Cmklr1 (chemerin chemokine-like receptor 1)

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Gene: Cmklr1 (chemerin chemokine-like receptor 1) Rattus norvegicus

Analyze

Symbol:

Cmklr1

Name:

chemerin chemokine-like receptor 1

RGD ID:

69359

Description:

Predicted to enable adipokinetic hormone binding activity and adipokinetic hormone receptor activity. Predicted to be involved in several processes, including negative regulation of interleukin-12 production; positive regulation of cold-induced thermogenesis; and positive regulation of macrophage chemotaxis. Predicted to be located in plasma membrane. Orthologous to human CMKLR1 (chemerin chemokine-like receptor 1); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 17beta-hydroxy-5alpha-androstan-3-one.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

chemerin-like receptor 1; chemokine receptor-like 1; chemokine-like receptor 1; G-protein coupled chemoattractant-like receptor; G-protein coupled receptor DEZ

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	12	42,974,462 - 43,027,321 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	42,974,410 - 43,028,129 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	44,186,820 - 44,191,095 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	44,800,395 - 44,804,670 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	43,860,934 - 43,865,209 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	48,743,556 - 48,796,582 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	48,789,261 - 48,793,553 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	50,531,209 - 50,584,406 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	44,056,527 - 44,061,043 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	43,921,991 - 43,923,110 (+)	NCBI
Celera	12	44,621,019 - 44,625,349 (+)	NCBI		Celera
Cytogenetic Map	12	q16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

granulosa cell tumor (ISO)

pre-eclampsia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

17beta-estradiol 3-benzoate (EXP)

17beta-hydroxy-5alpha-androstan-3-one (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

8-Br-cAMP (ISO)

acetamide (EXP)

aflatoxin B1 (EXP)

ammonium chloride (EXP)

antirheumatic drug (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

chloroprene (ISO)

cisplatin (ISO)

coumarin (ISO)

decabromodiphenyl ether (EXP)

diarsenic trioxide (ISO)

dibutyl phthalate (EXP)

dichlorine (EXP)

doxorubicin (ISO)

endosulfan (EXP)

entinostat (ISO)

fenvalerate (EXP)

gentamycin (EXP)

graphite (EXP)

lead(0) (ISO)

lipopolysaccharide (ISO)

Monobutylphthalate (ISO)

monosodium L-glutamate (ISO)

N-methyl-4-phenylpyridinium (ISO)

nickel atom (ISO)

niclosamide (ISO)

ozone (EXP,ISO)

paracetamol (EXP,ISO)

paraquat (EXP)

phorbol 13-acetate 12-myristate (ISO)

pirinixic acid (ISO)

progesterone (EXP)

rotenone (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sodium arsenite (ISO)

Soman (EXP)

testosterone (EXP)

thioacetamide (EXP)

trichloroethene (EXP)

triclosan (ISO)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chemotaxis (IBA,ISO,ISS)

complement receptor mediated signaling pathway (IBA)

G protein-coupled receptor signaling pathway (ISO,ISS)

inflammatory response (IBA)

negative regulation of interleukin-12 production (ISO,ISS)

phospholipase C-activating G protein-coupled receptor signaling pathway (IBA)

positive regulation of cold-induced thermogenesis (ISO,ISS)

positive regulation of cytosolic calcium ion concentration (IBA)

positive regulation of fat cell differentiation (ISO,ISS)

positive regulation of macrophage chemotaxis (IBA,ISO)

regulation of calcium-mediated signaling (IBA,ISO,ISS)

Cellular Component

plasma membrane (IBA,ISO,ISS)

Molecular Function

adipokinetic hormone binding (ISO,ISS)

adipokinetic hormone receptor activity (ISO,ISS)

complement receptor activity (IBA)

G protein-coupled chemoattractant receptor activity (TAS)

G protein-coupled receptor activity (IBA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	CMKLR1 deficiency influences glucose tolerance and thermogenesis in mice on high fat diet.	Huang C, etal., Biochem Biophys Res Commun. 2016 Apr 29;473(2):435-41. doi: 10.1016/j.bbrc.2016.03.026. Epub 2016 Mar 10.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
5.	Molecular cloning and tissue distribution of cDNA encoding a novel chemoattractant-like receptor.	Owman C, etal., Biochem Biophys Res Commun 1997 Dec 18;241(2):390-4.
6.	GOA pipeline	RGD automated data pipeline
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:14530373	PMID:15753205	PMID:17033093	PMID:17635925	PMID:19443732	PMID:22796467	PMID:23154239	PMID:25471554	PMID:27371688	PMID:27742615	PMID:27860453	PMID:30257454
PMID:30595125	PMID:31965243	PMID:32462328	PMID:34461109	PMID:34769243

Genomics

Comparative Map Data

Cmklr1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	12	42,974,462 - 43,027,321 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	42,974,410 - 43,028,129 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	44,186,820 - 44,191,095 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	44,800,395 - 44,804,670 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	43,860,934 - 43,865,209 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	48,743,556 - 48,796,582 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	48,789,261 - 48,793,553 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	50,531,209 - 50,584,406 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	44,056,527 - 44,061,043 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	43,921,991 - 43,923,110 (+)	NCBI
Celera	12	44,621,019 - 44,625,349 (+)	NCBI		Celera
Cytogenetic Map	12	q16	NCBI

CMKLR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	108,288,046 - 108,339,311 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	108,288,044 - 108,339,317 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	108,681,823 - 108,733,088 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	107,209,477 - 107,257,212 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	107,187,813 - 107,235,553	NCBI
Celera	12	108,351,249 - 108,402,507 (-)	NCBI		Celera
Cytogenetic Map	12	q23.3	NCBI
HuRef	12	105,746,498 - 105,797,979 (-)	NCBI		HuRef
CHM1_1	12	108,647,879 - 108,699,141 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	108,256,268 - 108,307,509 (-)	NCBI		T2T-CHM13v2.0

Cmklr1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	113,750,415 - 113,792,971 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	113,750,415 - 113,788,487 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	113,612,355 - 113,650,475 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	113,612,354 - 113,650,426 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	114,062,364 - 114,100,399 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	113,873,360 - 113,911,389 (-)	NCBI		MGSCv36	mm8
Celera	5	110,714,182 - 110,752,271 (-)	NCBI		Celera
Cytogenetic Map	5	F	NCBI
cM Map	5	55.55	NCBI

Cmklr1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955455	9,589,822 - 9,590,937 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955455	9,587,421 - 9,638,602 (-)	NCBI	ChiLan1.0	ChiLan1.0

CMKLR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	12	116,347,528 - 116,395,965 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	105,859,702 - 105,911,010 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	109,256,329 - 109,307,526 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	109,260,130 - 109,261,271 (-)	Ensembl	panpan1.1		panPan2

CMKLR1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	18,487,700 - 18,539,678 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	18,532,479 - 18,533,576 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	17,254,935 - 17,309,701 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	18,836,295 - 18,888,040 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	18,836,443 - 18,884,494 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	17,467,315 - 17,495,005 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	18,824,230 - 18,875,966 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	18,845,535 - 18,897,317 (+)	NCBI		UU_Cfam_GSD_1.0

Cmklr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	145,171,728 - 145,175,406 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936769	302,391 - 304,166 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CMKLR1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	42,420,177 - 42,468,058 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	42,420,166 - 42,468,080 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	44,964,240 - 44,977,991 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Sscrofa10.2	14	45,116,776 - 45,118,925 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	14	q21.1	NCBI

CMKLR1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	103,484,422 - 103,536,273 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666037	141,555,941 - 141,609,279 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cmklr1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624747	11,553,268 - 11,601,105 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Cmklr1
261 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	148
Count of miRNA genes:	112
Interacting mature miRNAs:	126
Transcripts:	ENSRNOT00000000893
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
737979	Pia22	Pristane induced arthritis QTL 22	53.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	1	44465750	Rat
634351	Apr5	Acute phase response QTL 5	6.7		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	12	1	44503507	Rat
2302042	Pia38	Pristane induced arthritis QTL 38	3.5	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	12	1	44503507	Rat
634350	Apr4	Acute phase response QTL 4	6		orosomucoid 1 amount (VT:0010541)	plasma orosomucoid 1 level (CMO:0001467)	12	1172005	46172005	Rat
8552918	Pigfal7	Plasma insulin-like growth factor 1 level QTL 7			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	5564495	46669029	Rat
7411547	Bw129	Body weight QTL 129		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	6	5564495	46669029	Rat
7411597	Foco10	Food consumption QTL 10		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	5564495	46669029	Rat
7411641	Foco19	Food consumption QTL 19	27.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	5564495	46669029	Rat
8552964	Pigfal17	Plasma insulin-like growth factor 1 level QTL 17	3.5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	5564495	46669029	Rat
7411588	Foco6	Food consumption QTL 6		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	5564495	46669029	Rat
8552912	Pigfal6	Plasma insulin-like growth factor 1 level QTL 6	5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	5564498	46669029	Rat
10059594	Kidm46	Kidney mass QTL 46	3.79	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	12	6107579	46669029	Rat
1302792	Scl21	Serum cholesterol level QTL 21	3.8	0.0011	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	12	7196730	46669029	Rat
1549829	Scl48	Serum cholesterol level QTL 48	5		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	12	9603277	46669029	Rat
2293699	Bss49	Bone structure and strength QTL 49	5.61	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	12	10474137	46669029	Rat
2300186	Bmd59	Bone mineral density QTL 59	7.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	12	10474137	46669029	Rat
1331761	Bp218	Blood pressure QTL 218	2.973		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	12	11073825	45055165	Rat
61404	Bw120	Body weight QTL 120	5.1		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	12	12351619	46669029	Rat
1641928	Alcrsp5	Alcohol response QTL 5			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	12	12812385	46669029	Rat
2303569	Gluco44	Glucose level QTL 44	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	12812385	46669029	Rat
1549902	Bp269	Blood pressure QTL 269			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	12	13182736	46669029	Rat
1549912	Bp268	Blood pressure QTL 268			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	10	13182736	46669029	Rat
2302060	Pia37	Pristane induced arthritis QTL 37	6.1	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	12	13198157	46669029	Rat
631560	Apr1	Acute phase response QTL 1	6.1		orosomucoid 1 amount (VT:0010541)	plasma orosomucoid 1 level (CMO:0001467)	12	19144362	46669029	Rat
61324	Eae5	Experimental allergic encephalomyelitis QTL 5	14		nervous system integrity trait (VT:0010566)	percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)	12	19610870	46669029	Rat
7411643	Foco20	Food consumption QTL 20		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	20328819	46669029	Rat
1300175	Cm5	Cardiac mass QTL 5	3.78		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	12	28064433	45899022	Rat
1600386	Calcic2	Intracellular calcium level QTL 2		0.001	platelet physiology trait (VT:0005464)	platelet intracellular calcium level (CMO:0000922)	12	28064433	46669029	Rat
1300162	Bp188	Blood pressure QTL 188	3.19		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	12	32103174	45899022	Rat

Markers in Region

BI280015

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	43,023,664 - 43,023,868 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	48,792,926 - 48,793,129	NCBI	Rnor6.0
Rnor_5.0	12	50,580,750 - 50,580,953	UniSTS	Rnor5.0
RGSC_v3.4	12	44,060,416 - 44,060,619	UniSTS	RGSC3.4
Celera	12	44,624,722 - 44,624,925	UniSTS
Cytogenetic Map	12	q16	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium		2			3						3	11
Low	3	41	57	41	16	41	8	11	74	35	38		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_022218	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC128917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ002745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB707803	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000229	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000000893 ⟹ ENSRNOP00000000893

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	42,974,410 - 43,028,129 (+)	Ensembl
Rnor_6.0 Ensembl	12	48,789,261 - 48,793,553 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000097365 ⟹ ENSRNOP00000089521

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	43,009,352 - 43,028,129 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000101222 ⟹ ENSRNOP00000085339

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	43,003,952 - 43,028,129 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000105285 ⟹ ENSRNOP00000091942

