Pitpnb (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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mRatBN7.2 | 12 | 45,249,308 - 45,298,388 (-) | NCBI | mRatBN7.2 | | | | mRatBN7.2 Ensembl | 12 | 45,249,333 - 45,298,314 (-) | Ensembl | | | | | Rnor_6.0 | 12 | 51,279,194 - 51,341,752 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 12 | 51,280,150 - 51,341,716 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 12 | 53,020,763 - 53,083,078 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 12 | 45,386,041 - 45,434,744 (-) | NCBI | RGSC3.4 | | rn4 | RGSC3.4 | RGSC_v3.1 | 12 | 45,249,428 - 45,298,132 (-) | NCBI | | | | | Celera | 12 | 46,815,703 - 46,863,897 (-) | NCBI | | Celera | | | RH 3.4 Map | 12 | 811.51 | RGD | | | | | Cytogenetic Map | 12 | q16 | NCBI | | | | |
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PITPNB (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 22 | 27,851,669 - 27,919,256 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p13 Ensembl | 22 | 27,851,669 - 27,920,134 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 22 | 28,247,657 - 28,315,244 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 22 | 26,577,657 - 26,645,255 (-) | NCBI | NCBI36 | | hg18 | NCBI36 | Build 34 | 22 | 26,572,211 - 26,639,809 | NCBI | | | | | Celera | 22 | 12,047,622 - 12,115,220 (-) | NCBI | | | | | Cytogenetic Map | 22 | q12.1 | NCBI | | | | | HuRef | 22 | 11,211,977 - 11,279,827 (-) | NCBI | | HuRef | | | CHM1_1 | 22 | 28,206,929 - 28,274,545 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 22 | 28,313,107 - 28,380,672 (-) | NCBI | | | | |
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Pitpnb (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 5 | 111,478,563 - 111,536,225 (+) | NCBI | GRCm39 | | mm39 | | GRCm39 Ensembl | 5 | 111,478,629 - 111,536,225 (+) | Ensembl | | | | | GRCm38 | 5 | 111,330,697 - 111,388,359 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 111,330,763 - 111,388,359 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 111,759,783 - 111,817,379 (+) | NCBI | GRCm37 | | mm9 | NCBIm37 | MGSCv36 | 5 | 111,571,066 - 111,628,662 (+) | NCBI | | | mm8 | | Celera | 5 | 108,458,102 - 108,515,847 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | F | NCBI | | | | |
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Pitpnb (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955455 | 2,211,870 - 2,275,118 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955455 | 2,210,019 - 2,275,206 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PITPNB (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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PanPan1.1 | 22 | 26,622,957 - 26,690,509 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 22 | 26,624,899 - 26,685,588 (-) | Ensembl | panpan1.1 | | panPan2 | | Mhudiblu_PPA_v0 | 22 | 8,903,075 - 8,970,712 (-) | NCBI | Mhudiblu_PPA_v0 | | panPan3 | |
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PITPNB (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 26 | 21,304,464 - 21,369,221 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 26 | 21,306,217 - 21,369,153 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 26 | 21,175,308 - 21,240,063 (-) | NCBI | | | | | ROS_Cfam_1.0 | 26 | 21,671,155 - 21,735,940 (-) | NCBI | | | | | ROS_Cfam_1.0 Ensembl | 26 | 21,661,087 - 21,735,913 (-) | Ensembl | | | | | UMICH_Zoey_3.1 | 26 | 21,388,919 - 21,453,617 (-) | NCBI | | | | | UNSW_CanFamBas_1.0 | 26 | 21,644,580 - 21,709,555 (-) | NCBI | | | | | UU_Cfam_GSD_1.0 | 26 | 21,713,376 - 21,778,146 (-) | NCBI | | | | |
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Pitpnb (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405118 | 113,712,480 - 113,775,567 (+) | NCBI | | | | | SpeTri2.0 | NW_004936657 | 2,095,140 - 2,158,184 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PITPNB (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 14 | 45,185,451 - 45,250,084 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 45,185,705 - 45,250,089 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 48,079,115 - 48,143,553 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PITPNB (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 19 | 10,758,359 - 10,826,821 (-) | NCBI | ChlSab1.1 | | chlSab2 | | ChlSab1.1 Ensembl | 19 | 10,761,589 - 10,821,852 (-) | Ensembl | ChlSab1.1 | | chlSab2 | | Vero_WHO_p1.0 | NW_023666045 | 115,293,666 - 115,362,179 (+) | NCBI | Vero_WHO_p1.0 | | | |
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Pitpnb (Heterocephalus glaber - naked mole-rat) |
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