Gatc (glutamyl-tRNA amidotransferase subunit C) - Rat Genome Database

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Gene: Gatc (glutamyl-tRNA amidotransferase subunit C) Rattus norvegicus
Analyze
Symbol: Gatc
Name: glutamyl-tRNA amidotransferase subunit C
RGD ID: 1309698
Description: Predicted to enable glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity. Predicted to be involved in glutaminyl-tRNAGln biosynthesis via transamidation and mitochondrial translation. Predicted to be part of glutamyl-tRNA(Gln) amidotransferase complex. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 42. Orthologous to human GATC (glutamyl-tRNA amidotransferase subunit C); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; 3,4-methylenedioxymethamphetamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: gatC-like protein; glu-AdT subunit C; glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial-like; glutamyl-tRNA(Gln) amidotransferase, subunit C; glutamyl-tRNA(Gln) amidotransferase, subunit C homolog; glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial); LOC100909836; LOC360821; RGD1309698; similar to Putative protein 15E1.2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81246,930,820 - 46,938,790 (+)NCBIGRCr8
mRatBN7.21241,270,096 - 41,278,067 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1241,270,087 - 41,277,995 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1242,436,878 - 42,444,864 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01243,050,547 - 43,058,532 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01242,111,100 - 42,119,086 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01247,031,545 - 47,039,556 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1246,989,951 - 47,039,542 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1247,031,595 - 47,036,956 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01248,824,902 - 48,832,872 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41242,538,202 - 42,546,172 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11242,401,598 - 42,649,780 (+)NCBI
Celera1242,891,045 - 42,899,015 (+)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:18614015   PMID:19805282   PMID:24579914  


Genomics

Comparative Map Data
Gatc
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81246,930,820 - 46,938,790 (+)NCBIGRCr8
mRatBN7.21241,270,096 - 41,278,067 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1241,270,087 - 41,277,995 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1242,436,878 - 42,444,864 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01243,050,547 - 43,058,532 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01242,111,100 - 42,119,086 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01247,031,545 - 47,039,556 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1246,989,951 - 47,039,542 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1247,031,595 - 47,036,956 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01248,824,902 - 48,832,872 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41242,538,202 - 42,546,172 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11242,401,598 - 42,649,780 (+)NCBI
Celera1242,891,045 - 42,899,015 (+)NCBICelera
Cytogenetic Map12q16NCBI
GATC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812120,446,444 - 120,463,749 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12120,446,444 - 120,463,749 (+)EnsemblGRCh38hg38GRCh38
GRCh3712120,884,247 - 120,901,552 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3612119,368,667 - 119,382,145 (+)NCBINCBI36Build 36hg18NCBI36
Celera12120,518,953 - 120,536,271 (+)NCBICelera
Cytogenetic Map12q24.31NCBI
HuRef12117,893,031 - 117,910,347 (+)NCBIHuRef
CHM1_112120,852,732 - 120,870,048 (+)NCBICHM1_1
T2T-CHM13v2.012120,434,957 - 120,452,263 (+)NCBIT2T-CHM13v2.0
Gatc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395115,471,301 - 115,479,220 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5115,471,298 - 115,479,237 (-)EnsemblGRCm39 Ensembl
GRCm385115,333,242 - 115,341,161 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5115,333,239 - 115,341,178 (-)EnsemblGRCm38mm10GRCm38
MGSCv375115,783,251 - 115,791,170 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365115,594,241 - 115,602,160 (-)NCBIMGSCv36mm8
Celera5112,430,278 - 112,438,417 (-)NCBICelera
Cytogenetic Map5FNCBI
cM Map556.05NCBI
Gatc
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545511,184,693 - 11,195,340 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545511,184,400 - 11,195,398 (-)NCBIChiLan1.0ChiLan1.0
GATC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210128,514,711 - 128,532,091 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112128,511,088 - 128,528,472 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012118,028,042 - 118,045,403 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112121,402,534 - 121,419,638 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12121,402,532 - 121,419,628 (+)Ensemblpanpan1.1panPan2
GATC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12616,352,826 - 16,362,298 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2616,356,405 - 16,366,776 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02616,619,962 - 16,630,331 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2616,620,025 - 16,630,672 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12616,580,028 - 16,590,399 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02616,656,738 - 16,667,109 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02616,698,571 - 16,708,944 (+)NCBIUU_Cfam_GSD_1.0
Gatc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118145,993,682 - 146,001,964 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936668488,026 - 500,800 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936668492,571 - 500,845 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GATC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1440,414,017 - 40,423,628 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11440,413,864 - 40,425,306 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21442,881,364 - 42,890,910 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GATC
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111115,800,928 - 115,813,142 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl11115,800,949 - 115,812,555 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037129,286,253 - 129,299,236 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gatc
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474713,210,282 - 13,220,328 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474713,210,001 - 13,220,434 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gatc
18 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:471
Count of miRNA genes:242
Interacting mature miRNAs:287
Transcripts:ENSRNOT00000001536, ENSRNOT00000070868
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121047413746669029Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121047413746669029Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382545055165Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121235161946669029Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121281238546669029Rat
1549902Bp269Blood pressure QTL 269arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121318273646669029Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101318273646669029Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121319815746669029Rat
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)121914436246669029Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961087042828880Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)121961087046669029Rat
7411643Foco20Food consumption QTL 200.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)122032881946669029Rat
1300175Cm5Cardiac mass QTL 53.78heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)122806443345899022Rat
1600386Calcic2Intracellular calcium level QTL 20.001platelet physiology trait (VT:0005464)platelet intracellular calcium level (CMO:0000922)122806443346669029Rat
1300162Bp188Blood pressure QTL 1883.19arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)123210317445899022Rat

