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Gene: Cox6a1 (cytochrome c oxidase subunit 6A1) Rattus norvegicus
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Symbol: Cox6a1
Name: cytochrome c oxidase subunit 6A1
Description: Predicted to contribute to cytochrome-c oxidase activity. Predicted to be involved in mitochondrial electron transport, cytochrome c to oxygen. Predicted to localize to the mitochondrial respiratory chain complex IV. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease recessive intermediate D. Orthologous to several human genes including COX6A1 (cytochrome c oxidase subunit 6A1); PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: COX6AL; cytochrome c oxidase polypeptide VIa-liver; cytochrome c oxidase subunit 6A1, mitochondrial; Cytochrome c oxidase subunit VIa (liver); cytochrome c oxidase, subunit VIa, polypeptide 1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01247,024,442 - 47,027,495 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01248,817,758 - 48,820,811 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41242,530,091 - 42,533,144 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11242,393,577 - 42,396,520 (+)NCBI
Celera1242,883,040 - 42,886,093 (+)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cox6a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2384
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.