067328AU047820202122829406428294266Ratregion
5067428AU047752184124182727341827457Ratregion
5067470AU047724238123386776033867998Ratregion
5067578AU047661128122919341129193541Ratregion
5067610AU047642165122919340529193572Ratregion
5068076AU047362156124233071342330864Ratregion
5068068AU047367342124514740645147744Ratregion
5068858AU046882174124373029143730458Ratregion
5068860AU046881284123435041334350692Ratregion
5069652AU046359175124128218841282363Ratregion
5069094AU046729188124373028143730465Ratregion
5069144AU046697165123709364037093805Ratregion
5069208AU046648124123821459738214721Ratregion
5070426RH13550293124137537841375471Ratregion
5069286AU046598191123577181835772000Ratregion
5060228BI279846187124105175341051939Ratregion
5063564BI289921203123230413432304337Ratregion
5063748AI717557196123793868037939674Ratregion
5065138AI044850181124518194945182125Ratregion
5060418BE110007168123170048831700656Ratregion
5060466BE110153157124020481240204969Ratregion
5060624BE110694159123446102234461180Ratregion
5062286BF403047149123504167135041820Ratregion
5062288BE106489167124304701343047180Ratregion
5065520AA957943121124430012944300250Ratregion
5060954BF389547143123014645930146602Ratregion
5062594BE106902162123383902033839182Ratregion
5064446BE108001195124425753544257730Ratregion
5065758BF406370138123914826639148408Ratregion
5065922BE116124212122911524129115453Ratregion
5062016BI294736218123272763832727856Ratregion
5062052BI294823189123527998535280174Ratregion
5065334BI297100153124536111545361497Ratregion
5065334BI297100153124536134445361497Ratregion
5065460BF412122151123417919934179350Ratregion
5060602BE110564160123194957631949736Ratregion
5062190BF397544204123306576433065968Ratregion
5062434BF403270190123894688838947078Ratregion
5062464BF397929139124134486741345006Ratregion
5065596BE109426192123830924938309441Ratregion
5065702BF406235157122883729128837448Ratregion
5060950BF389531133123958126739581400Ratregion
5064274BE120958207123880347638803683Ratregion
5065904BE116030166123782041437820580Ratregion
5065990BE116442175123383493533835110Ratregion
5066040AA925378207122908971429089921Ratregion
5061086AW532199153124431216344312316Ratregion
5061114AW532394196123587199135872187Ratregion
5061176BE111117159124146977641469935Ratregion
5066132BF413523192124171177441711966Ratregion
5061260BE099469186123831146138311647Ratregion
5064764BF405038119124136414441364263Ratregion
5061348BF396285123123339607133396194Ratregion
5063198BE113888189123851371438513903Ratregion
5063204BF410495116123009374230093861Ratregion
5064930BE108707205124326387643264081Ratregion
5066450AU048349132123402023234020366Ratregion
5084352AA945300202123509832435098526Ratregion
5084354AI176623163123924141839241581Ratregion
5086363AA874832191123378147633781667Ratregion
5082383BI274645158123608220136082359Ratregion
5082523BE119619156123785938837859544Ratregion
5087266AI555147208123804869038048898Ratregion
5089895AU049427292124579875645799048Ratregion
5089921AU049443124123663778736637911Ratregion
5083099BI275132220124267791842678138Ratregion
5088269AU048467127123031755430317681Ratregion
5089401AU049134152123568274335682895Ratregion
5089401AU049134152123568274335682895Ratregion
5083429BI282133202123730824237308444Ratregion
5083475BI282368215124429987344300088Ratregion
5083619BI276461171123333881633338991Ratregion
5088305AU048490237123127772531277962Ratregion
5088371AU048529227123856359938563825Ratregion
5083691BG375003121122827291428273035Ratregion
5089587AU04924498122904332929043427Ratregion
5089613AU049259269122998086329981132Ratregion
5083960AI599956140123595359535953735Ratregion
5084118AA894309176124432199644322172Ratregion
5090105AU049553203123198992231990125Ratregion
5087171BQ207717197123442993834430135Ratregion
5081817BI273758152124236606242366214Ratregion
5082125BF409796221123402809734028318Ratregion
5084908AI171702211124506352945063740Ratregion
5082423BE119364169124367887843679047Ratregion
5085110AW531792150123583498735835136Ratregion
5090531AU049807198123508392535084125Ratregion
5088717AU048735193122946698329467176Ratregion
5088863AU048815175124178856141788736Ratregion
5085387BM390241201123216447932164680Ratregion
5085760BM390895181123262837032628551Ratregion
5081398AI500967211123948426439484475Ratregion
5080714RH141739183122908215229082335Ratregion
5080868RH1418290124148863141488827Ratregion
5080868RH1418290124148863141488931Ratregion
5080924RH141862199123194916231949361Ratregion
5082841BF390223159124409927444099433Ratregion
5083203BI275304166123222969532229861Ratregion
5083203BI275304166123222969532229861Ratregion
5081414AI502108184123425075434250938Ratregion
5083383BF391026197124121850041218697Ratregion
5083697BF418128209124130677341307220Ratregion
5083697BF418128209124130701141307220Ratregion
5081787BE118263156123674030436740460Ratregion
5085736BF388086155123256131532561470Ratregion
5085828BF388170183123522322435223407Ratregion
5503332UniSTS:238074466123859212538592591Ratregion
5507703D11S1348796124106948041070277Ratregion
5504093SART3537124288374342884280Ratregion
5504869ha27170123126613931267576Ratregion
5505566UniSTS:482327320124217296542173285Ratregion
5505879UniSTS:49598892122810014028100232Ratregion
5505976Rmrp353124137724241377595Ratregion
5506282G29083115124064179640641911Ratregion
5506221Dtx10123587877635879086Ratregion
5506256Dm1974720124077070840771428Ratregion
5506288STS-Z413780122834094528341480Ratregion
5506729G44856274123428446934284743Ratregion
5499633MARC_5817-5818:991939742:3300122948832129488621Ratregion
5499605MARC_2373-2374:991932707:1334123475445034755580Ratregion
5499891UniSTS:235264344124373120943731553Ratregion
5499665MARC_7037-7038:992008225:1660124430262444303284Ratregion
5501007PMC115916P1268124164559441645862Ratregion
5500396GDB:437697440123871013138710571Ratregion
5499837UniSTS:234929717123285697132857688Ratregion
5502733RSRC2168123285696632857134Ratregion
5500847G15902192123411886734119059Ratregion
5500877D21S18921387123776270837764097Ratregion
5500370GDB:362766183124436982044370003Ratregion
5500408GDB:45513084123338655033386634Ratregion
5500595RH136107196124215670342157810Ratregion
5503644UniSTS:4654521480123587852035880000Ratregion
5501922MARC_17487-17488:1030377680:10123478863334790159Ratregion
5501776MARC_12083-12084:1008774253:1100124218546242186660Ratregion
5502313RH1244050123339714833397359Ratregion
5502345RH124557175123205257232052747Ratregion
5502875Fzd10838122810022528101063Ratregion
Position Markers

Flank 1: (D12Mgh5)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21228,064,433 - 28,064,557 (+)MAPPER
Rnor_6.01231,723,565 - 31,723,688NCBI
Rnor_5.01233,647,399 - 33,647,522UniSTS
RGSC_v3.41229,130,180 - 29,130,304RGD
RGSC_v3.41229,130,181 - 29,130,304UniSTS
RGSC_v3.11228,993,569 - 28,993,692RGD
Celera1229,756,877 - 29,756,993UniSTS
RH 3.4 Map12466.8UniSTS
RH 3.4 Map12466.8RGD
RH 2.0 Map12343.2RGD
SHRSP x BN Map1231.95RGD
Cytogenetic Map12 RGD
Peak: (D12Rat36)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21232,103,174 - 32,103,380 (+)MAPPER
Rnor_6.01237,521,884 - 37,522,089NCBI
Rnor_5.01239,392,710 - 39,392,915UniSTS
RGSC_v3.41233,216,128 - 33,216,333UniSTS
RGSC_v3.41233,216,127 - 33,216,334RGD
RGSC_v3.11233,079,515 - 33,079,722RGD
Celera1233,793,327 - 33,793,532UniSTS
RH 3.4 Map12555.2RGD
RH 3.4 Map12555.2UniSTS
RH 2.0 Map12430.4RGD
SHRSP x BN Map1242.1399RGD
Cytogenetic Map12q15UniSTS
Flank 2: (D12Rat22)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21245,898,838 - 45,899,022 (+)MAPPER
Rnor_6.01251,955,573 - 51,955,754NCBI
Rnor_5.01253,693,924 - 53,694,105UniSTS
RGSC_v3.41246,043,375 - 46,043,557RGD
RGSC_v3.41246,043,376 - 46,043,557UniSTS
RGSC_v3.11245,907,502 - 45,907,684RGD
Celera1247,458,247 - 47,458,428UniSTS
RH 3.4 Map12794.1UniSTS
RH 3.4 Map12794.1RGD
RH 2.0 Map12582.4RGD
SHRSP x BN Map1254.0099RGD
Cytogenetic Map12q16UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)121914436246669029Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
8693635Alc28Alcohol consumption QTL 282.70.439drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)122308134044726024Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)121961087046669029Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
737822Alc10Alcohol consumption QTL 102.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)121961087040218516Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)121587265332974238Rat
70169Eae13Experimental allergic encephalomyelitis QTL 130.032nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)122413920236638073Rat
1600386Calcic2Intracellular calcium level QTL 20.001platelet physiology trait (VT:0005464)platelet intracellular calcium level (CMO:0000922)122806443346669029Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
1556747Calcic1Intracellular calcium level QTL 13.6platelet calcium amount (VT:0010500)platelet intracellular calcium level (CMO:0000922)122806443340130419Rat
631829Alc6Alcohol consumption QTL 64.7consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)122860752637691617Rat
8693658Alc33Alcohol consumption QTL 332.10.68drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)122308134043551788Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12134851688Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382545055165Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
1331763Wbc2White blood cell count QTL 23.162leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)122423477731894213Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
1300157Rf21Renal function QTL 214.4renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)12931821632103380Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961088935682913Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121047413746669029Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
1331755Bp219Blood pressure QTL 2193.041arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382528064557Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121983578938193007Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411643Foco20Food consumption QTL 200.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)122032881946669029Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961087042828880Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101318273646669029Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121319815746669029Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
1300162Bp188Blood pressure QTL 1883.19arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)123210317445899022Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
1549902Bp269Blood pressure QTL 269arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121318273646669029Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121235161946669029Rat
1300175Cm5Cardiac mass QTL 53.78heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)122806443345899022Rat
1331787Rf41Renal function QTL 412.998kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)122806455740218380Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121047413746669029Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
61416Pia4Pristane induced arthritis QTL 48.4joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)121363552330827399Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12136247923Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121363552335682913Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121281238546669029Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12844949028302290Rat
631543Bp83Blood pressure QTL 835.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121555082638478808Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Cm5

RGD Curation Notes
Note Type Note Reference
qtl_general additional information, including phenotype and mapping information, can be found at Genomic Map of Cardiovascular Phenotypes 727992
qtl_general left ventricle weight divided by body weight 727992