Markers in Region
BI286497  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21241,277,507 - 41,277,727 (+)MAPPERmRatBN7.2
Rnor_6.01247,038,998 - 47,039,217NCBIRnor6.0
Rnor_5.01248,832,314 - 48,832,533UniSTSRnor5.0
RGSC_v3.41242,545,614 - 42,545,833UniSTSRGSC3.4
Celera1242,898,457 - 42,898,676UniSTS
RH 3.4 Map12774.92UniSTS
Cytogenetic Map12q16UniSTS
RH141055  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21241,278,246 - 41,278,445 (+)MAPPERmRatBN7.2
Rnor_6.01247,039,736 - 47,039,934NCBIRnor6.0
Rnor_5.01248,833,052 - 48,833,250UniSTSRnor5.0
RGSC_v3.41242,546,352 - 42,546,550UniSTSRGSC3.4
Celera1242,899,195 - 42,899,393UniSTS
Cytogenetic Map12q16UniSTS
RH140294  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21241,276,595 - 41,276,796 (+)MAPPERmRatBN7.2
Rnor_6.01247,038,086 - 47,038,286NCBIRnor6.0
Rnor_5.01248,831,402 - 48,831,602UniSTSRnor5.0
RGSC_v3.41242,544,702 - 42,544,902UniSTSRGSC3.4
Celera1242,897,545 - 42,897,745UniSTS
RH 3.4 Map12771.92UniSTS
Cytogenetic Map12q16UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 74 35 37 11 8
Low 2 1 10 1 16 1 1 6 3 11 11
Below cutoff 14 21 14 3 14 3 5 44 12 20 3

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000001536   ⟹   ENSRNOP00000001536
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1246,989,951 - 47,039,542 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000070868   ⟹   ENSRNOP00000063917
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1241,270,087 - 41,277,995 (+)Ensembl
Rnor_6.0 Ensembl1247,031,595 - 47,036,956 (+)Ensembl
RefSeq Acc Id: NM_001108339   ⟹   NP_001101809
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81246,930,820 - 46,938,790 (+)NCBI
mRatBN7.21241,270,096 - 41,278,067 (+)NCBI
Rnor_6.01247,031,586 - 47,039,556 (+)NCBI
Rnor_5.01248,824,902 - 48,832,872 (+)NCBI
RGSC_v3.41242,538,202 - 42,546,172 (+)RGD
Celera1242,891,045 - 42,899,015 (+)RGD
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001101809   ⟸   NM_001108339
- UniProtKB: D3ZY68 (UniProtKB/Swiss-Prot),   M0R3K2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000063917   ⟸   ENSRNOT00000070868
RefSeq Acc Id: ENSRNOP00000001536   ⟸   ENSRNOT00000001536

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZY68-F1-model_v2 AlphaFold D3ZY68 1-155 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698698
Promoter ID:EPDNEW_R9218
Type:multiple initiation site
Name:Gatc_1
Description:glutamyl-tRNA amidotransferase subunit C
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01247,031,587 - 47,031,647EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309698 AgrOrtholog
BioCyc Gene G2FUF-18986 BioCyc
BioCyc Pathway CITRULBIO-PWY [L-citrulline biosynthesis] BioCyc
  GLUTAMINDEG-PWY [L-glutamine degradation I] BioCyc
  PWY-5921 [glutaminyl-tRNAgln biosynthesis via transamidation] BioCyc
BioCyc Pathway Image CITRULBIO-PWY BioCyc
  GLUTAMINDEG-PWY BioCyc
  PWY-5921 BioCyc
Ensembl Genes ENSRNOG00000001161 Ensembl
  ENSRNOG00000045621 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSRNOG00055001804 UniProtKB/Swiss-Prot
  ENSRNOG00060006440 UniProtKB/Swiss-Prot
  ENSRNOG00065006118 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000070868 ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOT00000070868.3 UniProtKB/Swiss-Prot
  ENSRNOT00055002917 UniProtKB/Swiss-Prot
  ENSRNOT00060010569 UniProtKB/Swiss-Prot
  ENSRNOT00065009320 UniProtKB/Swiss-Prot
InterPro Asp/Glu-ADT_csu UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Asp/Glu-ADT_sf_sub_c UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:360821 UniProtKB/Swiss-Prot
NCBI Gene 360821 ENTREZGENE
PANTHER GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT C, MITOCHONDRIAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR15004 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Glu-tRNAGln UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gatc PhenoGen
RatGTEx ENSRNOG00000001161 RatGTEx
  ENSRNOG00000045621 RatGTEx
  ENSRNOG00055001804 RatGTEx
  ENSRNOG00060006440 RatGTEx
  ENSRNOG00065006118 RatGTEx
Superfamily-SCOP SSF141000 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3ZY68 ENTREZGENE, UniProtKB/Swiss-Prot
  M0R3K2 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Gatc  glutamyl-tRNA amidotransferase subunit C  LOC100909836  glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial-like  Data merged from RGD:6501760 737654 PROVISIONAL
2016-06-29 Gatc  glutamyl-tRNA amidotransferase subunit C  Gatc  glutamyl-tRNA(Gln) amidotransferase, subunit C  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-11-07 Gatc  glutamyl-tRNA(Gln) amidotransferase, subunit C  Gatc  glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-07-05 LOC100909836  glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-05-02 Gatc  glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)  RGD1309698  similar to Putative protein 15E1.2   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1309698  similar to Putative protein 15E1.2   RGD1309698_predicted  similar to Putative protein 15E1.2 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-20 RGD1309698_predicted  similar to Putative protein 15E1.2 (predicted)  LOC360821_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC360821_predicted  similar to Putative protein 15E1.2 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL