RH130548 Marker Search Result - Rat Genome Database

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Marker: RH130548

Symbol: RH130548
Previously known as: AI030402; 
RGD ID: 5044342
Expected Size: 289 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81251,472,769 - 51,473,058 (+)Marker Load Pipeline
mRatBN7.21245,812,979 - 45,813,268 (+)MAPPERmRatBN7.2
Rnor_6.01251,869,727 - 51,870,015NCBIRnor6.0
Rnor_5.01253,608,086 - 53,608,374UniSTSRnor5.0
RGSC_v3.41245,957,530 - 45,957,818UniSTSRGSC3.4
Celera1247,372,589 - 47,372,877UniSTS
RH 3.4 Map12779.63UniSTS
Cytogenetic Map12q16UniSTS
Is Marker For: Genes:   Chek2  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer TTTCCTTTCCCGATAAGCTCTG
Reverse Primer CTACTGGTTCGGGAGGGATAAA
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
621543Chek2checkpoint kinase 2124578882345821382Rat
RefSeq Transcripts NM_053677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC095390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF134054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 25 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)121914436246669029Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411643Foco20Food consumption QTL 200.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)122032881946669029Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)121961087046669029Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101318273646669029Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121319815746669029Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
1300162Bp188Blood pressure QTL 1883.19arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)123210317445899022Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat

1 to 10 of 25 rows


Database
Acc Id
Source(s)
NCBI Gene 114212 UniSTS