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	42,984,998 - 43,028,129 (+)	Ensembl

RefSeq Acc Id:

NM_022218 ⟹ NP_071554

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	12	43,020,000 - 43,024,292 (+)	NCBI
Rnor_6.0	12	48,789,261 - 48,793,553 (+)	NCBI
Rnor_5.0	12	50,531,209 - 50,584,406 (+)	NCBI
RGSC_v3.4	12	44,056,527 - 44,061,043 (+)	RGD
Celera	12	44,621,019 - 44,625,349 (+)	RGD

Sequence:

show sequence

GTATTTCTAGCCGTGCACAGTGACTGATCAGCCGAGGACCTACCCTCGAGTTCTATTCTGCAAC
AGTGAACAGTGAAGGTCTCCAAAGAGATGGAGTACGAGGGTTACAACGACTCCAGCATCTACGG
TGAGGAGTATTCTGACGGCTCGGACTACATCGTGGACTTGGAGGAGGCGGGTCCACTGGAGGCC
AAGGTGGCCGAGGTCTTCCTGGTGGTAATCTACAGCTTGGTGTGCTTCCTCGGGATCCTAGGCA
ATGGCCTGGTGATTGTCATCGCCACCTTCAAGATGAAGAAGACGGTGAACACCGTGTGGTTTGT
CAACCTGGCCGTGGCTGACTTCCTGTTCAACATCTTCTTGCCCATCCACATCACCTATGCCGCT
ATGGACTACCACTGGGTGTTCGGGAAAGCCATGTGCAAGATTAGTAGCTTTCTGCTAAGCCACA
ACATGTACACCAGCGTCTTCCTGCTCACTGTCATCAGCTTCGACCGCTGCATCTCCGTGCTCCT
CCCCGTCTGGTCCCAGAACCACCGCAGCGTGCGTCTGGCCTACATGACCTGCGTGGTTGTCTGG
GTCCTGGCTTTCTTCCTGAGTTCCCCGTCCCTCGTCTTCCGGGACACGGTCAGCACCAGCCACG
GGAAGATAACCTGCTTCAACAACTTCAGCCTGGCCGCGCCCGAGCCTTTCTCTCATTCCACCCA
CCCGCGAACAGACCCGGTAGGGTACAGCAGACATGTGGCGGTCACCGTCACCCGCTTCCTCTGT
GGCTTCCTGATCCCCGTCTTCATCATCACGGCCTGTTACCTCACCATCGTCTTCAAGTTGCAGC
GCAACCGCCTGGCCAAGACCAAGAAGCCCTTCAAGATCATCATCACCATCATCATCACCTTCTT
CCTCTGCTGGTGCCCCTACCACACACTCTACCTGCTGGAGCTCCACCACACGGCTGTGCCAGCC
TCTGTCTTCAGCCTGGGACTGCCCCTGGCCACAGCCGTTGCCATCGCCAACAGCTGTATGAACC
CCATCCTGTACGTCTTCATGGGCCACGACTTCAAAAAATTCAAGGTGGCCCTTTTCTCCCGCCT
GGTGAATGCCCTGAGCGAGGACACAGGACCCTCCTCCTACCCCAGTCACAGGAGCTTCACCAAG
ATGTCCTCATTGATTGAGAAGGCTTCAGTGAATGAGAAAGAGACCAGCACCCTCTGAGCCTTCC
CTGGGACTGTCCCCAATGGGCTCCACAGCCCAGGGACTTGTCTCCTGAGGTAGGAGACACGCCT
GGAGCCTTTGGGTATGCCCCAGCGCCCGCTACGTCTTGCGCAAGGCGGCCCATTGTTTTGGGTG
GAGTTCCCAAGTGTGGACACTCTTCCAGCAAAATGGCAGACAAGCAACCTGAGCCCCTGCAGCA
GGAGTATAGGACCAACTTCCACCGGCTCAGAAAAGGGAGGGTCTCTGAAACCAAGGTCTGAGCT
GTGACCCACATACAGGCACACAATTTCACTGTGGATGCCCCAAACATGCTGCACAGTCTCCAGT
GTGGGTGAGGACGTCACTGCAGACCTGTTATGGCGACATGACAGTCAAACCAGCAAATACCCCA
CCACCACTGTCATCCTCCAAGATCTTGACTTTGGATTTCAGAAAAATGGGGAGGACCAGGACCT
GAGGGGCTTCATAGAACTTGCTTGCAAGGGCAGCCCAGGTGTGTGTGTGTGTATGTGCTTGTGT
GTGTGTGTGTGTGTATGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGAAGAGG
TGGAGACAGAGAGCAGAGAACCCCAAAGGATGTGGGTACAGGATATCTCACACCATCATGCCAC
AGGGAGACAGAGCTACAACGATGGGTGCTTGGGGGTTCAGATGGTGGCAGCTCTTTGCTTCAGT
GTGTATACCCCCCTAGCACTGTACCCCCAGGCTGGAGGGGGGCTCTTCACAGAAGCTTCCAACC
CATTCCAGCACTGGCTGGAAGGGCTTGGGATGTCCCTGGAGACTGGTCTGGGACTATCTTCAAA
GCGTCTTCCAAAGGCTGCTGCTGACCAGCTCACCTGACTCCTCCTTGAACACACTCCCCACGTG
GGGCATCACAGCCCCGATGGCAGCCCAGGATCAGGCCTCCCTCCCTTGACAGGGAAATGACTCA
CCCAACCCCATGCACTGTCAGTAACAAAGACCCAGGCCCAGCTCCACCTGGCTGATGTCATTCC
CTCCCTGGGGATGGGGTCGCTTGCATTTATTTAACATGTCCCACACCATGTTAAGCACTTCACA
CGTTATCTTCTCATTTATTCTTCACGGAAACCTGGGGTAGGTCCTCGTGCATGTGAGGAAGCAG
AGGCTCAGAGAGGTTAAGCAACTGGCCCAAGGGGGCCCAGCTAGGTGTTGGCAGAGACCGGATT
AGAACCCCAGTTCTCCTGGCTGAAAGGAAGATGGAGAGTCAGCGGTGGGGGAAGCTAATGGGTT
TGGGGTTTTAGCCACAAATACAGGTTTTTCAGTG

hide sequence

RefSeq Acc Id:

XM_006249505 ⟹ XP_006249567

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	12	43,009,703 - 43,027,321 (+)	NCBI
Rnor_6.0	12	48,778,897 - 48,796,582 (+)	NCBI
Rnor_5.0	12	50,531,209 - 50,584,406 (+)	NCBI

Sequence:

show sequence

GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGCAGCTGCCAGGAGCCCAGGTGCTTGCAAAGGT
GAGAGATGTAGGTGAAGGGCCATGACTAGGACAGGGAGGGGGATTACAGAGAAAGACAAAAAGA
AGCAGAGAGAGAGAGAGAGAGAGAGAGGGAGGTCCAGAAGCCAGCAGGAGGGACAGGCAAGGAA
TAGGACCCCATGTGGCCCAGGGGTACAGAAGGGACAGAAGCAGAGTTGAAGACAGACAGACATC
TGCTGGTCAGATGTCTCCTGCACCATCCTCTGCCCATGGGGGTGGGGAGCACATGCCAATGAGA
GGCGGCGGCAGAGGCGGACCCCTGTCTTCACAGGCAGCACAGGCTTATTCTGCCTCTCACCAGG
TATTTCTAGCCGTGCACAGTGACTGATCAGCCGAGGACCTACCCTCGAGTTCTATTCTGCAACA
GTGAACAGTGAAGGTCTCCAAAGAGATGGAGTACGAGGGTTACAACGACTCCAGCATCTACGGT
GAGGAGTATTCTGACGGCTCGGACTACATCGTGGACTTGGAGGAGGCGGGTCCACTGGAGGCCA
AGGTGGCCGAGGTCTTCCTGGTGGTAATCTACAGCTTGGTGTGCTTCCTCGGGATCCTAGGCAA
TGGCCTGGTGATTGTCATCGCCACCTTCAAGATGAAGAAGACGGTGAACACCGTGTGGTTTGTC
AACCTGGCCGTGGCTGACTTCCTGTTCAACATCTTCTTGCCCATCCACATCACCTATGCCGCTA
TGGACTACCACTGGGTGTTCGGGAAAGCCATGTGCAAGATTAGTAGCTTTCTGCTAAGCCACAA
CATGTACACCAGCGTCTTCCTGCTCACTGTCATCAGCTTCGACCGCTGCATCTCCGTGCTCCTC
CCCGTCTGGTCCCAGAACCACCGCAGCGTGCGTCTGGCCTACATGACCTGCGTGGTTGTCTGGG
TCCTGGCTTTCTTCCTGAGTTCCCCGTCCCTCGTCTTCCGGGACACGGTCAGCACCAGCCACGG
GAAGATAACCTGCTTCAACAACTTCAGCCTGGCCGCGCCCGAGCCTTTCTCTCATTCCACCCAC
CCGCGAACAGACCCGGTAGGGTACAGCAGACATGTGGCGGTCACCGTCACCCGCTTCCTCTGTG
GCTTCCTGATCCCCGTCTTCATCATCACGGCCTGTTACCTCACCATCGTCTTCAAGTTGCAGCG
CAACCGCCTGGCCAAGACCAAGAAGCCCTTCAAGATCATCATCACCATCATCATCACCTTCTTC
CTCTGCTGGTGCCCCTACCACACACTCTACCTGCTGGAGCTCCACCACACGGCTGTGCCAGCCT
CTGTCTTCAGCCTGGGACTGCCCCTGGCCACAGCCGTTGCCATCGCCAACAGCTGTATGAACCC
CATCCTGTACGTCTTCATGGGCCACGACTTCAAAAAATTCAAGGTGGCCCTTTTCTCCCGCCTG
GTGAATGCCCTGAGCGAGGACACAGGACCCTCCTCCTACCCCAGTCACAGGAGCTTCACCAAGA
TGTCCTCATTGATTGAGAAGGCTTCAGTGAATGAGAAAGAGACCAGCACCCTCTGAGCCTTCCC
TGGGACTGTCCCCAATGGGCTCCACAGCCCAGGGACTTGTCTCCTGAGGTAGGAGACACGCCTG
GAGCCTTTGGGTATGCCCCAGCGCCCGCTACGTCTTGCGCAAGGCGGCCCATTGTTTTGGGTGG
AGTTCCCAAGTGTGGACACTCTTCCAGCAAAATGGCAGACAAGCAACCTGAGCCCCTGCAGCAG
GAGTATAGGACCAACTTCCACCGGCTCAGAAAAGGGAGGGTCTCTGAAACCAAGGTCTGAGCTG
TGACCCACATACAGGCACACAATTTCACTGTGGATGCCCCAAACATGCTGCACAGTCTCCAGTG
TGGGTGAGGACGTCACTGCAGACCTGTTATGGCGACATGACAGTCAAACCAGCAAATACCCCAC
CACCACTGTCATCCTCCAAGATCTTGACTTTGGATTTCAGAAAAATGGGGAGGACCAGGACCTG
AGGGGCTTCATAGAACTTGCTTGCAAGGGCAGCCCAGGTGTGTGTGTGTGTATGTGCTTGTGTG
TGTGTGTGTGTGTATGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGAAGAGGT
GGAGACAGAGAGCAGAGAACCCCAAAGGATGTGGGTACAGGATATCTCACACCATCATGCCACA
GGGAGACAGAGCTACAACGATGGGTGCTTGGGGGTTCAGATGGTGGCAGCTCTTTGCTTCAGTG
TGTATACCCCCCTAGCACTGTACCCCCAGGCTGGAGGGGGGCTCTTCACAGAAGCTTCCAACCC
ATTCCAGCACTGGCTGGAAGGGCTTGGGATGTCCCTGGAGACTGGTCTGGGACTATCTTCAAAG
CGTCTTCCAAAGGCTGCTGCTGACCAGCTCACCTGACTCCTCCTTGAACACACTCCCCACGTGG
GGCATCACAGCCCCGATGGCAGCCCAGGATCAGGCCTCCCTCCCTTGACAGGGAAATGACTCAC
CCAACCCCATGCACTGTCAGTAACAAAGACCCAGGCCCAGCTCCACCTGGCTGATGTCATTCCC
TCCCTGGGGATGGGGTCGCTTGCATTTATTTAACATGTCCCACACCATGTTAAGCACTTCACAC
GTTATCTTCTCATTTATTCTTCACGGAAACCTGGGGTAGGTCCTCGTGCATGTGAGGAAGCAGA
GGCTCAGAGAGGTTAAGCAACTGGCCCAAGGGGGCCCAGCTAGGTGTTGGCAGAGACCGGATTA
GAACCCCAGTTCTCCTGGCTGAAAGGAAGATGGAGAGTCAGCGGTGGGGGAAGCTAATGGGTTT
GGGGTTTTAGCCACAAATACAGGTTTTTCAGTGGATCCACGTGGACACCTTAATAGCCTTTACG
AGGTTTTGCATGTTGTTTTCAGAGCAATCCAACATTCGAAGAAAAGGCTGTCTCCAGCCTCAGC
CCCCATGGGTCCCATCACGCACACCCTGAAATCTGCTGAGTGAGCATAGGAGGAGCCTGGCAGG
TCAGCCTCTCTGGTCCAAGGCCTTCTGGCCCCTGCAGTGTCCTCTGTTCTCCTCCAAGCCACTT
CTCCACCGGGGCAAAACACACAGACATGCGTCCTCTGGCCTGGCCAGTTCCCGAATTTTAGATT
GCTGGGAGTCACACCTCATCAGGGGACAGACTGTTCCTCCCCGGTTGGGTCTTACGATGAGGCA
GTTCCAAACTGATCCAAGCTGGAACCTCTGGCTTCTCGGAGAGCGGAATGTACAGGGGAGGTTT
AGTACAGGGGAGGTTTAAAAATAGCCTCGTGTTCCCATTGTCCCGCCCCTACCCTCCCAGGGCT
ACACATGTGCAACCAAGGCATGCCAGGGTCTGGGATTCATCATATCAACAGAGATGCCTGTCCG
TGACCAGGCCACATGGCCCCTTGGACAGTGCACTTCCTGGAGGGCTGGCCAGGCCAGGCAGGGG
ACCAGCAAATCTTTTGCCATTGGAAAAACTGACCAGCAGGAGTGTTACGCCAGTCCATGTCAAC
CCCCTAGAGCCCACCCTCTTCCTCTTCCTCCTGGCTGTCATAACACCCCTGTGCTGACTTCAGT
TCACGCCAAGTGCTAAGTGAAACCTTCAGCCTTGTCCTCACGGACTTCTCACAGCCTAACTGCC
CCCGATCCCCCGTCTCCCAGGACTTACATATAATCCCTGCAGCTGGCAAAGTGCTGTGGCCCTC
TATGTCCCCCTAAAGACCAACAGGGCCAGCAGCGCCTTCTCTGGAGCTGGGACCCAGCAGATGG
CCTCACGGGCTGCCCCCCGGGTGGGTGATGAGCGGTGGGACCAAGACAAGGTGTGGAGGGACAA
GAAGGGGAGACCGCTGGAGTGTGGGGGAGGGGAGCGGAGTGTGCTTCTGAGCATCCAGATGCCA
AGGAGCACTGTAGTCTGTGCTTGGACCCCGGGGAGGACGATGCTGTGTCCCTGTGTGGCATGCA
GAAACTTAAGTAAGGGCCACACGGCTAGGAAGTAATGTGGGGCTTCAGGGCTTGGAACTGACAT
TACCTTTGTCAGCCTATGGAAACAGGATGGGGAGGGAGGAGGGAGGACAGAAGGGAAGACAGAA
AGGAGGGAGGGAGAACAGGCAATGGAGTAAAGCCGCCCCACCTTGGAATCCCCATCTCTGTTGA
GCCATCCAGGTTCTCTTTGAAACATCATCTCCAGGGACTCCCTGTCAAAAGAGTGACCTTGGGT
CTGTGTTTTTTGAGGTCCCTCATGGGGAGGGTCAGACTTCTCCAAGGCCAGGGATGTGCCCTAG
GGAAAGACTGGTGCTGCCTGGGGAGAGTGGGCTGGTGTTGAGTGGGTGGAAGGTCCAGGAGGGC
TCCAGGTGGACCTGCAGGGGTGGCAGGCCAGGACTCCTGGGGAGGGAGAGAGCCATGTGGGAGC
CCTGAGGGCTGGGCTGCAGGGAGCAGGGAACGGGAGGTGGACAGAAGACCAGGGCTGGGGAGAC
ACTGTGCAGACTGATCTGCTCAGACCTGCTTGTTGAGTCTGCTGTGGAGAGCACTGGGAGGAGG
AAGCCAGGAGGCTACAGCATTGAGCAGCAGGAGCCCCAGAGGCCTCCAGACTGGGAGAGCTGGA
GAGAGCAGAGGGCTCGGTATTTAAAAGCTCTGAGCTTTCTCAGGGGAGCGGTTAGCAGGAAGCC
AACGCTGGGCCCATCTGTGCAGCACAGAGGTCCTGCTGCATTAGTCTGTTGATGGAAATTAATT
GTAAATATTATTCAAACGTACCTCCCAGTGCACAATTATACTTCTCAGGGGAGTTCTCTGAGTA
CATCGGGAAACTCTGTAAATAATACATACATTAGCCCAGGCGTGCTAATGCTGTGTCGAGGTTG
TGGCTGCCAGAATCACTCCAAGTGTTTGTGCAGGGGGTTAGCCTTGGACACCCAGACGTGTCTC
CTCCAGAGGATGGGGGCAACCCTAGGCATGCCACCCAACTCCTGGCCTAGATGCCTGGTCACTG
GGCAGGTGGGGACACAGAGCTGGAGAGAGAGGAAGACACACAGGTCCAGAGAATGCCCCGCTGT
GCTGAAGAGGTTCAGTGGCTGCTGCACTAAAAATGTGGCCTGGCTGTGCTCAGGCTTGGGGCAA
GCACTTAGGGAGTCCTTTTTGATAAGACCCAGCGCCACGCCTATAGATGGATGAAGAGATGGAG
AGATTCATAAAGGTGAGGGGTTTGCATAAGGTCATATAGTCAGTGAGAGCCCTGTCGTCTGGTT
GTCTGTCTGTTAGAAAGTTCTTGCTTTCCCAAGAAGTTAGTCAGTCTCTGTCCTCCACCCCCAA
CCCCCACTCCCAACTCCTGCAAGTCCAAGGACTGCGTTGTCCTTGGAGGGGAAGGGTATGGCAT
TTACAGGGTTTGCCAGTCAGTTCCTCTCAGCCCTTGGGCTTTGGGAGAGACACTGCTTCAAGCC
CATCCCTTCTCAGTGCCCCCCCCACTTCCCCTGGGTTTCACAGATCACAAAATTGAGCAGGATG
GTGTGGTTTGGGGGACACCCCCTCCCACCTCACTGAGGGTGTCCACGTGCTCCTGAGAGTCAGT
TTAAAAGATCAGCTTAGATACCCACGGTTCACCAAGCTGCCCCCTTCATCCCCGAGCTTTCAGC
ATCAGCTTCGGTGAACGTTTGCCCCGGGTCCAGCAGAATCCTGGCTGAAGTAGAGGCAGGTCTC
AGCAAAAACCCGCTTTAGAGCAGAGGCAAGATATTCCTAAGACGTTTTCACTGTTGGCCTGGAT
GTGGGTAGGTGGTGTCTCTGGAAGTAATGACAGGAGCCGTAACAAACTCTCAATCTGTCTGTCT
GAGATGAAGATGCCTTTTGAAAATAAAATTAAAGATCTTTTAGAAGCAAATCAA

hide sequence

RefSeq Acc Id:

XM_006249506 ⟹ XP_006249568

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	12	43,005,812 - 43,027,321 (+)	NCBI
Rnor_6.0	12	48,778,870 - 48,796,582 (+)	NCBI
Rnor_5.0	12	50,531,209 - 50,584,406 (+)	NCBI

Sequence:

show sequence

AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGCAGCT
GCCAGGAGCCCAGGTGCTTGCAAAGGTATTTCTAGCCGTGCACAGTGACTGATCAGCCGAGGAC
CTACCCTCGAGTTCTATTCTGCAACAGTGAACAGTGAAGGTCTCCAAAGAGATGGAGTACGAGG
GTTACAACGACTCCAGCATCTACGGTGAGGAGTATTCTGACGGCTCGGACTACATCGTGGACTT
GGAGGAGGCGGGTCCACTGGAGGCCAAGGTGGCCGAGGTCTTCCTGGTGGTAATCTACAGCTTG
GTGTGCTTCCTCGGGATCCTAGGCAATGGCCTGGTGATTGTCATCGCCACCTTCAAGATGAAGA
AGACGGTGAACACCGTGTGGTTTGTCAACCTGGCCGTGGCTGACTTCCTGTTCAACATCTTCTT
GCCCATCCACATCACCTATGCCGCTATGGACTACCACTGGGTGTTCGGGAAAGCCATGTGCAAG
ATTAGTAGCTTTCTGCTAAGCCACAACATGTACACCAGCGTCTTCCTGCTCACTGTCATCAGCT
TCGACCGCTGCATCTCCGTGCTCCTCCCCGTCTGGTCCCAGAACCACCGCAGCGTGCGTCTGGC
CTACATGACCTGCGTGGTTGTCTGGGTCCTGGCTTTCTTCCTGAGTTCCCCGTCCCTCGTCTTC
CGGGACACGGTCAGCACCAGCCACGGGAAGATAACCTGCTTCAACAACTTCAGCCTGGCCGCGC
CCGAGCCTTTCTCTCATTCCACCCACCCGCGAACAGACCCGGTAGGGTACAGCAGACATGTGGC
GGTCACCGTCACCCGCTTCCTCTGTGGCTTCCTGATCCCCGTCTTCATCATCACGGCCTGTTAC
CTCACCATCGTCTTCAAGTTGCAGCGCAACCGCCTGGCCAAGACCAAGAAGCCCTTCAAGATCA
TCATCACCATCATCATCACCTTCTTCCTCTGCTGGTGCCCCTACCACACACTCTACCTGCTGGA
GCTCCACCACACGGCTGTGCCAGCCTCTGTCTTCAGCCTGGGACTGCCCCTGGCCACAGCCGTT
GCCATCGCCAACAGCTGTATGAACCCCATCCTGTACGTCTTCATGGGCCACGACTTCAAAAAAT
TCAAGGTGGCCCTTTTCTCCCGCCTGGTGAATGCCCTGAGCGAGGACACAGGACCCTCCTCCTA
CCCCAGTCACAGGAGCTTCACCAAGATGTCCTCATTGATTGAGAAGGCTTCAGTGAATGAGAAA
GAGACCAGCACCCTCTGAGCCTTCCCTGGGACTGTCCCCAATGGGCTCCACAGCCCAGGGACTT
GTCTCCTGAGGTAGGAGACACGCCTGGAGCCTTTGGGTATGCCCCAGCGCCCGCTACGTCTTGC
GCAAGGCGGCCCATTGTTTTGGGTGGAGTTCCCAAGTGTGGACACTCTTCCAGCAAAATGGCAG
ACAAGCAACCTGAGCCCCTGCAGCAGGAGTATAGGACCAACTTCCACCGGCTCAGAAAAGGGAG
GGTCTCTGAAACCAAGGTCTGAGCTGTGACCCACATACAGGCACACAATTTCACTGTGGATGCC
CCAAACATGCTGCACAGTCTCCAGTGTGGGTGAGGACGTCACTGCAGACCTGTTATGGCGACAT
GACAGTCAAACCAGCAAATACCCCACCACCACTGTCATCCTCCAAGATCTTGACTTTGGATTTC
AGAAAAATGGGGAGGACCAGGACCTGAGGGGCTTCATAGAACTTGCTTGCAAGGGCAGCCCAGG
TGTGTGTGTGTGTATGTGCTTGTGTGTGTGTGTGTGTGTATGTGCATGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTTGAAGAGGTGGAGACAGAGAGCAGAGAACCCCAAAGGATGTGGGTAC
AGGATATCTCACACCATCATGCCACAGGGAGACAGAGCTACAACGATGGGTGCTTGGGGGTTCA
GATGGTGGCAGCTCTTTGCTTCAGTGTGTATACCCCCCTAGCACTGTACCCCCAGGCTGGAGGG
GGGCTCTTCACAGAAGCTTCCAACCCATTCCAGCACTGGCTGGAAGGGCTTGGGATGTCCCTGG
AGACTGGTCTGGGACTATCTTCAAAGCGTCTTCCAAAGGCTGCTGCTGACCAGCTCACCTGACT
CCTCCTTGAACACACTCCCCACGTGGGGCATCACAGCCCCGATGGCAGCCCAGGATCAGGCCTC
CCTCCCTTGACAGGGAAATGACTCACCCAACCCCATGCACTGTCAGTAACAAAGACCCAGGCCC
AGCTCCACCTGGCTGATGTCATTCCCTCCCTGGGGATGGGGTCGCTTGCATTTATTTAACATGT
CCCACACCATGTTAAGCACTTCACACGTTATCTTCTCATTTATTCTTCACGGAAACCTGGGGTA
GGTCCTCGTGCATGTGAGGAAGCAGAGGCTCAGAGAGGTTAAGCAACTGGCCCAAGGGGGCCCA
GCTAGGTGTTGGCAGAGACCGGATTAGAACCCCAGTTCTCCTGGCTGAAAGGAAGATGGAGAGT
CAGCGGTGGGGGAAGCTAATGGGTTTGGGGTTTTAGCCACAAATACAGGTTTTTCAGTGGATCC
ACGTGGACACCTTAATAGCCTTTACGAGGTTTTGCATGTTGTTTTCAGAGCAATCCAACATTCG
AAGAAAAGGCTGTCTCCAGCCTCAGCCCCCATGGGTCCCATCACGCACACCCTGAAATCTGCTG
AGTGAGCATAGGAGGAGCCTGGCAGGTCAGCCTCTCTGGTCCAAGGCCTTCTGGCCCCTGCAGT
GTCCTCTGTTCTCCTCCAAGCCACTTCTCCACCGGGGCAAAACACACAGACATGCGTCCTCTGG
CCTGGCCAGTTCCCGAATTTTAGATTGCTGGGAGTCACACCTCATCAGGGGACAGACTGTTCCT
CCCCGGTTGGGTCTTACGATGAGGCAGTTCCAAACTGATCCAAGCTGGAACCTCTGGCTTCTCG
GAGAGCGGAATGTACAGGGGAGGTTTAGTACAGGGGAGGTTTAAAAATAGCCTCGTGTTCCCAT
TGTCCCGCCCCTACCCTCCCAGGGCTACACATGTGCAACCAAGGCATGCCAGGGTCTGGGATTC
ATCATATCAACAGAGATGCCTGTCCGTGACCAGGCCACATGGCCCCTTGGACAGTGCACTTCCT
GGAGGGCTGGCCAGGCCAGGCAGGGGACCAGCAAATCTTTTGCCATTGGAAAAACTGACCAGCA
GGAGTGTTACGCCAGTCCATGTCAACCCCCTAGAGCCCACCCTCTTCCTCTTCCTCCTGGCTGT
CATAACACCCCTGTGCTGACTTCAGTTCACGCCAAGTGCTAAGTGAAACCTTCAGCCTTGTCCT
CACGGACTTCTCACAGCCTAACTGCCCCCGATCCCCCGTCTCCCAGGACTTACATATAATCCCT
GCAGCTGGCAAAGTGCTGTGGCCCTCTATGTCCCCCTAAAGACCAACAGGGCCAGCAGCGCCTT
CTCTGGAGCTGGGACCCAGCAGATGGCCTCACGGGCTGCCCCCCGGGTGGGTGATGAGCGGTGG
GACCAAGACAAGGTGTGGAGGGACAAGAAGGGGAGACCGCTGGAGTGTGGGGGAGGGGAGCGGA
GTGTGCTTCTGAGCATCCAGATGCCAAGGAGCACTGTAGTCTGTGCTTGGACCCCGGGGAGGAC
GATGCTGTGTCCCTGTGTGGCATGCAGAAACTTAAGTAAGGGCCACACGGCTAGGAAGTAATGT
GGGGCTTCAGGGCTTGGAACTGACATTACCTTTGTCAGCCTATGGAAACAGGATGGGGAGGGAG
GAGGGAGGACAGAAGGGAAGACAGAAAGGAGGGAGGGAGAACAGGCAATGGAGTAAAGCCGCCC
CACCTTGGAATCCCCATCTCTGTTGAGCCATCCAGGTTCTCTTTGAAACATCATCTCCAGGGAC
TCCCTGTCAAAAGAGTGACCTTGGGTCTGTGTTTTTTGAGGTCCCTCATGGGGAGGGTCAGACT
TCTCCAAGGCCAGGGATGTGCCCTAGGGAAAGACTGGTGCTGCCTGGGGAGAGTGGGCTGGTGT
TGAGTGGGTGGAAGGTCCAGGAGGGCTCCAGGTGGACCTGCAGGGGTGGCAGGCCAGGACTCCT
GGGGAGGGAGAGAGCCATGTGGGAGCCCTGAGGGCTGGGCTGCAGGGAGCAGGGAACGGGAGGT
GGACAGAAGACCAGGGCTGGGGAGACACTGTGCAGACTGATCTGCTCAGACCTGCTTGTTGAGT
CTGCTGTGGAGAGCACTGGGAGGAGGAAGCCAGGAGGCTACAGCATTGAGCAGCAGGAGCCCCA
GAGGCCTCCAGACTGGGAGAGCTGGAGAGAGCAGAGGGCTCGGTATTTAAAAGCTCTGAGCTTT
CTCAGGGGAGCGGTTAGCAGGAAGCCAACGCTGGGCCCATCTGTGCAGCACAGAGGTCCTGCTG
CATTAGTCTGTTGATGGAAATTAATTGTAAATATTATTCAAACGTACCTCCCAGTGCACAATTA
TACTTCTCAGGGGAGTTCTCTGAGTACATCGGGAAACTCTGTAAATAATACATACATTAGCCCA
GGCGTGCTAATGCTGTGTCGAGGTTGTGGCTGCCAGAATCACTCCAAGTGTTTGTGCAGGGGGT
TAGCCTTGGACACCCAGACGTGTCTCCTCCAGAGGATGGGGGCAACCCTAGGCATGCCACCCAA
CTCCTGGCCTAGATGCCTGGTCACTGGGCAGGTGGGGACACAGAGCTGGAGAGAGAGGAAGACA
CACAGGTCCAGAGAATGCCCCGCTGTGCTGAAGAGGTTCAGTGGCTGCTGCACTAAAAATGTGG
CCTGGCTGTGCTCAGGCTTGGGGCAAGCACTTAGGGAGTCCTTTTTGATAAGACCCAGCGCCAC
GCCTATAGATGGATGAAGAGATGGAGAGATTCATAAAGGTGAGGGGTTTGCATAAGGTCATATA
GTCAGTGAGAGCCCTGTCGTCTGGTTGTCTGTCTGTTAGAAAGTTCTTGCTTTCCCAAGAAGTT
AGTCAGTCTCTGTCCTCCACCCCCAACCCCCACTCCCAACTCCTGCAAGTCCAAGGACTGCGTT
GTCCTTGGAGGGGAAGGGTATGGCATTTACAGGGTTTGCCAGTCAGTTCCTCTCAGCCCTTGGG
CTTTGGGAGAGACACTGCTTCAAGCCCATCCCTTCTCAGTGCCCCCCCCACTTCCCCTGGGTTT
CACAGATCACAAAATTGAGCAGGATGGTGTGGTTTGGGGGACACCCCCTCCCACCTCACTGAGG
GTGTCCACGTGCTCCTGAGAGTCAGTTTAAAAGATCAGCTTAGATACCCACGGTTCACCAAGCT
GCCCCCTTCATCCCCGAGCTTTCAGCATCAGCTTCGGTGAACGTTTGCCCCGGGTCCAGCAGAA
TCCTGGCTGAAGTAGAGGCAGGTCTCAGCAAAAACCCGCTTTAGAGCAGAGGCAAGATATTCCT
AAGACGTTTTCACTGTTGGCCTGGATGTGGGTAGGTGGTGTCTCTGGAAGTAATGACAGGAGCC
GTAACAAACTCTCAATCTGTCTGTCTGAGATGAAGATGCCTTTTGAAAATAAAATTAAAGATCT
TTTAGAAGCAAATCAA

hide sequence

RefSeq Acc Id:

XM_006249507 ⟹ XP_006249569

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	12	43,003,487 - 43,027,321 (+)	NCBI
Rnor_6.0	12	48,772,821 - 48,796,582 (+)	NCBI
Rnor_5.0	12	50,531,209 - 50,584,406 (+)	NCBI

Sequence:

