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Gene: Rph3a (rabphilin 3A) Rattus norvegicus
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Symbol: Rph3a
Name: rabphilin 3A
Description: Exhibits anion binding activity; metal ion binding activity; and selenium binding activity. Involved in brain development; dendritic spine organization; and regulation of NMDA receptor activity. Localizes to several cellular components, including the cholinergic synapse; cytoplasm; and dendritic spine. Colocalizes with the Golgi apparatus. Orthologous to human RPH3A (rabphilin 3A); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 6-propyl-2-thiouracil; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: exophilin-1; rabphilin 3A homolog; rabphilin 3A homolog (mouse); rabphilin-3A
Orthologs:
Homo sapiens (human) : RPH3A (rabphilin 3A)  HGNC  Alliance
Mus musculus (house mouse) : Rph3a (rabphilin 3A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rph3a (rabphilin 3A)
Pan paniscus (bonobo/pygmy chimpanzee) : RPH3A (rabphilin 3A)
Canis lupus familiaris (dog) : RPH3A (rabphilin 3A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rph3a (rabphilin 3A)
Sus scrofa (pig) : RPH3A (rabphilin 3A)
more info ...
Allele / Splice: Rph3aTn(sb-T2/Bart3)2.104Mcwi  
Genetic Models: F344-Rph3aTn(sb-T2/Bart3)2.104Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01241,073,296 - 41,149,799 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01242,938,832 - 43,014,142 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41236,678,613 - 36,753,316 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11236,542,000 - 36,616,704 (+)NCBI
Celera1237,205,019 - 37,281,023 (+)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Rph3a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620073
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.