show sequence

GAACAAAACCTTGTGTATGCTTGTGTGCATGTGTGTACTCTTTTCTGAGACATGATCCTTCCCC
AGAAGGCAAGAATTGCAGGCTTGGACTGCCTGGTTTGGTTTATGAGGTGCTGCAGATAGGATCC
GGGGATTTGTGTGTGGCCAGCAAGCACTCTGACAGCTGAACCGCACCCCCAGCCCTGGGTCTGA
CTTACTGCCATCAAGTGAGGCCAAACCTCACGACACTGAGCCCGGTGACCCCCTTCTTCCCCAA
CATAAGGTGGCAGGCTTTCACCCCAGAGCTCTCTGACAATGACTCTTAAGAGTCTTGAATTTTC
TTTGGTCCCCAGCCAGCATCTTGACCTCCGATGGCGGCAGGGCAGGGTGAAGGGGCCATTTCCT
TGGCCCAACCCCTCCCAGGTTAAAGCGTGGGCCTTCGCCTTGGAAGAGGCAACAGATTGGCGGT
GGTGTGGACAGTTGGGGGCGGGAGGGGCAGACTGCCCCGTCCTTCCTCCCCAGAGCCTGGGAAC
AGGGTGGGACCTCACACTCCGCCATCCTGGCAGCATCGACAGCCCATTCATCACTGCCTGGACC
GAGGCTATGGAATTCTCACGGGCTGGATTGTAGCTGGGTGCTTGGGTAGGTCAGCACCCTGGTC
CTCCTCTCGAGTTTCCTTGGGCTGTATAGGTTCCTGCAGCCCTCTGCTCGCCTTGGAGCACATC
TGGAGATGGGTATTTCTAGCCGTGCACAGTGACTGATCAGCCGAGGACCTACCCTCGAGTTCTA
TTCTGCAACAGTGAACAGTGAAGGTCTCCAAAGAGATGGAGTACGAGGGTTACAACGACTCCAG
CATCTACGGTGAGGAGTATTCTGACGGCTCGGACTACATCGTGGACTTGGAGGAGGCGGGTCCA
CTGGAGGCCAAGGTGGCCGAGGTCTTCCTGGTGGTAATCTACAGCTTGGTGTGCTTCCTCGGGA
TCCTAGGCAATGGCCTGGTGATTGTCATCGCCACCTTCAAGATGAAGAAGACGGTGAACACCGT
GTGGTTTGTCAACCTGGCCGTGGCTGACTTCCTGTTCAACATCTTCTTGCCCATCCACATCACC
TATGCCGCTATGGACTACCACTGGGTGTTCGGGAAAGCCATGTGCAAGATTAGTAGCTTTCTGC
TAAGCCACAACATGTACACCAGCGTCTTCCTGCTCACTGTCATCAGCTTCGACCGCTGCATCTC
CGTGCTCCTCCCCGTCTGGTCCCAGAACCACCGCAGCGTGCGTCTGGCCTACATGACCTGCGTG
GTTGTCTGGGTCCTGGCTTTCTTCCTGAGTTCCCCGTCCCTCGTCTTCCGGGACACGGTCAGCA
CCAGCCACGGGAAGATAACCTGCTTCAACAACTTCAGCCTGGCCGCGCCCGAGCCTTTCTCTCA
TTCCACCCACCCGCGAACAGACCCGGTAGGGTACAGCAGACATGTGGCGGTCACCGTCACCCGC
TTCCTCTGTGGCTTCCTGATCCCCGTCTTCATCATCACGGCCTGTTACCTCACCATCGTCTTCA
AGTTGCAGCGCAACCGCCTGGCCAAGACCAAGAAGCCCTTCAAGATCATCATCACCATCATCAT
CACCTTCTTCCTCTGCTGGTGCCCCTACCACACACTCTACCTGCTGGAGCTCCACCACACGGCT
GTGCCAGCCTCTGTCTTCAGCCTGGGACTGCCCCTGGCCACAGCCGTTGCCATCGCCAACAGCT
GTATGAACCCCATCCTGTACGTCTTCATGGGCCACGACTTCAAAAAATTCAAGGTGGCCCTTTT
CTCCCGCCTGGTGAATGCCCTGAGCGAGGACACAGGACCCTCCTCCTACCCCAGTCACAGGAGC
TTCACCAAGATGTCCTCATTGATTGAGAAGGCTTCAGTGAATGAGAAAGAGACCAGCACCCTCT
GAGCCTTCCCTGGGACTGTCCCCAATGGGCTCCACAGCCCAGGGACTTGTCTCCTGAGGTAGGA
GACACGCCTGGAGCCTTTGGGTATGCCCCAGCGCCCGCTACGTCTTGCGCAAGGCGGCCCATTG
TTTTGGGTGGAGTTCCCAAGTGTGGACACTCTTCCAGCAAAATGGCAGACAAGCAACCTGAGCC
CCTGCAGCAGGAGTATAGGACCAACTTCCACCGGCTCAGAAAAGGGAGGGTCTCTGAAACCAAG
GTCTGAGCTGTGACCCACATACAGGCACACAATTTCACTGTGGATGCCCCAAACATGCTGCACA
GTCTCCAGTGTGGGTGAGGACGTCACTGCAGACCTGTTATGGCGACATGACAGTCAAACCAGCA
AATACCCCACCACCACTGTCATCCTCCAAGATCTTGACTTTGGATTTCAGAAAAATGGGGAGGA
CCAGGACCTGAGGGGCTTCATAGAACTTGCTTGCAAGGGCAGCCCAGGTGTGTGTGTGTGTATG
TGCTTGTGTGTGTGTGTGTGTGTATGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TTGAAGAGGTGGAGACAGAGAGCAGAGAACCCCAAAGGATGTGGGTACAGGATATCTCACACCA
TCATGCCACAGGGAGACAGAGCTACAACGATGGGTGCTTGGGGGTTCAGATGGTGGCAGCTCTT
TGCTTCAGTGTGTATACCCCCCTAGCACTGTACCCCCAGGCTGGAGGGGGGCTCTTCACAGAAG
CTTCCAACCCATTCCAGCACTGGCTGGAAGGGCTTGGGATGTCCCTGGAGACTGGTCTGGGACT
ATCTTCAAAGCGTCTTCCAAAGGCTGCTGCTGACCAGCTCACCTGACTCCTCCTTGAACACACT
CCCCACGTGGGGCATCACAGCCCCGATGGCAGCCCAGGATCAGGCCTCCCTCCCTTGACAGGGA
AATGACTCACCCAACCCCATGCACTGTCAGTAACAAAGACCCAGGCCCAGCTCCACCTGGCTGA
TGTCATTCCCTCCCTGGGGATGGGGTCGCTTGCATTTATTTAACATGTCCCACACCATGTTAAG
CACTTCACACGTTATCTTCTCATTTATTCTTCACGGAAACCTGGGGTAGGTCCTCGTGCATGTG
AGGAAGCAGAGGCTCAGAGAGGTTAAGCAACTGGCCCAAGGGGGCCCAGCTAGGTGTTGGCAGA
GACCGGATTAGAACCCCAGTTCTCCTGGCTGAAAGGAAGATGGAGAGTCAGCGGTGGGGGAAGC
TAATGGGTTTGGGGTTTTAGCCACAAATACAGGTTTTTCAGTGGATCCACGTGGACACCTTAAT
AGCCTTTACGAGGTTTTGCATGTTGTTTTCAGAGCAATCCAACATTCGAAGAAAAGGCTGTCTC
CAGCCTCAGCCCCCATGGGTCCCATCACGCACACCCTGAAATCTGCTGAGTGAGCATAGGAGGA
GCCTGGCAGGTCAGCCTCTCTGGTCCAAGGCCTTCTGGCCCCTGCAGTGTCCTCTGTTCTCCTC
CAAGCCACTTCTCCACCGGGGCAAAACACACAGACATGCGTCCTCTGGCCTGGCCAGTTCCCGA
ATTTTAGATTGCTGGGAGTCACACCTCATCAGGGGACAGACTGTTCCTCCCCGGTTGGGTCTTA
CGATGAGGCAGTTCCAAACTGATCCAAGCTGGAACCTCTGGCTTCTCGGAGAGCGGAATGTACA
GGGGAGGTTTAGTACAGGGGAGGTTTAAAAATAGCCTCGTGTTCCCATTGTCCCGCCCCTACCC
TCCCAGGGCTACACATGTGCAACCAAGGCATGCCAGGGTCTGGGATTCATCATATCAACAGAGA
TGCCTGTCCGTGACCAGGCCACATGGCCCCTTGGACAGTGCACTTCCTGGAGGGCTGGCCAGGC
CAGGCAGGGGACCAGCAAATCTTTTGCCATTGGAAAAACTGACCAGCAGGAGTGTTACGCCAGT
CCATGTCAACCCCCTAGAGCCCACCCTCTTCCTCTTCCTCCTGGCTGTCATAACACCCCTGTGC
TGACTTCAGTTCACGCCAAGTGCTAAGTGAAACCTTCAGCCTTGTCCTCACGGACTTCTCACAG
CCTAACTGCCCCCGATCCCCCGTCTCCCAGGACTTACATATAATCCCTGCAGCTGGCAAAGTGC
TGTGGCCCTCTATGTCCCCCTAAAGACCAACAGGGCCAGCAGCGCCTTCTCTGGAGCTGGGACC
CAGCAGATGGCCTCACGGGCTGCCCCCCGGGTGGGTGATGAGCGGTGGGACCAAGACAAGGTGT
GGAGGGACAAGAAGGGGAGACCGCTGGAGTGTGGGGGAGGGGAGCGGAGTGTGCTTCTGAGCAT
CCAGATGCCAAGGAGCACTGTAGTCTGTGCTTGGACCCCGGGGAGGACGATGCTGTGTCCCTGT
GTGGCATGCAGAAACTTAAGTAAGGGCCACACGGCTAGGAAGTAATGTGGGGCTTCAGGGCTTG
GAACTGACATTACCTTTGTCAGCCTATGGAAACAGGATGGGGAGGGAGGAGGGAGGACAGAAGG
GAAGACAGAAAGGAGGGAGGGAGAACAGGCAATGGAGTAAAGCCGCCCCACCTTGGAATCCCCA
TCTCTGTTGAGCCATCCAGGTTCTCTTTGAAACATCATCTCCAGGGACTCCCTGTCAAAAGAGT
GACCTTGGGTCTGTGTTTTTTGAGGTCCCTCATGGGGAGGGTCAGACTTCTCCAAGGCCAGGGA
TGTGCCCTAGGGAAAGACTGGTGCTGCCTGGGGAGAGTGGGCTGGTGTTGAGTGGGTGGAAGGT
CCAGGAGGGCTCCAGGTGGACCTGCAGGGGTGGCAGGCCAGGACTCCTGGGGAGGGAGAGAGCC
ATGTGGGAGCCCTGAGGGCTGGGCTGCAGGGAGCAGGGAACGGGAGGTGGACAGAAGACCAGGG
CTGGGGAGACACTGTGCAGACTGATCTGCTCAGACCTGCTTGTTGAGTCTGCTGTGGAGAGCAC
TGGGAGGAGGAAGCCAGGAGGCTACAGCATTGAGCAGCAGGAGCCCCAGAGGCCTCCAGACTGG
GAGAGCTGGAGAGAGCAGAGGGCTCGGTATTTAAAAGCTCTGAGCTTTCTCAGGGGAGCGGTTA
GCAGGAAGCCAACGCTGGGCCCATCTGTGCAGCACAGAGGTCCTGCTGCATTAGTCTGTTGATG
GAAATTAATTGTAAATATTATTCAAACGTACCTCCCAGTGCACAATTATACTTCTCAGGGGAGT
TCTCTGAGTACATCGGGAAACTCTGTAAATAATACATACATTAGCCCAGGCGTGCTAATGCTGT
GTCGAGGTTGTGGCTGCCAGAATCACTCCAAGTGTTTGTGCAGGGGGTTAGCCTTGGACACCCA
GACGTGTCTCCTCCAGAGGATGGGGGCAACCCTAGGCATGCCACCCAACTCCTGGCCTAGATGC
CTGGTCACTGGGCAGGTGGGGACACAGAGCTGGAGAGAGAGGAAGACACACAGGTCCAGAGAAT
GCCCCGCTGTGCTGAAGAGGTTCAGTGGCTGCTGCACTAAAAATGTGGCCTGGCTGTGCTCAGG
CTTGGGGCAAGCACTTAGGGAGTCCTTTTTGATAAGACCCAGCGCCACGCCTATAGATGGATGA
AGAGATGGAGAGATTCATAAAGGTGAGGGGTTTGCATAAGGTCATATAGTCAGTGAGAGCCCTG
TCGTCTGGTTGTCTGTCTGTTAGAAAGTTCTTGCTTTCCCAAGAAGTTAGTCAGTCTCTGTCCT
CCACCCCCAACCCCCACTCCCAACTCCTGCAAGTCCAAGGACTGCGTTGTCCTTGGAGGGGAAG
GGTATGGCATTTACAGGGTTTGCCAGTCAGTTCCTCTCAGCCCTTGGGCTTTGGGAGAGACACT
GCTTCAAGCCCATCCCTTCTCAGTGCCCCCCCCACTTCCCCTGGGTTTCACAGATCACAAAATT
GAGCAGGATGGTGTGGTTTGGGGGACACCCCCTCCCACCTCACTGAGGGTGTCCACGTGCTCCT
GAGAGTCAGTTTAAAAGATCAGCTTAGATACCCACGGTTCACCAAGCTGCCCCCTTCATCCCCG
AGCTTTCAGCATCAGCTTCGGTGAACGTTTGCCCCGGGTCCAGCAGAATCCTGGCTGAAGTAGA
GGCAGGTCTCAGCAAAAACCCGCTTTAGAGCAGAGGCAAGATATTCCTAAGACGTTTTCACTGT
TGGCCTGGATGTGGGTAGGTGGTGTCTCTGGAAGTAATGACAGGAGCCGTAACAAACTCTCAAT
CTGTCTGTCTGAGATGAAGATGCCTTTTGAAAATAAAATTAAAGATCTTTTAGAAGCAAATCAA

hide sequence

RefSeq Acc Id:

XM_006249508 ⟹ XP_006249570

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	12	42,984,946 - 43,027,321 (+)	NCBI
Rnor_6.0	12	48,754,214 - 48,796,582 (+)	NCBI
Rnor_5.0	12	50,531,209 - 50,584,406 (+)	NCBI

Sequence:

show sequence

CCTGGCTGCCAGGCACAGCCTCCTCTAGTGGCCCCCACCCCACACAGCTGGCGCCCCCGCCCTC
CCCAGGCTGCTTCCTGCTCCTCCCTCCTCTCCCCGCTCCAGCTGTTTCTCAGGCTGAGTTCTGT
AACACGGACAGAGCGGGGCTCTTAGGATGTTGCTGGAGGTTGTGCTCCGCGGGGCTCAGACGAA
ATCTGTGAATGGAAGAAATGCTTTCAAGCAAACAGCCGCTACCAGAACAACTCTGTGACTAGGA
GAAAGAGGCCAAGGCGCGAGTTCCCAAACCCTGAAGCCACAGGAGCCCAAGGGGGAGACTGGAG
AGAAGGTATTTCTAGCCGTGCACAGTGACTGATCAGCCGAGGACCTACCCTCGAGTTCTATTCT
GCAACAGTGAACAGTGAAGGTCTCCAAAGAGATGGAGTACGAGGGTTACAACGACTCCAGCATC
TACGGTGAGGAGTATTCTGACGGCTCGGACTACATCGTGGACTTGGAGGAGGCGGGTCCACTGG
AGGCCAAGGTGGCCGAGGTCTTCCTGGTGGTAATCTACAGCTTGGTGTGCTTCCTCGGGATCCT
AGGCAATGGCCTGGTGATTGTCATCGCCACCTTCAAGATGAAGAAGACGGTGAACACCGTGTGG
TTTGTCAACCTGGCCGTGGCTGACTTCCTGTTCAACATCTTCTTGCCCATCCACATCACCTATG
CCGCTATGGACTACCACTGGGTGTTCGGGAAAGCCATGTGCAAGATTAGTAGCTTTCTGCTAAG
CCACAACATGTACACCAGCGTCTTCCTGCTCACTGTCATCAGCTTCGACCGCTGCATCTCCGTG
CTCCTCCCCGTCTGGTCCCAGAACCACCGCAGCGTGCGTCTGGCCTACATGACCTGCGTGGTTG
TCTGGGTCCTGGCTTTCTTCCTGAGTTCCCCGTCCCTCGTCTTCCGGGACACGGTCAGCACCAG
CCACGGGAAGATAACCTGCTTCAACAACTTCAGCCTGGCCGCGCCCGAGCCTTTCTCTCATTCC
ACCCACCCGCGAACAGACCCGGTAGGGTACAGCAGACATGTGGCGGTCACCGTCACCCGCTTCC
TCTGTGGCTTCCTGATCCCCGTCTTCATCATCACGGCCTGTTACCTCACCATCGTCTTCAAGTT
GCAGCGCAACCGCCTGGCCAAGACCAAGAAGCCCTTCAAGATCATCATCACCATCATCATCACC
TTCTTCCTCTGCTGGTGCCCCTACCACACACTCTACCTGCTGGAGCTCCACCACACGGCTGTGC
CAGCCTCTGTCTTCAGCCTGGGACTGCCCCTGGCCACAGCCGTTGCCATCGCCAACAGCTGTAT
GAACCCCATCCTGTACGTCTTCATGGGCCACGACTTCAAAAAATTCAAGGTGGCCCTTTTCTCC
CGCCTGGTGAATGCCCTGAGCGAGGACACAGGACCCTCCTCCTACCCCAGTCACAGGAGCTTCA
CCAAGATGTCCTCATTGATTGAGAAGGCTTCAGTGAATGAGAAAGAGACCAGCACCCTCTGAGC
CTTCCCTGGGACTGTCCCCAATGGGCTCCACAGCCCAGGGACTTGTCTCCTGAGGTAGGAGACA
CGCCTGGAGCCTTTGGGTATGCCCCAGCGCCCGCTACGTCTTGCGCAAGGCGGCCCATTGTTTT
GGGTGGAGTTCCCAAGTGTGGACACTCTTCCAGCAAAATGGCAGACAAGCAACCTGAGCCCCTG
CAGCAGGAGTATAGGACCAACTTCCACCGGCTCAGAAAAGGGAGGGTCTCTGAAACCAAGGTCT
GAGCTGTGACCCACATACAGGCACACAATTTCACTGTGGATGCCCCAAACATGCTGCACAGTCT
CCAGTGTGGGTGAGGACGTCACTGCAGACCTGTTATGGCGACATGACAGTCAAACCAGCAAATA
CCCCACCACCACTGTCATCCTCCAAGATCTTGACTTTGGATTTCAGAAAAATGGGGAGGACCAG
GACCTGAGGGGCTTCATAGAACTTGCTTGCAAGGGCAGCCCAGGTGTGTGTGTGTGTATGTGCT
TGTGTGTGTGTGTGTGTGTATGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGA
AGAGGTGGAGACAGAGAGCAGAGAACCCCAAAGGATGTGGGTACAGGATATCTCACACCATCAT
GCCACAGGGAGACAGAGCTACAACGATGGGTGCTTGGGGGTTCAGATGGTGGCAGCTCTTTGCT
TCAGTGTGTATACCCCCCTAGCACTGTACCCCCAGGCTGGAGGGGGGCTCTTCACAGAAGCTTC
CAACCCATTCCAGCACTGGCTGGAAGGGCTTGGGATGTCCCTGGAGACTGGTCTGGGACTATCT
TCAAAGCGTCTTCCAAAGGCTGCTGCTGACCAGCTCACCTGACTCCTCCTTGAACACACTCCCC
ACGTGGGGCATCACAGCCCCGATGGCAGCCCAGGATCAGGCCTCCCTCCCTTGACAGGGAAATG
ACTCACCCAACCCCATGCACTGTCAGTAACAAAGACCCAGGCCCAGCTCCACCTGGCTGATGTC
ATTCCCTCCCTGGGGATGGGGTCGCTTGCATTTATTTAACATGTCCCACACCATGTTAAGCACT
TCACACGTTATCTTCTCATTTATTCTTCACGGAAACCTGGGGTAGGTCCTCGTGCATGTGAGGA
AGCAGAGGCTCAGAGAGGTTAAGCAACTGGCCCAAGGGGGCCCAGCTAGGTGTTGGCAGAGACC
GGATTAGAACCCCAGTTCTCCTGGCTGAAAGGAAGATGGAGAGTCAGCGGTGGGGGAAGCTAAT
GGGTTTGGGGTTTTAGCCACAAATACAGGTTTTTCAGTGGATCCACGTGGACACCTTAATAGCC
TTTACGAGGTTTTGCATGTTGTTTTCAGAGCAATCCAACATTCGAAGAAAAGGCTGTCTCCAGC
CTCAGCCCCCATGGGTCCCATCACGCACACCCTGAAATCTGCTGAGTGAGCATAGGAGGAGCCT
GGCAGGTCAGCCTCTCTGGTCCAAGGCCTTCTGGCCCCTGCAGTGTCCTCTGTTCTCCTCCAAG
CCACTTCTCCACCGGGGCAAAACACACAGACATGCGTCCTCTGGCCTGGCCAGTTCCCGAATTT
TAGATTGCTGGGAGTCACACCTCATCAGGGGACAGACTGTTCCTCCCCGGTTGGGTCTTACGAT
GAGGCAGTTCCAAACTGATCCAAGCTGGAACCTCTGGCTTCTCGGAGAGCGGAATGTACAGGGG
AGGTTTAGTACAGGGGAGGTTTAAAAATAGCCTCGTGTTCCCATTGTCCCGCCCCTACCCTCCC
AGGGCTACACATGTGCAACCAAGGCATGCCAGGGTCTGGGATTCATCATATCAACAGAGATGCC
TGTCCGTGACCAGGCCACATGGCCCCTTGGACAGTGCACTTCCTGGAGGGCTGGCCAGGCCAGG
CAGGGGACCAGCAAATCTTTTGCCATTGGAAAAACTGACCAGCAGGAGTGTTACGCCAGTCCAT
GTCAACCCCCTAGAGCCCACCCTCTTCCTCTTCCTCCTGGCTGTCATAACACCCCTGTGCTGAC
TTCAGTTCACGCCAAGTGCTAAGTGAAACCTTCAGCCTTGTCCTCACGGACTTCTCACAGCCTA
ACTGCCCCCGATCCCCCGTCTCCCAGGACTTACATATAATCCCTGCAGCTGGCAAAGTGCTGTG
GCCCTCTATGTCCCCCTAAAGACCAACAGGGCCAGCAGCGCCTTCTCTGGAGCTGGGACCCAGC
AGATGGCCTCACGGGCTGCCCCCCGGGTGGGTGATGAGCGGTGGGACCAAGACAAGGTGTGGAG
GGACAAGAAGGGGAGACCGCTGGAGTGTGGGGGAGGGGAGCGGAGTGTGCTTCTGAGCATCCAG
ATGCCAAGGAGCACTGTAGTCTGTGCTTGGACCCCGGGGAGGACGATGCTGTGTCCCTGTGTGG
CATGCAGAAACTTAAGTAAGGGCCACACGGCTAGGAAGTAATGTGGGGCTTCAGGGCTTGGAAC
TGACATTACCTTTGTCAGCCTATGGAAACAGGATGGGGAGGGAGGAGGGAGGACAGAAGGGAAG
ACAGAAAGGAGGGAGGGAGAACAGGCAATGGAGTAAAGCCGCCCCACCTTGGAATCCCCATCTC
TGTTGAGCCATCCAGGTTCTCTTTGAAACATCATCTCCAGGGACTCCCTGTCAAAAGAGTGACC
TTGGGTCTGTGTTTTTTGAGGTCCCTCATGGGGAGGGTCAGACTTCTCCAAGGCCAGGGATGTG
CCCTAGGGAAAGACTGGTGCTGCCTGGGGAGAGTGGGCTGGTGTTGAGTGGGTGGAAGGTCCAG
GAGGGCTCCAGGTGGACCTGCAGGGGTGGCAGGCCAGGACTCCTGGGGAGGGAGAGAGCCATGT
GGGAGCCCTGAGGGCTGGGCTGCAGGGAGCAGGGAACGGGAGGTGGACAGAAGACCAGGGCTGG
GGAGACACTGTGCAGACTGATCTGCTCAGACCTGCTTGTTGAGTCTGCTGTGGAGAGCACTGGG
AGGAGGAAGCCAGGAGGCTACAGCATTGAGCAGCAGGAGCCCCAGAGGCCTCCAGACTGGGAGA
GCTGGAGAGAGCAGAGGGCTCGGTATTTAAAAGCTCTGAGCTTTCTCAGGGGAGCGGTTAGCAG
GAAGCCAACGCTGGGCCCATCTGTGCAGCACAGAGGTCCTGCTGCATTAGTCTGTTGATGGAAA
TTAATTGTAAATATTATTCAAACGTACCTCCCAGTGCACAATTATACTTCTCAGGGGAGTTCTC
TGAGTACATCGGGAAACTCTGTAAATAATACATACATTAGCCCAGGCGTGCTAATGCTGTGTCG
AGGTTGTGGCTGCCAGAATCACTCCAAGTGTTTGTGCAGGGGGTTAGCCTTGGACACCCAGACG
TGTCTCCTCCAGAGGATGGGGGCAACCCTAGGCATGCCACCCAACTCCTGGCCTAGATGCCTGG
TCACTGGGCAGGTGGGGACACAGAGCTGGAGAGAGAGGAAGACACACAGGTCCAGAGAATGCCC
CGCTGTGCTGAAGAGGTTCAGTGGCTGCTGCACTAAAAATGTGGCCTGGCTGTGCTCAGGCTTG
GGGCAAGCACTTAGGGAGTCCTTTTTGATAAGACCCAGCGCCACGCCTATAGATGGATGAAGAG
ATGGAGAGATTCATAAAGGTGAGGGGTTTGCATAAGGTCATATAGTCAGTGAGAGCCCTGTCGT
CTGGTTGTCTGTCTGTTAGAAAGTTCTTGCTTTCCCAAGAAGTTAGTCAGTCTCTGTCCTCCAC
CCCCAACCCCCACTCCCAACTCCTGCAAGTCCAAGGACTGCGTTGTCCTTGGAGGGGAAGGGTA
TGGCATTTACAGGGTTTGCCAGTCAGTTCCTCTCAGCCCTTGGGCTTTGGGAGAGACACTGCTT
CAAGCCCATCCCTTCTCAGTGCCCCCCCCACTTCCCCTGGGTTTCACAGATCACAAAATTGAGC
AGGATGGTGTGGTTTGGGGGACACCCCCTCCCACCTCACTGAGGGTGTCCACGTGCTCCTGAGA
GTCAGTTTAAAAGATCAGCTTAGATACCCACGGTTCACCAAGCTGCCCCCTTCATCCCCGAGCT
TTCAGCATCAGCTTCGGTGAACGTTTGCCCCGGGTCCAGCAGAATCCTGGCTGAAGTAGAGGCA
GGTCTCAGCAAAAACCCGCTTTAGAGCAGAGGCAAGATATTCCTAAGACGTTTTCACTGTTGGC
CTGGATGTGGGTAGGTGGTGTCTCTGGAAGTAATGACAGGAGCCGTAACAAACTCTCAATCTGT
CTGTCTGAGATGAAGATGCCTTTTGAAAATAAAATTAAAGATCTTTTAGAAGCAAATCAA

hide sequence

RefSeq Acc Id:

XM_006249509 ⟹ XP_006249571

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	12	42,974,462 - 43,027,321 (+)	NCBI
Rnor_6.0	12	48,743,556 - 48,796,582 (+)	NCBI
Rnor_5.0	12	50,531,209 - 50,584,406 (+)	NCBI

Sequence:

show sequence

TGCCTTGCTGTCCTGTTTGTAGACCGTCTCGCTGCACAATCCAGGTGGGCTTTCAACTTTGTGG
CCTCCTGTCTCAGCCTCCTGCAGGCAGGGAGCGCTGGTGTGCACGGCCAGGCCTGACTCGTGCT
GCCTTCTGGAGAAATCTGCTGTCAGTTGAGGGAATGAGCGACTTGTCAACATAGAGATTGGCTT
TCGGGGGCGTATGGCCATTGAAGGTATTTCTAGCCGTGCACAGTGACTGATCAGCCGAGGACCT
ACCCTCGAGTTCTATTCTGCAACAGTGAACAGTGAAGGTCTCCAAAGAGATGGAGTACGAGGGT
TACAACGACTCCAGCATCTACGGTGAGGAGTATTCTGACGGCTCGGACTACATCGTGGACTTGG
AGGAGGCGGGTCCACTGGAGGCCAAGGTGGCCGAGGTCTTCCTGGTGGTAATCTACAGCTTGGT
GTGCTTCCTCGGGATCCTAGGCAATGGCCTGGTGATTGTCATCGCCACCTTCAAGATGAAGAAG
ACGGTGAACACCGTGTGGTTTGTCAACCTGGCCGTGGCTGACTTCCTGTTCAACATCTTCTTGC
CCATCCACATCACCTATGCCGCTATGGACTACCACTGGGTGTTCGGGAAAGCCATGTGCAAGAT
TAGTAGCTTTCTGCTAAGCCACAACATGTACACCAGCGTCTTCCTGCTCACTGTCATCAGCTTC
GACCGCTGCATCTCCGTGCTCCTCCCCGTCTGGTCCCAGAACCACCGCAGCGTGCGTCTGGCCT
ACATGACCTGCGTGGTTGTCTGGGTCCTGGCTTTCTTCCTGAGTTCCCCGTCCCTCGTCTTCCG
GGACACGGTCAGCACCAGCCACGGGAAGATAACCTGCTTCAACAACTTCAGCCTGGCCGCGCCC
GAGCCTTTCTCTCATTCCACCCACCCGCGAACAGACCCGGTAGGGTACAGCAGACATGTGGCGG
TCACCGTCACCCGCTTCCTCTGTGGCTTCCTGATCCCCGTCTTCATCATCACGGCCTGTTACCT
CACCATCGTCTTCAAGTTGCAGCGCAACCGCCTGGCCAAGACCAAGAAGCCCTTCAAGATCATC
ATCACCATCATCATCACCTTCTTCCTCTGCTGGTGCCCCTACCACACACTCTACCTGCTGGAGC
TCCACCACACGGCTGTGCCAGCCTCTGTCTTCAGCCTGGGACTGCCCCTGGCCACAGCCGTTGC
CATCGCCAACAGCTGTATGAACCCCATCCTGTACGTCTTCATGGGCCACGACTTCAAAAAATTC
AAGGTGGCCCTTTTCTCCCGCCTGGTGAATGCCCTGAGCGAGGACACAGGACCCTCCTCCTACC
CCAGTCACAGGAGCTTCACCAAGATGTCCTCATTGATTGAGAAGGCTTCAGTGAATGAGAAAGA
GACCAGCACCCTCTGAGCCTTCCCTGGGACTGTCCCCAATGGGCTCCACAGCCCAGGGACTTGT
CTCCTGAGGTAGGAGACACGCCTGGAGCCTTTGGGTATGCCCCAGCGCCCGCTACGTCTTGCGC
AAGGCGGCCCATTGTTTTGGGTGGAGTTCCCAAGTGTGGACACTCTTCCAGCAAAATGGCAGAC
AAGCAACCTGAGCCCCTGCAGCAGGAGTATAGGACCAACTTCCACCGGCTCAGAAAAGGGAGGG
TCTCTGAAACCAAGGTCTGAGCTGTGACCCACATACAGGCACACAATTTCACTGTGGATGCCCC
AAACATGCTGCACAGTCTCCAGTGTGGGTGAGGACGTCACTGCAGACCTGTTATGGCGACATGA
CAGTCAAACCAGCAAATACCCCACCACCACTGTCATCCTCCAAGATCTTGACTTTGGATTTCAG
AAAAATGGGGAGGACCAGGACCTGAGGGGCTTCATAGAACTTGCTTGCAAGGGCAGCCCAGGTG
TGTGTGTGTGTATGTGCTTGTGTGTGTGTGTGTGTGTATGTGCATGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTTGAAGAGGTGGAGACAGAGAGCAGAGAACCCCAAAGGATGTGGGTACAG
GATATCTCACACCATCATGCCACAGGGAGACAGAGCTACAACGATGGGTGCTTGGGGGTTCAGA
TGGTGGCAGCTCTTTGCTTCAGTGTGTATACCCCCCTAGCACTGTACCCCCAGGCTGGAGGGGG
GCTCTTCACAGAAGCTTCCAACCCATTCCAGCACTGGCTGGAAGGGCTTGGGATGTCCCTGGAG
ACTGGTCTGGGACTATCTTCAAAGCGTCTTCCAAAGGCTGCTGCTGACCAGCTCACCTGACTCC
TCCTTGAACACACTCCCCACGTGGGGCATCACAGCCCCGATGGCAGCCCAGGATCAGGCCTCCC
TCCCTTGACAGGGAAATGACTCACCCAACCCCATGCACTGTCAGTAACAAAGACCCAGGCCCAG
CTCCACCTGGCTGATGTCATTCCCTCCCTGGGGATGGGGTCGCTTGCATTTATTTAACATGTCC
CACACCATGTTAAGCACTTCACACGTTATCTTCTCATTTATTCTTCACGGAAACCTGGGGTAGG
TCCTCGTGCATGTGAGGAAGCAGAGGCTCAGAGAGGTTAAGCAACTGGCCCAAGGGGGCCCAGC
TAGGTGTTGGCAGAGACCGGATTAGAACCCCAGTTCTCCTGGCTGAAAGGAAGATGGAGAGTCA
GCGGTGGGGGAAGCTAATGGGTTTGGGGTTTTAGCCACAAATACAGGTTTTTCAGTGGATCCAC
GTGGACACCTTAATAGCCTTTACGAGGTTTTGCATGTTGTTTTCAGAGCAATCCAACATTCGAA
GAAAAGGCTGTCTCCAGCCTCAGCCCCCATGGGTCCCATCACGCACACCCTGAAATCTGCTGAG
TGAGCATAGGAGGAGCCTGGCAGGTCAGCCTCTCTGGTCCAAGGCCTTCTGGCCCCTGCAGTGT
CCTCTGTTCTCCTCCAAGCCACTTCTCCACCGGGGCAAAACACACAGACATGCGTCCTCTGGCC
TGGCCAGTTCCCGAATTTTAGATTGCTGGGAGTCACACCTCATCAGGGGACAGACTGTTCCTCC
CCGGTTGGGTCTTACGATGAGGCAGTTCCAAACTGATCCAAGCTGGAACCTCTGGCTTCTCGGA
GAGCGGAATGTACAGGGGAGGTTTAGTACAGGGGAGGTTTAAAAATAGCCTCGTGTTCCCATTG
TCCCGCCCCTACCCTCCCAGGGCTACACATGTGCAACCAAGGCATGCCAGGGTCTGGGATTCAT
CATATCAACAGAGATGCCTGTCCGTGACCAGGCCACATGGCCCCTTGGACAGTGCACTTCCTGG
AGGGCTGGCCAGGCCAGGCAGGGGACCAGCAAATCTTTTGCCATTGGAAAAACTGACCAGCAGG
AGTGTTACGCCAGTCCATGTCAACCCCCTAGAGCCCACCCTCTTCCTCTTCCTCCTGGCTGTCA
TAACACCCCTGTGCTGACTTCAGTTCACGCCAAGTGCTAAGTGAAACCTTCAGCCTTGTCCTCA
CGGACTTCTCACAGCCTAACTGCCCCCGATCCCCCGTCTCCCAGGACTTACATATAATCCCTGC
AGCTGGCAAAGTGCTGTGGCCCTCTATGTCCCCCTAAAGACCAACAGGGCCAGCAGCGCCTTCT
CTGGAGCTGGGACCCAGCAGATGGCCTCACGGGCTGCCCCCCGGGTGGGTGATGAGCGGTGGGA
CCAAGACAAGGTGTGGAGGGACAAGAAGGGGAGACCGCTGGAGTGTGGGGGAGGGGAGCGGAGT
GTGCTTCTGAGCATCCAGATGCCAAGGAGCACTGTAGTCTGTGCTTGGACCCCGGGGAGGACGA
TGCTGTGTCCCTGTGTGGCATGCAGAAACTTAAGTAAGGGCCACACGGCTAGGAAGTAATGTGG
GGCTTCAGGGCTTGGAACTGACATTACCTTTGTCAGCCTATGGAAACAGGATGGGGAGGGAGGA
GGGAGGACAGAAGGGAAGACAGAAAGGAGGGAGGGAGAACAGGCAATGGAGTAAAGCCGCCCCA
CCTTGGAATCCCCATCTCTGTTGAGCCATCCAGGTTCTCTTTGAAACATCATCTCCAGGGACTC
CCTGTCAAAAGAGTGACCTTGGGTCTGTGTTTTTTGAGGTCCCTCATGGGGAGGGTCAGACTTC
TCCAAGGCCAGGGATGTGCCCTAGGGAAAGACTGGTGCTGCCTGGGGAGAGTGGGCTGGTGTTG
AGTGGGTGGAAGGTCCAGGAGGGCTCCAGGTGGACCTGCAGGGGTGGCAGGCCAGGACTCCTGG
GGAGGGAGAGAGCCATGTGGGAGCCCTGAGGGCTGGGCTGCAGGGAGCAGGGAACGGGAGGTGG
ACAGAAGACCAGGGCTGGGGAGACACTGTGCAGACTGATCTGCTCAGACCTGCTTGTTGAGTCT
GCTGTGGAGAGCACTGGGAGGAGGAAGCCAGGAGGCTACAGCATTGAGCAGCAGGAGCCCCAGA
GGCCTCCAGACTGGGAGAGCTGGAGAGAGCAGAGGGCTCGGTATTTAAAAGCTCTGAGCTTTCT
CAGGGGAGCGGTTAGCAGGAAGCCAACGCTGGGCCCATCTGTGCAGCACAGAGGTCCTGCTGCA
TTAGTCTGTTGATGGAAATTAATTGTAAATATTATTCAAACGTACCTCCCAGTGCACAATTATA
CTTCTCAGGGGAGTTCTCTGAGTACATCGGGAAACTCTGTAAATAATACATACATTAGCCCAGG
CGTGCTAATGCTGTGTCGAGGTTGTGGCTGCCAGAATCACTCCAAGTGTTTGTGCAGGGGGTTA
GCCTTGGACACCCAGACGTGTCTCCTCCAGAGGATGGGGGCAACCCTAGGCATGCCACCCAACT
CCTGGCCTAGATGCCTGGTCACTGGGCAGGTGGGGACACAGAGCTGGAGAGAGAGGAAGACACA
CAGGTCCAGAGAATGCCCCGCTGTGCTGAAGAGGTTCAGTGGCTGCTGCACTAAAAATGTGGCC
TGGCTGTGCTCAGGCTTGGGGCAAGCACTTAGGGAGTCCTTTTTGATAAGACCCAGCGCCACGC
CTATAGATGGATGAAGAGATGGAGAGATTCATAAAGGTGAGGGGTTTGCATAAGGTCATATAGT
CAGTGAGAGCCCTGTCGTCTGGTTGTCTGTCTGTTAGAAAGTTCTTGCTTTCCCAAGAAGTTAG
TCAGTCTCTGTCCTCCACCCCCAACCCCCACTCCCAACTCCTGCAAGTCCAAGGACTGCGTTGT
CCTTGGAGGGGAAGGGTATGGCATTTACAGGGTTTGCCAGTCAGTTCCTCTCAGCCCTTGGGCT
TTGGGAGAGACACTGCTTCAAGCCCATCCCTTCTCAGTGCCCCCCCCACTTCCCCTGGGTTTCA
CAGATCACAAAATTGAGCAGGATGGTGTGGTTTGGGGGACACCCCCTCCCACCTCACTGAGGGT
GTCCACGTGCTCCTGAGAGTCAGTTTAAAAGATCAGCTTAGATACCCACGGTTCACCAAGCTGC
CCCCTTCATCCCCGAGCTTTCAGCATCAGCTTCGGTGAACGTTTGCCCCGGGTCCAGCAGAATC
CTGGCTGAAGTAGAGGCAGGTCTCAGCAAAAACCCGCTTTAGAGCAGAGGCAAGATATTCCTAA
GACGTTTTCACTGTTGGCCTGGATGTGGGTAGGTGGTGTCTCTGGAAGTAATGACAGGAGCCGT
AACAAACTCTCAATCTGTCTGTCTGAGATGAAGATGCCTTTTGAAAATAAAATTAAAGATCTTT
TAGAAGCAAATCAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_071554	(Get FASTA)	NCBI Sequence Viewer
	XP_006249567	(Get FASTA)	NCBI Sequence Viewer
	XP_006249568	(Get FASTA)	NCBI Sequence Viewer
	XP_006249569	(Get FASTA)	NCBI Sequence Viewer
	XP_006249570	(Get FASTA)	NCBI Sequence Viewer
	XP_006249571	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	CAA05715	(Get FASTA)	NCBI Sequence Viewer
	EDM13970	(Get FASTA)	NCBI Sequence Viewer
	EDM13971	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000000893
	ENSRNOP00000085339
	ENSRNOP00000089521
	ENSRNOP00000091942
GenBank Protein	O35786	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_071554 ⟸ NM_022218

- UniProtKB:

O35786 (UniProtKB/Swiss-Prot), G3V625 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEYEGYNDSSIYGEEYSDGSDYIVDLEEAGPLEAKVAEVFLVVIYSLVCFLGILGNGLVIVIAT
FKMKKTVNTVWFVNLAVADFLFNIFLPIHITYAAMDYHWVFGKAMCKISSFLLSHNMYTSVFLL
TVISFDRCISVLLPVWSQNHRSVRLAYMTCVVVWVLAFFLSSPSLVFRDTVSTSHGKITCFNNF
SLAAPEPFSHSTHPRTDPVGYSRHVAVTVTRFLCGFLIPVFIITACYLTIVFKLQRNRLAKTKK
PFKIIITIIITFFLCWCPYHTLYLLELHHTAVPASVFSLGLPLATAVAIANSCMNPILYVFMGH
DFKKFKVALFSRLVNALSEDTGPSSYPSHRSFTKMSSLIEKASVNEKETSTL

hide sequence

RefSeq Acc Id:	XP_006249571 ⟸ XM_006249509
- Peptide Label:	isoform X1
- UniProtKB:	O35786 (UniProtKB/Swiss-Prot), G3V625 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEYEGYNDSSIYGEEYSDGSDYIVDLEEAGPLEAKVAEVFLVVIYSLVCFLGILGNGLVIVIAT FKMKKTVNTVWFVNLAVADFLFNIFLPIHITYAAMDYHWVFGKAMCKISSFLLSHNMYTSVFLL TVISFDRCISVLLPVWSQNHRSVRLAYMTCVVVWVLAFFLSSPSLVFRDTVSTSHGKITCFNNF SLAAPEPFSHSTHPRTDPVGYSRHVAVTVTRFLCGFLIPVFIITACYLTIVFKLQRNRLAKTKK PFKIIITIIITFFLCWCPYHTLYLLELHHTAVPASVFSLGLPLATAVAIANSCMNPILYVFMGH DFKKFKVALFSRLVNALSEDTGPSSYPSHRSFTKMSSLIEKASVNEKETSTL hide sequence

RefSeq Acc Id:	XP_006249570 ⟸ XM_006249508
- Peptide Label:	isoform X1
- UniProtKB:	O35786 (UniProtKB/Swiss-Prot), G3V625 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEYEGYNDSSIYGEEYSDGSDYIVDLEEAGPLEAKVAEVFLVVIYSLVCFLGILGNGLVIVIAT FKMKKTVNTVWFVNLAVADFLFNIFLPIHITYAAMDYHWVFGKAMCKISSFLLSHNMYTSVFLL TVISFDRCISVLLPVWSQNHRSVRLAYMTCVVVWVLAFFLSSPSLVFRDTVSTSHGKITCFNNF SLAAPEPFSHSTHPRTDPVGYSRHVAVTVTRFLCGFLIPVFIITACYLTIVFKLQRNRLAKTKK PFKIIITIIITFFLCWCPYHTLYLLELHHTAVPASVFSLGLPLATAVAIANSCMNPILYVFMGH DFKKFKVALFSRLVNALSEDTGPSSYPSHRSFTKMSSLIEKASVNEKETSTL hide sequence

RefSeq Acc Id:	XP_006249569 ⟸ XM_006249507
- Peptide Label:	isoform X1
- UniProtKB:	O35786 (UniProtKB/Swiss-Prot), G3V625 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEYEGYNDSSIYGEEYSDGSDYIVDLEEAGPLEAKVAEVFLVVIYSLVCFLGILGNGLVIVIAT FKMKKTVNTVWFVNLAVADFLFNIFLPIHITYAAMDYHWVFGKAMCKISSFLLSHNMYTSVFLL TVISFDRCISVLLPVWSQNHRSVRLAYMTCVVVWVLAFFLSSPSLVFRDTVSTSHGKITCFNNF SLAAPEPFSHSTHPRTDPVGYSRHVAVTVTRFLCGFLIPVFIITACYLTIVFKLQRNRLAKTKK PFKIIITIIITFFLCWCPYHTLYLLELHHTAVPASVFSLGLPLATAVAIANSCMNPILYVFMGH DFKKFKVALFSRLVNALSEDTGPSSYPSHRSFTKMSSLIEKASVNEKETSTL hide sequence

RefSeq Acc Id:	XP_006249567 ⟸ XM_006249505
- Peptide Label:	isoform X1
- UniProtKB:	O35786 (UniProtKB/Swiss-Prot), G3V625 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEYEGYNDSSIYGEEYSDGSDYIVDLEEAGPLEAKVAEVFLVVIYSLVCFLGILGNGLVIVIAT FKMKKTVNTVWFVNLAVADFLFNIFLPIHITYAAMDYHWVFGKAMCKISSFLLSHNMYTSVFLL TVISFDRCISVLLPVWSQNHRSVRLAYMTCVVVWVLAFFLSSPSLVFRDTVSTSHGKITCFNNF SLAAPEPFSHSTHPRTDPVGYSRHVAVTVTRFLCGFLIPVFIITACYLTIVFKLQRNRLAKTKK PFKIIITIIITFFLCWCPYHTLYLLELHHTAVPASVFSLGLPLATAVAIANSCMNPILYVFMGH DFKKFKVALFSRLVNALSEDTGPSSYPSHRSFTKMSSLIEKASVNEKETSTL hide sequence

RefSeq Acc Id:	XP_006249568 ⟸ XM_006249506
- Peptide Label:	isoform X1
- UniProtKB:	O35786 (UniProtKB/Swiss-Prot), G3V625 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEYEGYNDSSIYGEEYSDGSDYIVDLEEAGPLEAKVAEVFLVVIYSLVCFLGILGNGLVIVIAT FKMKKTVNTVWFVNLAVADFLFNIFLPIHITYAAMDYHWVFGKAMCKISSFLLSHNMYTSVFLL TVISFDRCISVLLPVWSQNHRSVRLAYMTCVVVWVLAFFLSSPSLVFRDTVSTSHGKITCFNNF SLAAPEPFSHSTHPRTDPVGYSRHVAVTVTRFLCGFLIPVFIITACYLTIVFKLQRNRLAKTKK PFKIIITIIITFFLCWCPYHTLYLLELHHTAVPASVFSLGLPLATAVAIANSCMNPILYVFMGH DFKKFKVALFSRLVNALSEDTGPSSYPSHRSFTKMSSLIEKASVNEKETSTL hide sequence

RefSeq Acc Id:

ENSRNOP00000000893 ⟸ ENSRNOT00000000893

RefSeq Acc Id:

ENSRNOP00000089521 ⟸ ENSRNOT00000097365

RefSeq Acc Id:

ENSRNOP00000085339 ⟸ ENSRNOT00000101222

RefSeq Acc Id:

ENSRNOP00000091942 ⟸ ENSRNOT00000105285

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-O35786-F1-model_v2	AlphaFold	O35786	1-372	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:69359	AgrOrtholog
BioCyc Gene	G2FUF-18915	BioCyc
Ensembl Genes	ENSRNOG00000000704	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000000893	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOT00000097365	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOT00000101222	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOT00000105285	ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/Swiss-Prot
InterPro	Chemokine-like_recpt_1	UniProtKB/Swiss-Prot
	Formyl_rcpt-rel	UniProtKB/Swiss-Prot
	GPCR_Rhodpsn	UniProtKB/Swiss-Prot
	GPCR_Rhodpsn_7TM	UniProtKB/Swiss-Prot
KEGG Report	rno:60669	UniProtKB/Swiss-Prot
NCBI Gene	60669	ENTREZGENE
PANTHER	PTHR24225	UniProtKB/Swiss-Prot
	PTHR24225:SF49	UniProtKB/Swiss-Prot
Pfam	7tm_1	UniProtKB/Swiss-Prot
PhenoGen	Cmklr1	PhenoGen
PRINTS	DEZORPHANR	UniProtKB/Swiss-Prot
	GPCRRHODOPSN	UniProtKB/Swiss-Prot
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/Swiss-Prot
	G_PROTEIN_RECEP_F1_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000000704	RatGTEx
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/Swiss-Prot
UniProt	CML1_RAT	UniProtKB/Swiss-Prot
	G3V625	ENTREZGENE
	O35786	ENTREZGENE
UniProt Secondary	G3V625	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-04-15	Cmklr1	chemerin chemokine-like receptor 1	Cmklr1	chemokine-like receptor 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2002-06-10	Cmklr1	chemokine-like receptor 1			Name updated	70584	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expressed in heart and lung and at lower levels in small intestine, colon, kidney, liver, uterus, and brain	68788
gene_expression	expressed primarily in vascular cells in liver and kidney	68788

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD