Cia12 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Cia12 (Collagen induced arthritis QTL 12) Rattus norvegicus

Symbol: Cia12
Name: Collagen induced arthritis QTL 12
RGD ID: 61421
Also known as: Type II Collagen induced arthritis QTL 12
Trait: joint integrity trait   (VT:0010548)    
Measurement Type: joint inflammation composite score   (CMO:0000919)    
LOD Score: 4.6
P Value: Not Available
Variance: 10.2
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21213,635,523 - 35,682,913RGD_MAPPER_PIPELINE
Rnor_6.01215,714,609 - 41,291,738RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01217,721,341 - 43,150,909RGDRnor5.0
RGSC_v3.4127,148,164 - 36,894,750RGDRGSC3.4
RGSC_v3.1127,259,304 - 36,758,138RGD
Cross Type: F2
Strains Crossed: DA/Bkl BN/SsN 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Flt1 is a candidate Gene for Cia12
Pdgfa is a candidate Gene for Cia12
Hspb1 is a candidate Gene for Cia12
Ncf1 is a candidate Gene for Cia12
Flt3 is a candidate Gene for Cia12

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/SsN  (IEA)
DA/Bkl  (IEA)

References

Related QTLs

Related QTL Description Reference
Cia25 maps to same region RGD:1285224
Eau2 interacts with RGD:61073
Pia4 maps to same region RGD:2302026
Pia38 maps to same region RGD:2302026


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3447Ptpn11protein tyrosine phosphatase, non-receptor type 11124089551540955999Rat
68425Cldn3claudin 3122183134121832813Rat
69430Stx1asyntaxin 1A122468205024710002Rat
619974Aslargininosuccinate lyase123016092230178348Rat
619988Dnah10dynein, axonemal, heavy chain 10123723748237365258Rat
619719Mdh2malate dehydrogenase 2122394145123954406Rat
619781Erp29endoplasmic reticulum protein 29124061937740625884Rat
61307Ncf1neutrophil cytosolic factor 1122549710425506300Rat
3282Pdgfaplatelet derived growth factor subunit A121773414117756186Rat
3124Muc3mucin 3, intestinal122253566322584775Rat
3325Phkg1phosphorylase kinase catalytic subunit gamma 1123045043130464314Rat
61974Hpd4-hydroxyphenylpyruvate dioxygenase123882860638839956Rat
69313Acheacetylcholinesterase122247235822477052Rat
69317Irs3insulin receptor substrate 3122212030522125103Rat
69319Gnb2G protein subunit beta 2122222907922234096Rat
2187Azgp1alpha-2-glycoprotein 1, zinc-binding121919656519203094Rat
71018Gna12G protein subunit alpha 12121589020215971212Rat
69284Sh2b2SH2B adaptor protein 2122347147723501043Rat
62019Clip2CAP-GLY domain containing linker protein 2122517295725236935Rat
62055Limk1LIM domain kinase 1122503663025070538Rat
62073P2rx4purinergic receptor P2X 4123930802239325673Rat
71055Grifingalectin-related inter-fiber protein121617010816172144Rat
3241P2rx7purinergic receptor P2X 7123935361339396042Rat
69361UncxUNC homeobox121718215817186679Rat
69399VgfVGF nerve growth factor inducible122267730222680630Rat
621006Atp6v0a2ATPase H+ transporting V0 subunit a2123736832137398233Rat
620305Hip1huntingtin interacting protein 1122418079524315373Rat
628817Fzd9frizzled class receptor 9122447398124476295Rat
631346Trim50tripartite motif-containing 50122434842624365467Rat
620680Pom121POM121 transmembrane nucleoporin122431657524341943Rat
631339Plod3procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3122271642122726982Rat
727930Gjc3gap junction protein, gamma 3121916607419177701Rat
2772Gusbglucuronidase, beta123020206630215583Rat
620747Slc12a9solute carrier family 12, member 9122243484522451265Rat
68335Porcytochrome p450 oxidoreductase122399841124017063Rat
620092Camkk2calcium/calmodulin-dependent protein kinase kinase 2123925340939302601Rat
708472Asmtacetylserotonin O-methyltransferase121852138318527036Rat
621418Adap1ArfGAP with dual PH domains 1121741632717468212Rat
620618Cux1cut-like homeobox 1122315088623470095Rat
620753CrcpCGRP receptor component123012523730160857Rat
727862Ift81intraflagellar transport 81123942016139507412Rat
621333Stag3stromal antigen 3121959974119630775Rat
620073Rph3arabphilin 3A124107329641149799Rat
620856Gtf2ird1GTF2I repeat domain containing 1122526405225370947Rat
620254Abcb9ATP binding cassette subfamily B member 9123792397437956678Rat
621244Ubcubiquitin C123663845736642734Rat
67404Clip1CAP-GLY domain containing linker protein 1123834520338452650Rat
69243Tmed2transmembrane p24 trafficking protein 2123747125937480344Rat
620171Trafd1TRAF type zinc finger domain containing 1124069552040709438Rat
621558Vamp7vesicle-associated membrane protein 7121899656619033714Rat
621363Gpc2glypican 2121959304119599374Rat
631397Lat2linker for activation of T cells family, member 2122511409925128381Rat
621615Hip1rhuntingtin interacting protein 1 related123802451738053184Rat
620400MlxiplMLX interacting protein-like122459064524619639Rat
708522Aacsacetoacetyl-CoA synthetase123651239336555694Rat
621110Psmd9proteasome 26S subunit, non-ATPase 9123878653938805121Rat
708533Rimbp2RIMS binding protein 2123139322931605567Rat
621198Rfc2replication factor C subunit 2122513037525143480Rat
727952Hcar2hydroxycarboxylic acid receptor 2123816046438161546Rat
621760Oas1a2'-5' oligoadenylate synthetase 1A124120068041211393Rat
619826Rpl6ribosomal protein L6124087757840882032Rat
1304672Castor2cytosolic arginine sensor for mTORC1 subunit 2122559580025638806Rat
67394Elnelastin122497847825021864Rat
1304681Abhd11abhydrolase domain containing 11122472227724725760Rat
619845Gper1G protein-coupled estrogen receptor 1121730912217315267Rat
1303140Rilpl2Rab interacting lysosomal protein-like 2123754491837556453Rat
3249Serpine1serpin family E member 1122264110422651482Rat
620819Eif2b1eukaryotic translation initiation factor 2B subunit alpha123744413637452391Rat
1303034Gpn3GPN-loop GTPase 3123967074639679364Rat
628633MafkMAF bZIP transcription factor K121692398916934706Rat
628636Rnf34ring finger protein 34123916429039185209Rat
1305685Naa25N(alpha)-acetyltransferase 25, NatB auxiliary subunit124062800540680421Rat
620587LfngLFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase121611776716126211Rat
620606Zp3zona pellucida glycoprotein 3122373522523752734Rat
3270Pcolceprocollagen C-endopeptidase enhancer122215399522160311Rat
708469Slc15a4solute carrier family 15 member 4123275382432773277Rat
735062Tmem132dtransmembrane protein 132D123193434332607768Rat
708392Cyp3a9cytochrome P450, family 3, subfamily a, polypeptide 9121907428819114491Rat
1304973Mospd3motile sperm domain containing 3122216497822169251Rat
62002Ywhagtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma122378954723817884Rat
61306Hspb1heat shock protein family B (small) member 1122383939023841051Rat
2174Atp2a2ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2123955390339603326Rat
1306837Dhx37DEAH-box helicase 37123659405836614165Rat
620643Vps33aVPS33A core subunit of CORVET and HOPS complexes123845981638482903Rat
628728Il3rainterleukin 3 receptor subunit alpha121853476218542508Rat
1304576Vps37bVPS37B subunit of ESCRT-I123798479038023369Rat
2559Epoerythropoietin122227482822278268Rat
1305004Sfswapsplicing factor SWAP123074056330811015Rat
1306413Pop7POP7 homolog, ribonuclease P/MRP subunit122225971322260754Rat
1305845Styxl1serine/threonine/tyrosine interacting-like 1122395456323987155Rat
1305631Cox19cytochrome c oxidase assembly factor COX19121739562417405103Rat
1305911Ap1s1adaptor related protein complex 1 subunit sigma 1122266512822676079Rat
3392Prkar1bprotein kinase cAMP-dependent type I regulatory subunit beta121761453617713567Rat
1305193Cyp2w1cytochrome P450, family 2, subfamily w, polypeptide 1121738274917387909Rat
1306125Anapc5anaphase-promoting complex subunit 5123920913439242696Rat
1305095Fbxo24F-box protein 24122213846022153670Rat
1305044Zanzonadhesin122228537722389008Rat
1305017Dhrsxdehydrogenase/reductase X-linked121851685818521235Rat
1306590Agfg2ArfGAP with FG repeats 2122208202822118239Rat
1305405Zcwpw1zinc finger CW-type and PWWP domain containing 1122141887421450617Rat
1309933Gigyf1GRB10 interacting GYF protein 1122223429622251898Rat
1307973Rilpl1Rab interacting lysosomal protein-like 1123749032037528393Rat
1306702Tmem184atransmembrane protein 184A121690686316924143Rat
621467Adam1aADAM metallopeptidase domain 1a124053373140536632Rat
1305843Caln1calneuron 1122930711729796996Rat
1310656Pheta1PH domain containing endocytic trafficking adaptor 1124022531640230573Rat
1304896Glt1d1glycosyltransferase 1 domain containing 1123266666432749617Rat
1310005Sbno1strawberry notch homolog 1123759369237650761Rat
1304763Cct6achaperonin containing TCP1 subunit 6A123049158430501813Rat
1305370Ift22intraflagellar transport 22122280438422811036Rat
3377Ppp1ccprotein phosphatase 1 catalytic subunit gamma123986430239882030Rat
1307435Gtf2ird2GTF2I repeat domain containing 2122550905925555554Rat
708393Oas1b2-5 oligoadenylate synthetase 1B124125576241266430Rat
1307763Actl6bactin-like 6B122219459522211107Rat
620367RanRAN, member RAS oncogene family123131955631324105Rat
1308332Vps29VPS29 retromer complex component123969006939699114Rat
1311043SbdsSBDS, ribosome maturation factor122992144329930602Rat
1311985Arpc3actin related protein 2/3 complex, subunit 3123965395139667817Rat
1310885Diablodiablo, IAP-binding mitochondrial protein123849023038503344Rat
1560550Mepcemethylphosphate capping enzyme122172124621725965Rat
1307295Rabgef1RAB guanine nucleotide exchange factor 1122996013230004727Rat
1308908Ints1integrator complex subunit 1121695070416974896Rat
1309549Ttyh3tweety family member 3121608407816112672Rat
1359379Oas1i2 ' -5 ' oligoadenylate synthetase 1I124115548941167501Rat
621080Nudt1nudix hydrolase 1121639157816398771Rat
1309774Zcchc8zinc finger CCHC-type containing 8123830366538327174Rat
2302Scarb1scavenger receptor class B, member 1123669495236761445Rat
1309735Lamtor4late endosomal/lysosomal adaptor, MAPK and MTOR activator 4121957390919577625Rat
1310463Zfp68zinc finger protein 68121815259618167523Rat
1311541Mmp17matrix metallopeptidase 17123070190030728683Rat
1311541Mmp17matrix metallopeptidase 17123035387430356526Rat
1311873Orai1ORAI calcium release-activated calcium modulator 1123898190338995570Rat
1306877Asmtlacetylserotonin O-methyltransferase-like121853209018534761Rat
1310420Tyw1tRNA-yW synthesizing protein 1 homolog122982499029919240Rat
1310861Fam216afamily with sequence similarity 216, member A123967968839688831Rat
1310867Pitpnm2phosphatidylinositol transfer protein, membrane-associated 2123780533237903856Rat
1310724Snrnp35small nuclear ribonucleoprotein U11/U12 subunit 35123753108237538823Rat
1310991Zfand2azinc finger AN1-type containing 2A121725209317263477Rat
1561105Gal3st4galactose-3-O-sulfotransferase 4121958311019592444Rat
1311980Fam20cFAM20C, golgi associated secretory pathway kinase121791377117972733Rat
1308231Rhbdd2rhomboid domain containing 2122409113224102081Rat
69219Aldh2aldehyde dehydrogenase 2 family member124046641840498813Rat
1310788Hvcn1hydrogen voltage-gated channel 1123982281439851093Rat
1311349IqceIQ motif containing E121603060716069872Rat
1559499RGD1559499similar to cell surface receptor FDFACT122080872520814863Rat
1310198Polr2jRNA polymerase II subunit J122358722223592774Rat
1311608Taf6TATA-box binding protein associated factor 6121932026919328706Rat
1308664Cdk2ap1cyclin-dependent kinase 2 associated protein 1123766836937677067Rat
1311660Get4guided entry of tail-anchored proteins factor 4121746911217486709Rat
1310245Ccl24C-C motif chemokine ligand 24122413152924152626Rat
1309018Eif3beukaryotic translation initiation factor 3, subunit B121628573016310190Rat
1308608Alkbh4alkB homolog 4, lysine demethylase122356820423574133Rat
1305455Trappc14trafficking protein particle complex subunit 14121957789519582185Rat
1308764Psphphosphoserine phosphatase123051412830526551Rat
1308473Tpst1tyrosylprotein sulfotransferase 1123004575330112377Rat
1309919Cops6COP9 signalosome subunit 6121930338719306226Rat
1305944Mrm2mitochondrial rRNA methyltransferase 2121639874916403656Rat
1333968Olr1863-psolfactory receptor pseudogene 1863123479975834800396Rat
1307875Micall2MICAL-like 2121698801317016794Rat
1305791Snx8sorting nexin 8121634091716389500Rat
1308214Chst12carbohydrate sulfotransferase 12121619997516218404Rat
1308223Rad9bRAD9 checkpoint clamp component B123969907639731218Rat
1311314Amz1archaelysin family metallopeptidase 1121597521116011238Rat
1305494Gtf2h3general transcription factor IIH subunit 3123742755637444027Rat
1310152Tfr2transferrin receptor 2122217738222194330Rat
1309612B3gnt4UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4123850336138506793Rat
1310217Kdm2blysine demethylase 2B123902192439161954Rat
1306970Ssc4dscavenger receptor cysteine rich family member with 4 domains122375282323769466Rat
1307636Cnpy4canopy FGF signaling regulator 4121932902719335126Rat
1305967Cux2cut-like homeobox 2124001677440221067Rat
1306668Fis1fission, mitochondrial 1122275048522765324Rat
1310964Nyap1neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1122202518622037428Rat
1309981Zscan21zinc finger and SCAN domain containing 21121926297719277913Rat
1307558Rcc1lRCC1 like122556187125592337Rat
1309615Upk3buroplakin 3B122367616923682395Rat
1308926Fkbp6FKBP prolyl isomerase family member 6122436594124438088Rat
1310213Orai2ORAI calcium release-activated calcium modulator 2122354448323564602Rat
1306932Mblac1metallo-beta-lactamase domain containing 1121933584119337103Rat
1306980Piwil1piwi-like RNA-mediated gene silencing 1123160864131629961Rat
1310233Ap4m1adaptor related protein complex 4 subunit mu 1121931422219320339Rat
1310159Acad10acyl-CoA dehydrogenase family, member 10124041791840460562Rat
1306637Atxn2ataxin 2124026460140335637Rat
1308787Elfn1extracellular leucine-rich repeat and fibronectin type III domain containing 1121674934016813838Rat
1310293Ncor2nuclear receptor co-repressor 2123687191737033701Rat
1307650Mrps17mitochondrial ribosomal protein S17123057038630573670Rat
1307657Arl6ip4ADP-ribosylation factor like GTPase 6 interacting protein 4123790437637906521Rat
1332710Olr1573-psolfactory receptor pseudogene 1573121850429018505080Rat
1310678Cldn15claudin 15122273819822750392Rat
1307932Cldn4claudin 4122476121024763008Rat
1307905Kntc1kinetochore associated 1123820046338274162Rat
1309268Nsun5NOP2/Sun RNA methyltransferase 5122434194024346900Rat
1310594Ogfod22-oxoglutarate and iron-dependent oxygenase domain containing 2123790713037910446Rat
1310349Oas1d2'-5' oligoadenylate synthetase 1D124117947741188796Rat
1306145Lrch4leucine rich repeats and calponin homology domain containing 4122212738722138436Rat
1309762Hectd4HECT domain E3 ubiquitin protein ligase 4124071207840860930Rat
68411Sh2b3SH2B adaptor protein 3124026199040265757Rat
1310383Pptc7protein phosphatase targeting COQ7123973110739769480Rat
1561903Tmem270transmembrane protein 270122480320424808287Rat
1564882Rsrc2arginine and serine rich coiled-coil 2123827429038294294Rat
1303018Mcm7minichromosome maintenance complex component 7121930661519313877Rat
1559821RGD1559821similar to myosin, light polypeptide 6, alkali, smooth muscle and non-muscle123318239433183048Rat
1359732Oas1h2 ' -5 ' oligoadenylate synthetase 1H124121458741224254Rat
1560288RGD1560288similar to DNA segment, Chr 19, Brigham & Womens Genetics 1357 expressed121863351318635365Rat
1561461Lrrc43leucine rich repeat containing 43123850710238524715Rat
1562172Spry3sprouty RTK signaling antagonist 3121893008718940622Rat
1566418LOC498154hypothetical protein LOC498154121727763517380497Rat
1566421Nipsnap2nipsnap homolog 2123052754030566090Rat
1566006RGD1566006similar to paired immunoglobin-like type 2 receptor beta122188100821891122Rat
1566028Dnaaf5dynein, axonemal, assembly factor 5121754546817584466Rat
1562406Sap25Sin3A-associated protein 25122212556822126671Rat
1359647Oas1f2 ' -5 ' oligoadenylate synthetase 1F124122791041237209Rat
1561143RGD1561143similar to cell surface receptor FDFACT122186614821923271Rat
1563240Ervfrd-1endogenous retrovirus group FRD member 1, envelope122516113025168182Rat
1563253Sumf2sulfatase modifying factor 2123046502530490683Rat
1560258Nupr2nuclear protein 2, transcriptional regulator123030093630304041Rat
1562319RGD1562319similar to family with sequence similarity 55, member C121956140819567858Rat
1562334Ccdc63coiled-coil domain containing 63123990512039950719Rat
1561886RGD1561886similar to ribosomal protein L27123719454137195050Rat
1560774MlxipMLX interacting protein123856743838638952Rat
1359611Oas1e2'-5' oligoadenylate synthetase 1E124128147941290500Rat
1560731Gpr146G protein-coupled receptor 146121734339617358631Rat
1559988Zbed5zinc finger, BED-type containing 5123030846930314520Rat
1561329LOC498155LRRGT00167121782466217876435Rat
1303249Vkorc1l1vitamin K epoxide reductase complex, subunit 1-like 1123021882530268990Rat
1359506LOC288521similar to Leukosialin precursor (Leucocyte sialoglycoprotein) (Sialophorin) (CD43) (W3/13 antigen)121829190118303041Rat
1359142Sun1Sad1 and UNC84 domain containing 1121748848217533334Rat
1564113Mapkapk5MAPK activated protein kinase 5124051037840529332Rat
1560616Zkscan1zinc finger with KRAB and SCAN domains 1121923109219247393Rat
1560262RGD1560262similar to cell surface receptor FDFACT122028207220300904Rat
1334044Olr1822-psolfactory receptor pseudogene 1822123601357036014197Rat
1559588RGD1559588similar to cell surface receptor FDFACT121989054619896468Rat
1564022Vom2r63vomeronasal 2 receptor, 63122100803521077539Rat
1311474Tmem120atransmembrane protein 120A122398959623998257Rat
1359222Eif4heukaryotic translation initiation factor 4H122509311925109805Rat
1559964MGC112692similar to Leukosialin precursor (Leucocyte sialoglycoprotein) (Sialophorin) (CD43) (W3/13 antigen)121828085818286468Rat
1311927Anapc7anaphase promoting complex subunit 7123961389839641999Rat
1564245Myl2myosin light chain 2123995186339959065Rat
727961Gtf2igeneral transcription factor II I122541080425487970Rat
1303319Tmem248transmembrane protein 248122993172829958050Rat
1562250LOC498152hypothetical protein LOC498152121721129217232275Rat
1560412RGD1560412similar to Leukosialin precursor (Leucocyte sialoglycoprotein)121825348318258585Rat
1359435Zfp157zinc finger protein 157121846128318495871Rat
1359442Lrwd1leucine-rich repeats and WD repeat domain containing 1122357423423587262Rat
1566191Tmem132btransmembrane protein 132B123596971836398233Rat
1563400RGD1563400similar to paired immunoglobin-like type 2 receptor beta122018510020208194Rat
1586391Ccdc62coiled-coil domain containing 62123805753238093916Rat
2558Stx2syntaxin 2123132420331360249Rat
1583278Pilrapaired immunoglobin-like type 2 receptor alpha122141259821418621Rat
1566386RGD1566386similar to Hypothetical protein A430033K04121810582118139420Rat
1585866PvrigPVR related immunoglobulin domain containing121967967119681861Rat
1583828LOC363903similar to ribosomal protein S13122417284024173294Rat
1561711Bri3bpBri3 binding protein123657601836587839Rat
1584665Vom2r64vomeronasal 2 receptor, 64122094393620978110Rat
1584946LOC363897similar to Ras-related protein Rap-1b precursor (GTP-binding protein smg p21B)122189404621894945Rat
1584948LOC363883similar to dopamine-responsive protein121889491018896549Rat
1587560Kmt5alysine methyltransferase 5A123755815037581183Rat
1560281RGD1560281similar to cell surface receptor FDFACT122066687520675658Rat
1562930Vom2r61vomeronasal 2 receptor, 61121993058419939565Rat
1584200Denrdensity regulated reinitiation and release factor123809571738117758Rat
1584367Ppp1r35protein phosphatase 1, regulatory subunit 35122172748521728678Rat
1561790Dtx2deltex E3 ubiquitin ligase 2122368795823727594Rat
1583091Morn3MORN repeat containing 3123895319938976520Rat
1583094LOC687612hypothetical protein LOC687612123894451238945148Rat
1562569RGD1562569similar to ribosomal protein S8121817437118175092Rat
1583509LOC681182similar to paired immunoglobin-like type 2 receptor beta122150270121510636Rat
1583824Tmem132ctransmembrane protein 132C123280637233130746Rat
1583825Fzd10frizzled class receptor 10123175740731760604Rat
1583826LOC363907similar to Purine nucleoside phosphorylase (Inosine phosphorylase) (PNP)122694367226947876Rat
1583827LOC363906hypothetical LOC363906122515673725157396Rat
1561730RGD1561730similar to cell surface receptor FDFACT122059292220660658Rat
1563482Mtrfrmitochondrial translation release factor in rescue123768015237682994Rat
1562525RGD1562525similar to cell surface receptor FDFACT122056964220572926Rat
1559954Nxpe5l1neurexophilin and PC-esterase domain family, member 5-like 1121951885619530862Rat
1582914Kctd7potassium channel tetramerization domain containing 7123002408030033357Rat
1565146Brat1BRCA1-associated ATM activator 1121601606216028534Rat
1583180Trip6thyroid hormone receptor interactor 6122245159622456003Rat
1584380Tsc22d4TSC22 domain family, member 4122200895622021814Rat
1561258Myl10myosin light chain 10122301181723075558Rat
1583193Ephb4EPH receptor B4122239333822418332Rat
1563452Galnt17polypeptide N-acetylgalactosaminyltransferase 17122838187929268457Rat
1584675Pilrbpaired immunoglobin-like type 2 receptor beta122088206220900765Rat
1564640Akap17aA-kinase anchoring protein 17A121852711618531780Rat
1564948Cfap251cilia and flagella associated protein 251123870891538781598Rat
1566266Tctn1tectonic family member 1123979094839828215Rat
1593752LOC686707similar to tubulin, beta, 2121888431918885386Rat
1587769Vps37dVPS37D subunit of ESCRT-I122465134224656793Rat
1586364Hcar1hydroxycarboxylic acid receptor 1123814517738146232Rat
1591401Col26a1collagen type XXVI alpha 1 chain122283486622980603Rat
1587868Srrm3serine/arginine repetitive matrix 3122385540023925793Rat
1592278Frg1l1FSHD region gene 1-like 1123400385634004722Rat
1591241Srrtserrate, RNA effector molecule122245789822471090Rat
1585128Bcl7aBAF chromatin remodeling complex subunit BCL7A123865929438691191Rat
1587046LOC680837hypothetical protein LOC680837121948522019485646Rat
1587058LOC680825hypothetical protein LOC680825121946484119465674Rat
1589742Bud23BUD23, rRNA methyltransferase and ribosome maturation factor122466962624680833Rat
1585183Il31interleukin 31123852757538538086Rat
1587817Ccl26C-C motif chemokine ligand 26122415718224161870Rat
1584031Tmem120btransmembrane protein 120B123889484738916237Rat
1584038Rhofras homolog family member F, filopodia associated123887976338894095Rat
1588881Mettl27methyltransferase like 27122476735124775891Rat
1585479Abhd11-as1ABHD11 antisense RNA 1 (tail to tail)122472119024722177Rat
1591278LOC686940similar to enoyl Coenzyme A hydratase domain containing 2122206107822062018Rat
1565457Rasa4RAS p21 protein activator 4122359698923624386Rat
1586551BrapBRCA1 associated protein124038189240417764Rat
1585449LOC686150similar to actin related protein 2/3 complex, subunit 5122474411724745066Rat
1588255Nxpe5neurexophilin and PC-esterase domain family, member 5121942895019440791Rat
1592512LOC686837similar to EC2-V2R pheromone receptor122111051921129995Rat
1595783Dnajc30DnaJ heat shock protein family (Hsp40) member C30122466839824669464Rat
1597090Bcl7bBAF chromatin remodeling complex subunit BCL7B122454374824557093Rat
1601131Ccdc92coiled-coil domain containing 92123721073537237848Rat
1596066Tmem116transmembrane protein 116124053726140618805Rat
1597089Baz1bbromodomain adjacent to zinc finger domain, 1B122447888224536851Rat
1591744LOC680456similar to autism susceptibility candidate 2121841235018441216Rat
1595919Cyp3a62cytochrome P450, family 3, subfamily a, polypeptide 62121867980918709397Rat
1595708Prkrip1PRKR interacting protein 1122351498723533278Rat
1595709LOC498158hypothetical LOC498158121913503619136080Rat
1596408LOC685289similar to paired immunoglobin-like type 2 receptor beta122030456320307759Rat
1593402LOC690669similar to Spindlin-like protein 2 (SPIN-2)123507481635075519Rat
1592588Mogat3monoacylglycerol O-acyltransferase 3122270862222710787Rat
1594158Foxl3forkhead box L3121790204517904348Rat
1596881Mad1l1mitotic arrest deficient 1 like 1121641008316721232Rat
1594795Adgrd1adhesion G protein-coupled receptor D1123113480631249594Rat
1588777Rflnarefilin A123703873237047628Rat
1594709LOC690551similar to Peptidyl-prolyl cis-trans isomerase A (PPIase) (Rotamase) (Cyclophilin A) (Cyclosporin A-binding protein) (SP18)124098148740981996Rat
1594781LOC689271similar to ATP synthase, H+ transporting, mitochondrial Fo complex, subunit f, isoform 2123125812931258546Rat
1593819LOC685438similar to paired immunoglobin-like type 2 receptor beta122025002020276122Rat
1596186Septin14septin 14123060016230623173Rat
1592490LOC686862similar to paired immunoglobin-like type 2 receptor beta122134493721348371Rat
1595038Tbl2transducin (beta)-like 2122456584324578855Rat
1598237Upk3bl1uroplakin 3B like 1122365499623661009Rat
1598368Mphosph9M-phase phosphoprotein 9123770028237766487Rat
1591895Tctn2tectonic family member 2123740089637427256Rat
1598196LOC501838similar to 60S ribosomal protein L32123933566839337002Rat
1598198LOC501835similar to 40S ribosomal protein S9123019322130194563Rat
1598199Vom2r-ps104vomeronasal 2 receptor, pseudogene 104121995544719973166Rat
1598200Vom2r62vomeronasal 2 receptor, 62121993058519973166Rat
1598201LOC501813similar to Leukosialin precursor (Leucocyte sialoglycoprotein) (Sialophorin) (Ly-48) (B cell differentiation antigen LP-3) (CD43 antigen)121830330318310009Rat
1598202LOC501812similar to Leukosialin precursor (Leucocyte sialoglycoprotein) (Sialophorin) (Ly-48) (B cell differentiation antigen LP-3) (CD43 antigen)121828677618287903Rat
1598204LOC501810similar to Leukosialin precursor (Leucocyte sialoglycoprotein) (Sialophorin) (Ly-48) (B cell differentiation antigen LP-3) (CD43 antigen)121823220018253414Rat
1597726LOC685157similar to paired immunoglobin-like type 2 receptor beta122027089720276883Rat
1596422LOC685275similar to paired immunoglobin-like type 2 receptor beta122030736820333021Rat
1598146LOC679924similar to Kif19A CG9913-PB, isoform B121623351216283177Rat
1626043Vom2r-ps103vomeronasal 2 receptor, pseudogene 103122037245220382259Rat
1626049Vom2r-ps101vomeronasal 2 receptor, pseudogene 101122041969720427134Rat
1625996Vom2r-ps100vomeronasal 2 receptor, pseudogene 100122047416420847911Rat
1625997Vom2r-ps98vomeronasal 2 receptor, pseudogene 98121819143918193408Rat
2319950Psmg3proteasome assembly chaperone 3121689899916901945Rat
2319349LOC100361826sialophorin-like121826955818274549Rat
2318233LOC100365854hypothetical LOC100365854121980920819813701Rat
2319106Rpl31l4ribosomal protein L31-like 4121915945819159909Rat
2322870Znhit1zinc finger, HIT-type containing 1122272664322732917Rat
2322358LOC100363794hypothetical LOC100363794122138693221387701Rat
2320799LOC10036456140S ribosomal protein S27-like124066904740669754Rat
2322512LOC100360238rCG21419-like124055178640556984Rat
2323211Card11caspase recruitment domain family, member 11121570060015844512Rat
2323325Setd1bSET domain containing 1B, histone lysine methyltransferase123884316738869180Rat
2323644LOC100359550protein S100-A11-like123833986338340304Rat
2324513LOC10036254139S ribosomal protein L23, mitochondrial-like123386054333860971Rat
2325388Mir106bmicroRNA 106b121930775219307833Rat
2323959Auts2activator of transcription and developmental regulator AUTS2122715536228252752Rat
2325459Mir93microRNA 93121930754319307629Rat
2325466Mir339microRNA 339121736900217369097Rat
2325594Mir25microRNA 25121930734019307423Rat
2324094Ddx55DEAD-box helicase 55123745300537468935Rat
2324823LOC100363066ribosomal protein L38-like123962854639628858Rat
2324824Zfp11zinc finger protein 11123065524530668370Rat
4888576Mir702microRNA 702122272184622721952Rat
6488308LOC10091219440S ribosomal protein SA-like122581538325821742Rat
6489147Zfp113zinc finger protein 3121928754119298172Rat
6485223LOC100912943mucin-3B-like122250165722505712Rat
6492489LOC100911540guanine nucleotide-binding protein subunit beta-2-like 1-like123590536235906429Rat
6491226Zfp664zinc finger protein 664123620132736203396Rat
6494869LOC100911071leukosialin-like121836278318369489Rat
6498646LOC100910427probable peptide chain release factor C12orf65 homolog, mitochondrial-like123767868237684533Rat
6498885LOC100910352leukosialin-like121824222618243370Rat
6499303LOC100910306leukosialin-like121823739818238667Rat
6499499LOC100910238leukosialin-like121822691418228058Rat
6503018LOC100909556paired immunoglobulin-like type 2 receptor beta-like122005764720061888Rat
6496638LOC100910788coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial-like123044334330446075Rat
6496729LOC100910801paired immunoglobulin-like type 2 receptor alpha-like122165917521670430Rat
6496734LOC100910802uncharacterized LOC100910802122278423322799362Rat
6497070LOC100910733leukosialin-like121831006218311344Rat
6497217LOC100910636zinc finger CW-type PWWP domain protein 1-like122169007421720186Rat
6500421LOC100910045paired immunoglobulin-like type 2 receptor beta-like122072626820729217Rat
6497409LOC100910669paired immunoglobulin-like type 2 receptor alpha-like122167855021689821Rat
6500969LOC100909933paired immunoglobulin-like type 2 receptor beta-like122050787520511413Rat
6497892LOC100910529leukosialin-like121822132318226425Rat
6498401LOC100910497paired immunoglobulin-like type 2 receptor alpha-like122193158721950593Rat
7489014Mir6322microRNA 6322122682506026825178Rat
7541068LOC102551737cell wall protein PRY3-like122178206021784178Rat
7528898LOC10254708760S ribosomal protein L7-like123928488239285960Rat
7507387LOC102556456transmembrane protein 254-like123309252533095657Rat
7501350LOC102550242ubiquitin-conjugating enzyme E2 variant 1-like123893553638944189Rat
7510972LOC102551005cell wall protein DAN4-like122250303622503979Rat
7536442LOC10254879440S ribosomal protein S27-like121786643017868387Rat
7536909Ufsp1UFM1-specific peptidase 1122247114122472357Rat
7519457LOC102555730uncharacterized LOC102555730123684325936844420Rat
7519900LOC102546414uncharacterized LOC102546414121693484716937000Rat
7520086LOC102553484uncharacterized LOC102553484122497367924980976Rat
7612525LOC102554070uncharacterized LOC102554070121883542818932787Rat
7647582LOC102554880voltage-dependent calcium channel gamma-8 subunit-like122224501022251960Rat
7634124LOC102550309uncharacterized LOC102550309123510001735105553Rat
7559672LOC102554701zinc finger protein AEBP2-like122846925328477633Rat
7587101LOC102553721uncharacterized LOC102553721122564866225654744Rat
7594601LOC102551204uncharacterized LOC102551204122268063622685476Rat
7626939LOC102554946uncharacterized LOC102554946122053952520544936Rat
7641109LOC102554019uncharacterized LOC102554019121870206818756568Rat
7643065LOC102554407paired immunoglobulin-like type 2 receptor beta-like122024372620246809Rat
7572143LOC102553887uncharacterized LOC102553887122633794826351461Rat
7543130LOC102552690uncharacterized LOC102552690123798001337984712Rat
7543274LOC102556457F-box only protein 22-like124031720840320831Rat
7556717LOC102546903paired immunoglobulin-like type 2 receptor beta-2-like122138018421385338Rat
7573572LOC102549705uncharacterized LOC102549705123989078339899849Rat
7601016LOC102549704heat shock protein HSP 90-alpha-like121939857619399338Rat
7580031LOC102555795uncharacterized LOC102555795123718175137183042Rat
7549056LOC102554260uncharacterized LOC102554260122709171827100401Rat
7563147LOC102548966uncharacterized LOC102548966122431406624316679Rat
7581366LOC102547331coiled-coil domain-containing protein 90B, mitochondrial-like121917242519173649Rat
7603816LOC102550490uncharacterized LOC102550490122221123222213421Rat
7604571LOC102546368G-protein coupled receptor family C group 6 member A-like122118282521197201Rat
7586081LOC10255561040S ribosomal protein S2-like122620936826214894Rat
7553419LOC102554231paired immunoglobulin-like type 2 receptor alpha-like122024728820248195Rat
7568494LOC102556093uncharacterized LOC102556093123887013238878652Rat
7586771LOC102547495uncharacterized LOC102547495123882128738828645Rat
7673190LOC102557569mucin-12-like122253637422539002Rat
7673409LOC102546864uncharacterized LOC102546864121732127017333460Rat
7677226LOC102556092uncharacterized LOC102556092123718383937210624Rat
7684404LOC102550645uncharacterized LOC102550645122928902029294566Rat
7726046LOC102547532paired immunoglobulin-like type 2 receptor beta-like121988027019884523Rat
7689144LOC102555340uncharacterized LOC102555340123094591230954007Rat
7689536LOC102552106paired immunoglobulin-like type 2 receptor beta-like121970399319708246Rat
7734862Lraplocus regulating alcohol preference123901625839017876Rat
7689818LOC102553558uncharacterized LOC102553558122514838125150352Rat
7738182LOC102555154mucin-12-like122254074622569165Rat
7668786LOC102549552uncharacterized LOC102549552123388218233884539Rat
7719202LOC102551436uncharacterized LOC102551436121967050919677380Rat
7720926LOC102550116zinc finger protein with KRAB and SCAN domains 7-like123064142430647457Rat
7675853LOC102551138uncharacterized LOC102551138121951877219542596Rat
7709136LOC102550582uncharacterized LOC102550582123556197335567921Rat
7710500LOC102546488uncharacterized LOC102546488123899575339005428Rat
7682710LOC102547493uncharacterized LOC102547493121752433117525919Rat
9132159LOC103691282uncharacterized LOC103691282122200770522009220Rat
9133337LOC103691347eukaryotic translation initiation factor 1 pseudogene123733163937332271Rat
9133748LOC103691050uncharacterized LOC103691050121772066917724292Rat
9146355LOC103693633uncharacterized LOC103693633122174735221748866Rat
9188281LOC103691337uncharacterized LOC103691337123335267333357264Rat
9110209LOC103693634uncharacterized LOC103693634122191647121919796Rat
9192914LOC103691322uncharacterized LOC103691322123013684030139887Rat
9162370LOC103693629paired immunoglobulin-like type 2 receptor beta122068083920689342Rat
9170642LOC103691310autism susceptibility gene 2 protein-like122715536427647641Rat
9071833LOC103693632paired immunoglobulin-like type 2 receptor beta122061345320616909Rat
9205257LOC103691091NHP2-like protein 1 pseudogene121928250019283755Rat
9348290LOC103693622uncharacterized LOC103693622121714456917149588Rat
9221590LOC103691323heterogeneous nuclear ribonucleoprotein Q pseudogene123062420930626524Rat
9271205LOC103691316uncharacterized LOC103691316122884306328844825Rat
9271754LOC103693636uncharacterized LOC103693636122537249725377457Rat
9310086LOC103693638gametogenetin-like122815519628160152Rat
9311981LOC103691302uncharacterized LOC103691302122548792125499152Rat
9318934LOC103693646uncharacterized LOC103693646123808179038082365Rat
9368177LOC103691088transcription elongation factor B polypeptide 1 pseudogene121925416019254590Rat
9235993LOC103691507zinc finger protein 471-like123062629730641417Rat
9242288LOC103691506claudin-4-like122478563724786293Rat
9386528LOC10369150960S ribosomal protein L7-like123325030533288256Rat
9337303LOC103690213vomeronasal type-2 receptor 116-like122113836121180302Rat
9379917LOC103691346uncharacterized LOC103691346123683545536838332Rat
9299204LOC103691030uncharacterized LOC103691030121587488715879100Rat
9342408LOC103690370leukosialin-like121826436018265744Rat
9342443LOC103693640MLV-related proviral Env polyprotein-like123042533230427226Rat
9261510LOC103693637ras-related protein Rap-1b pseudogene122189215421892761Rat
9303737LOC10369108560S ribosomal protein L34 pseudogene121922764519229018Rat
9263674LOC103691283uncharacterized LOC103691283122243407522434824Rat
9421625LOC103693628uncharacterized LOC103693628122015682520157855Rat
9461615LOC103691351uncharacterized LOC103691351123791050537912208Rat
9465680LOC103691295uncharacterized LOC103691295122431658324319209Rat
9331224LOC103691357uncharacterized LOC103691357123987469639875450Rat
9390395LOC103691343uncharacterized LOC103691343123388785633896540Rat
9474710LOC103693639heterogeneous nuclear ribonucleoprotein Q pseudogene123033430130335350Rat
9402189LOC103691309uncharacterized LOC103691309122742162227424633Rat
9443604LOC103691321interferon-induced transmembrane protein 1 pseudogene122989628029898079Rat
9447806LOC103693648wiskott-Aldrich syndrome protein family member 1-like123899548338998892Rat
9451108LOC103691320uncharacterized LOC103691320122938338729384947Rat
9451648LOC103693630paired immunoglobulin-like type 2 receptor beta122076036520763902Rat
11355720LOC108352442uncharacterized LOC108352442123290338532919782Rat
11371096LOC108352485MLV-related proviral Env polyprotein-like123032210530324506Rat
11367381Trnaf-gaa4transfer RNA phenylalanine (anticodon GAA) 4123662320136623273Rat
11466946LOC108352494vomeronasal type-2 receptor 116-like122124227821270561Rat
11472079LOC108352443uncharacterized LOC108352443123282760232837733Rat
11435442LOC108352438uncharacterized LOC108352438122673944526827888Rat
11457842LOC108352444uncharacterized LOC108352444123330768833308604Rat
11445374LOC108352447uncharacterized LOC108352447123965616139659140Rat
11363226LOC108352445uncharacterized LOC108352445123368746733694713Rat
11459746LOC108352434uncharacterized LOC108352434122375526823757561Rat
11438813LOC108352486heterogeneous nuclear ribonucleoprotein Q-like123032485730338434Rat
11429162LOC108352495endogenous retrovirus group K member 113 Gag polyprotein-like122092390820927332Rat
11371095LOC10835244660S ribosomal protein L21 pseudogene123949620939497178Rat
11440418Trnad-guc4transfer RNA aspartic acid (anticodon GUC) 4123662033836620409Rat
11440916LOC108352431uncharacterized LOC108352431122206412022076726Rat
11442159C12H7orf61chromosome 12 open reading frame, human C7orf61122174005721746236Rat
11442335LOC108352436uncharacterized LOC108352436122416284124166326Rat
11394808LOC108352496uncharacterized LOC108352496122014415220157855Rat
11405284LOC108352488uncharacterized LOC108352488123392105433975355Rat
11406627LOC10835250140S ribosomal protein S20-like123180506831805515Rat
11414185LOC108352500nucleophosmin-like121722590717226737Rat
11416827LOC108352428uncharacterized LOC108352428121969825519698729Rat
11420789LOC108352426uncharacterized LOC108352426121675336516763655Rat
11424350LOC108352437uncharacterized LOC108352437122537249725375302Rat
11425977Trnad-guc5transfer RNA aspartic acid (anticodon GUC) 5123662365636623727Rat
11384356LOC108352487heterogeneous nuclear ribonucleoprotein Q pseudogene123062545430648708Rat
11373727Trnaa-ugc4transfer RNA alanine (anticodon UGC) 4123662497336625044Rat
11407335LOC108352427uncharacterized LOC108352427121938760919394468Rat
11412175LOC108352450uncharacterized LOC108352450124097084740980813Rat
11392984LOC108352483small nuclear ribonucleoprotein Sm D1 pseudogene122221744922225577Rat
11405154LOC10835248440S ribosomal protein S14 pseudogene122507854125079054Rat
11500192LOC108352498uncharacterized LOC108352498122766025627667957Rat
11476410LOC108352481vomeronasal type-2 receptor 116-like122155597121565511Rat
11476624LOC108352489Y-linked testis-specific protein 1-like123481510934817152Rat
11502171LOC108352425uncharacterized LOC108352425121631172116354719Rat
11503226LOC108352429uncharacterized LOC108352429121987453219875006Rat
11505017LOC108352433uncharacterized LOC108352433122268418622698570Rat
11511026LOC108352432uncharacterized LOC108352432122214564322165080Rat
11499585LOC108352435uncharacterized LOC108352435122392834923938612Rat
11482332LOC10835243940S ribosomal protein S15a pseudogene122962714929627592Rat
11482657LOC10835248240S ribosomal protein S13 pseudogene122183660921837065Rat
11517466Trnaa-ugc3transfer RNA alanine (anticodon UGC) 3123661973836619809Rat
11517723LOC108352448uncharacterized LOC108352448123974142739748976Rat
11518793LOC108352441uncharacterized LOC108352441123163007331633904Rat
11492414LOC10835244040S ribosomal protein S25 pseudogene123064966830650107Rat
11492645LOC108348359paired immunoglobulin-like type 2 receptor beta122133683421373348Rat
11493793LOC108352502uncharacterized LOC108352502123422580134232672Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
44950D12Wox5116121571460915714743Ratregion
7387286rs8164304121583422515834225Ratregion
5077440RH139757198121584426415844461Ratregion
5059550BE097282181121596032515960505Ratregion
5079716RH141162186121596773515967920Ratregion
5056145RH144209101121596844115968541Ratregion
5040488RH128312186121597080915970994Ratregion
5074978RH138328140121597152815971667Ratregion
5054941RH143514267121597366015973926Ratregion
5075490RH138624150121597379215973941Ratregion
44954D12Got29279121601193516012213Ratregion
5078464RH140358187121602462116024807Ratregion
5046776RH131948184121606956616069749Ratregion
5032271AI414930135121611231416112448Ratregion
5084938AI236775145121611778716118487Ratregion
5057806BI277157205121617172016172112Ratregion
5051405AI595374154121619999716200150Ratregion
5499901UniSTS:235351167121620014416200310Ratregion
5029191RH143860165121620018516200349Ratregion
5040348RH128231197121628582416286020Ratregion
5045782RH131376209121638905216389260Ratregion
44956D12Got30158121655309716553251Ratregion
5044918RH130878153121671964916719801Ratregion
5500551RH135954170121681415216814321Ratregion
5031570AU047888216121688251716882732Ratregion
5067214AU047892255121688251716882771Ratregion
5040418RH128272208121690155516901762Ratregion
5502686Tmem184a0121691866516919327Ratregion
5072682RH136991220121692221816922437Ratregion
5501387Mafk588121692401816924605Ratregion
5058676BI284461184121692441516924599Ratregion
5504789UniSTS:2741821383121692595716927339Ratregion
5503986UniSTS:2571050121692635716927324Ratregion
5505466UniSTS:530587421121696321316963633Ratregion
5079044RH140702206121697464016974845Ratregion
5081016RH141916184121697470816974891Ratregion
5067182AU047911207121703113717031347Ratregion
33725D12Mit1259121711452117114770Ratregion
38094D12Rat47209121715998917160198Ratregion
5074172RH137863142121717363017173771Ratregion
5088139Uncx4.198121718217117182268Ratregion
7206646Uncx762121718266417183425Ratregion
5045500RH131214150121726326117263410Ratregion
5050558RH134125189121730915317309341Ratregion
5063520BE107745162121732132017321481Ratregion
5046828RH131978185121734356017343744Ratregion
5081388AI454263194121740295417403147Ratregion
5090261AU049646126121740337717403502Ratregion
5049310RH133407186121740471317404898Ratregion
62471D2Uia1271121740919117409457Ratregion
5046324RH131687211121746790017468110Ratregion
5039900RH127972197121746914117469337Ratregion
5025366RH128037199121746994417470142Ratregion
5052767RH142261173121748857917488751Ratregion
5044570RH130679182121748857917488760Ratregion
5499895UniSTS:235349192121748869117488882Ratregion
5065274BE121325159121750892117509079Ratregion
5038900RH127397183121754567417545856Ratregion
5502918Prkar1b751121771272817713478Ratregion
5047598RH132420208121771326817713475Ratregion
5050348RH134004190121773110417731293Ratregion
5060396AW525445170121773378317733952Ratregion
37272D12Rat28120121789565417895779Ratregion
5505116LOC783396150121790325117903400Ratregion
5045060RH130960182121791378717913969Ratregion
40408D12Rat91160121796086517961014Ratregion
5065714BF406262207121797978817979994Ratregion
5075028RH138357220121810586818106087Ratregion
5050418RH134045201121816622318166423Ratregion
5064902BE108699150121846600818466157Ratregion
5043508RH130065196121852103118521226Ratregion
5046526RH131804181121852711618527296Ratregion
5041142RH128686150121853460618534755Ratregion
44962D12Got36139121865463218654766Ratregion
5060020BF400282137121870028018700417Ratregion
5086535AW529990171121870918618709356Ratregion
5068848AU046888175121895067018950839Ratregion
5047648RH132448181121903035019030530Ratregion
5045860RH131420212121903184619032057Ratregion
5026390RH132022208121907434619074553Ratregion
5056215RH144250222121916360519163826Ratregion
44959D12Got34207121916758719167793Ratregion
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5035192BG381331154123145155931451712Ratregion
5064386BF399187219123145718831457406Ratregion
5058000BF386435194123145727131457464Ratregion
5029871BE097070160123157075331570912Ratregion
5029871BE097070160123158610231586261Ratregion
5082929BF390440164123160462831604791Ratregion
5061466BE105245151123160536731605517Ratregion
5506193UniSTS:498764430123162416631624595Ratregion
60025D12Got65197123162495231625148Ratregion
61278D12Arb5123172352831723732Ratregion
34729D12Mgh5132123172356531723688Ratregion
5505879UniSTS:49598892123175917731759268Ratregion
5502875Fzd10838123175926231760101Ratregion
5083691BG375003121123193654631936666Ratregion
5058858BF393753115123194782131947935Ratregion
5067328AU047820202123195882431959025Ratregion
36101D12Rat15152123197542431975590Ratregion
39844D12Rat76109123197981031979901Ratregion
5030821BE120393170123200212532002294Ratregion
5506288STS-Z413780123201443432014968Ratregion
5036825AU049323184123227073232270914Ratregion
44994D12Got74134123227074732270880Ratregion
41626D12Rat93132123228978232289887Ratregion
36125D12Rat14185123230502032305182Ratregion
5058378BG37680094123246216032462253Ratregion
7206382fj36f03.x10123251485532515719Ratregion
5065702BF406235157123253392232534078Ratregion
5034666BF390887174123267837632678549Ratregion
5089587AU04924498123273449132734588Ratregion
36119D12Rat94265123274850532748771Ratregion
5080714RH141739183123277295032773132Ratregion
5028452AA987064163123277305632773218Ratregion
5074846RH138252196123277419132774388Ratregion
5066040AA925378207123278046132780667Ratregion
5065922BE116124212123280640132806612Ratregion
5072420RH136839227123280774232807968Ratregion
44995D12Got69184123287169832871879Ratregion
5067610AU047642165123288447132884635Ratregion
5067578AU047661128123288447732884604Ratregion
5061782AW533444153123291624332916395Ratregion
5088717AU048735193123316129033161482Ratregion
5499633MARC_5817-5818:991939742:3300123318262533182924Ratregion
5058592BE102132180123329857333298755Ratregion
42966D12Rat95203123335318933353399Ratregion
5089613AU049259269123371743733717705Ratregion
5063204BF410495116123382980933829924Ratregion
5060954BF389547143123388233433882476Ratregion
44993D12Got72148123398690533987050Ratregion
40766D12Rat77100123400006234000159Ratregion
5067026AU048009127123402933034029456Ratregion
5088269AU048467127123405152134051647Ratregion
42967D12Rat106206123422778834227989Ratregion
37334D12Rat46142123423293034233087Ratregion
44992D12Got71270123426480534265074Ratregion
45001D12Got70226123426486334265088Ratregion
35126D12Rat16170123426490634265075Ratregion
5088703AU04872683123431762534317707Ratregion
44991D12Got73271123434381934344089Ratregion
5068766AU046945184123474710134747271Ratregion
7205796D5S1561E91123590543435905524Ratregion
720584210STS02221123590593635906156Ratregion
7205918RH17921243123590604035906282Ratregion
1629355D12Mco40123594831235948510Ratregion
1629355D12Mco40123596431335964504Ratregion
35433D12Rat17149123596436035964508Ratregion
5090141AU049574241123604497836045204Ratregion
40668D12Rat78216123627694936277154Ratregion
60031D12Got99172123630854336308714Ratregion
5041964RH129160197123651240136512598Ratregion
5078542RH140404143123657090336571045Ratregion
5077120RH139572218123657090336571120Ratregion
5056977RH144689176123657204436572219Ratregion
5071904RH135352195123657633936576533Ratregion
5033885RH140486172123661381136613982Ratregion
5045534RH131233196123663411536634310Ratregion
5050998RH134379214123664414436644357Ratregion
5504869ha27170123666495636666392Ratregion
5088305AU048490237123667652736676763Ratregion
5026010RH130563215123673757636737790Ratregion
5051170RH134480188123676115736761344Ratregion
33955D1Mit22124123681496536815102Ratregion
5030123BE098792203123703343337033635Ratregion
38084D12Rat96214123706260837062809Ratregion
5060418BE110007168123710531037105477Ratregion
5074698RH138167126123723762737237753Ratregion
7206766ha30420123730136137302538Ratregion
5035885PMC280674P1715123730379637304510Ratregion
5034159RH141592185123736573637365920Ratregion
5080924RH141862199123736762137367819Ratregion
5060602BE110564160123736803537368194Ratregion
5030179BF395959124123740495637405079Ratregion
5090105AU049553203123740837937408581Ratregion
5027036RH134486198123742778937427985Ratregion
5059878BI279065181123745206637452246Ratregion
5073340RH137380150123745305037453199Ratregion
5059022BF387385184123746392237464105Ratregion
5502345RH124557175123747129037471464Ratregion
5052573RH125644234123747129737471530Ratregion
37830D12Rat36200123752188437522089Ratregion
5064982BE108813170123752321337523382Ratregion
41826D12Rat107223123755388037554080Ratregion
5053745RH142826173123755664137556813Ratregion
5085387BM390241201123758299337583193Ratregion
5083203BI275304166123764857437648739Ratregion
5042060RH1292150123765354237653738Ratregion
5039496RH127739195123767724137677435Ratregion
5063564BI289921203123772763037727832Ratregion
5047264RH132227181123776987337770053Ratregion
36795D12Rat24174123780070237800875Ratregion
5056877RH144632157123785137437851530Ratregion
5057636BF392370170123786316437863333Ratregion
5058666BE102291152123787755337877704Ratregion
5059396AW530578166123789097037891135Ratregion
5045720RH131340211123790364437903854Ratregion
5076014RH138929192123790857537908766Ratregion
5085736BF388086155123798605937986213Ratregion
5034199RH141742194123802176538021958Ratregion
5076680RH139316170123802257638022745Ratregion
5050534RH134112168123802317238023339Ratregion
5085760BM390895181123806245138062631Ratregion
5042714RH129601215123809576738095981Ratregion
5079176RH140780182123809588238096063Ratregion
5055147RH143632261123809823438098494Ratregion
5062016BI294736218123816176938161986Ratregion
5054575RH143303219123827466438274882Ratregion
5502733RSRC2168123829144138291608Ratregion
5499837UniSTS:234929717123829144638292162Ratregion
5047040RH132099186123832691138327096Ratregion
5028621RH118296196123836998638370181Ratregion
39060D12Rat30201123840880038409001Ratregion
5050078RH133849206123845140838451613Ratregion
5041500RH128892212123845223038452441Ratregion
5051397AW554476125123848354438483668Ratregion
5038888RH127390196123848412738484322Ratregion
5062190BF397544204123849871438498917Ratregion
5072872RH137103185123856472838564912Ratregion
5051399AW22870094123856480638564899Ratregion
5076446RH139180139123866070338660841Ratregion
5030445BE106487158123870896338709120Ratregion
5083619BI276461171123878610538786279Ratregion
5077368RH139716192123878656338786754Ratregion
5500408GDB:45513084123883375938833842Ratregion
5079492RH141029193123883967938839871Ratregion
5061348BF396285123123884327638843398Ratregion
5502313RH1244050123884435338844563Ratregion
5054003RH142974126123887833538878460Ratregion
5058324BF41930790123897738138977470Ratregion
5078598RH14043691123897738638977476Ratregion
44997D12Got78173123901079639010968Ratregion
8693216rs106542192123910951539109515Ratregion
5031143AA925036117123916158139161697Ratregion
5040500RH128319191123916449139164681Ratregion
5086363AA874832191123924246239242652Ratregion
5056395RH144353115123925549539255609Ratregion
10125DXMgh7230123928233939282571Ratregion
5065990BE116442175123929834739298521Ratregion
5062594BE106902162123930243339302594Ratregion
5047542RH132387210123930496439305173Ratregion
5073316RH137366190123930805539308244Ratregion
5067470AU047724238123933116539331402Ratregion
5041176RH128706151123935238639352536Ratregion
5076326RH139111134123939195039392083Ratregion
5054907RH143493136123939195139392086Ratregion
5033301RH138330157123940043939400583Ratregion
38108D12Rat50244123942162339421866Ratregion
5066450AU048349132123950092739501058Ratregion
5076124RH138993214123950706939507282Ratregion
5082125BF409796221123950879039509010Ratregion
5500847G15902192123960005239600243Ratregion
5037065D12S2026337123960296439603300Ratregion
5055597RH143892132123961251739612660Ratregion
5075082RH138388172123964169039641861Ratregion
5065460BF412122151123966037139660521Ratregion
5026902RH133976195123966363939663833Ratregion
5028257D5Mit118157123968714439687300Ratregion
5043960RH130330167123968860039688766Ratregion
5027303AW049835110123969057139690680Ratregion
5035356AW529993150123972932439729473Ratregion
5055615RH143903170123972986639730035Ratregion
5072734RH137022169123973085339731021Ratregion
5081414AI502108184123973189939732082Ratregion
5058924BF387255151123975838539758535Ratregion
5506729G44856274123976561139765884Ratregion
5033941RH140698187123981100739811193Ratregion
5045350RH131127213123982068939820908Ratregion
5043680RH130165201123982159539821795Ratregion
5030479BF403268212123982372439823935Ratregion
5028833RH142503121123982635239826472Ratregion
5068860AU046881284123983150439831782Ratregion
5030825BE120455158123989143639891593Ratregion
5087171BQ207717197123991058239910778Ratregion
44998D12Got79153123991765539917807Ratregion
5041176RH128706151123992249839922648Ratregion
40454D12Rat100133123995010139950233Ratregion
5060624BE110694159123995891639959073Ratregion
36490D12Rat18161124021591240216072Ratregion
5079586RH141086211124022076740220977Ratregion
5041982RH129170158124022536340226002Ratregion
5054217RH143097179124022819540228373Ratregion
5499605MARC_2373-2374:991932707:1334124026659240267721Ratregion
5027301AW544490124124026668040266803Ratregion
5073564RH137509217124027410140274317Ratregion
5501922MARC_17487-17488:1030377680:10124030068540302210Ratregion
41786D12Rat101106124033110940331214Ratregion
5042616RH129542194124038193340382126Ratregion
40112D12Rat84167124043556140435727Ratregion
5045912RH131450194124046022740460420Ratregion
5059120BI278447163124049858640498746Ratregion
5076702RH139329123124052875140529216Ratregion
5059892BF388151181124053640240536582Ratregion
5050706RH134211220124055077840550997Ratregion
5062286BF403047149124055777740557925Ratregion
5090531AU049807198124061345540613652Ratregion
41156D12Rat79221124061778340618007Ratregion
5041048RH128633220124062510340625770Ratregion
5042216RH129307198124062557340625770Ratregion
5084352AA945300202124062825540628456Ratregion
5045148RH131011183124070918540709367Ratregion
5029387RH144598150124074848640748635Ratregion
5085828BF388170183124075313240753314Ratregion
1634514D12Got214178124075511340755290Ratregion
7206126UniSTS:532167946124077989640780841Ratregion
5035498AW533080180124078845740788636Ratregion
5062052BI294823189124081004640810234Ratregion
60028D12Got8089124081830340818390Ratregion
39332D12Rat52181124084240540842549Ratregion
5026898RH133958187124087773740878149Ratregion
7206280Ptpn11148124092294640923510Ratregion
5052075RH94825207124095253940952745Ratregion
5032211D84372133124095255140952683Ratregion
5041094RH128659184124095575440955937Ratregion
60029D12Got81192124108627041086461Ratregion
5047584RH132412182124114955041149731Ratregion
5044038RH130374192124116713541167326Ratregion
5071766RH135272186124117965741179842Ratregion
5025864RH129983150124121124041211389Ratregion
41962D12Arb6290124121344841213801Ratregion
5089401AU049134152124121363241213783Ratregion
34070D12Mgh7138124122897541229112Ratregion
60027D12Got75285124123494241235223Ratregion
5047584RH132412182124127221241272393Ratregion
5057094AI454805188124129027641290463Ratregion
41962D12Arb6290124129137841291738Ratregion
5089401AU049134152124129139641291554Ratregion
Position Markers

Flank 1: (D12Wox5)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21213,635,523 - 13,635,658 (+)MAPPER
Rnor_6.01215,714,609 - 15,714,743NCBI
Rnor_5.01217,721,341 - 17,721,475UniSTS
Celera1215,396,902 - 15,397,046UniSTS
RH 3.4 Map12175.8RGD
RH 3.4 Map12175.8UniSTS
RH 2.0 Map12146.0RGD
Cytogenetic Map12q11UniSTS
Peak: (D12Wox10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21220,894,380 - 20,894,469 (+)MAPPER
Rnor_6.01223,941,563 - 23,941,651NCBI
Rnor_5.01225,938,815 - 25,938,903UniSTS
RGSC_v3.41222,021,414 - 22,021,502UniSTS
RGSC_v3.41222,021,413 - 22,021,502RGD
RGSC_v3.11222,008,677 - 22,008,766RGD
Celera1222,657,146 - 22,657,234UniSTS
RH 3.4 Map12299.1UniSTS
RH 3.4 Map12299.1RGD
RH 2.0 Map12221.8RGD
Cytogenetic Map12q12UniSTS
Flank 2: (D12Arb6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21235,682,559 - 35,682,913 (+)MAPPER
mRatBN7.21235,682,559 - 35,682,913 (-)MAPPER
Rnor_6.01241,291,378 - 41,291,738NCBI
Rnor_6.01241,213,448 - 41,213,801NCBI
Rnor_5.01243,150,549 - 43,150,909UniSTS
RGSC_v3.41236,818,780 - 36,819,134RGD
RGSC_v3.41236,894,446 - 36,894,750RGD
RGSC_v3.41236,818,781 - 36,819,134UniSTS
RGSC_v3.41236,894,447 - 36,894,750UniSTS
RGSC_v3.11236,757,835 - 36,758,138RGD
Celera1237,422,909 - 37,423,212UniSTS
Celera1237,346,026 - 37,346,376UniSTS
RH 3.4 Map12618.9UniSTS
RH 3.4 Map12618.9RGD
RH 2.0 Map12466.8RGD
SHRSP x BN Map1244.35RGD
Cytogenetic Map12 RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12122650917Rat
10450854Stl34Serum triglyceride level QTL 343.50.05blood LDL triglyceride amount (VT:0010699)blood lipoprotein triglyceride level (CMO:0002685)12122853017Rat
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12123035872Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123758197Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12130749723Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12136919844Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12138334225Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)1215081045150810Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1215081045150810Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)1215081045150810Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)1215081045150810Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)1215081045150810Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)1215081045150810Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)1215081045150810Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)1249257845492578Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12247568747475687Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12251344247513442Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12251344247513442Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12421005149210051Rat
1600391Edcs2Endometrial carcinoma susceptibility QTL23.50.01uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)12824960820590080Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12895459327911196Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6922362652716770Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12922362652716770Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12922362652716770Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12922362652716770Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12922362652716770Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12922362652716770Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12922363052716770Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12978983452716770Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121017588931975590Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)121025689031723732Rat
1300157Rf21Renal function QTL 214.4renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)121176499537522089Rat
1331786Kidm11Kidney mass QTL 113.571kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)121312721127285590Rat
1331755Bp219Blood pressure QTL 2193.041arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121312721131723688Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121312721150320041Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121441977552716770Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)121502198652716770Rat
7204484Bp358Blood pressure QTL 3580.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121508558522283507Rat
61416Pia4Pristane induced arthritis QTL 48.4joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)121571460935964508Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121571460941291738Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121590890052716770Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121590890052716770Rat
61443Btemp2Thermal response to stress QTL 23.30.000094body temperature trait (VT:0005535)core body temperature (CMO:0001036)121711477023839390Rat
631543Bp83Blood pressure QTL 835.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121718558044098244Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)121796086538409001Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121834247752716770Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121834247752716770Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121872904352716770Rat
1549902Bp269Blood pressure QTL 269arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121875259352716770Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101875259352716770Rat
2306789Ean6Experimental allergic neuritis QTL 64.9nervous system integrity trait (VT:0010566)experimental autoimmune neuritis severity score (CMO:0001528)122265070227190240Rat
737822Alc10Alcohol consumption QTL 102.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)122265070245946937Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)122265070248598906Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)122265070252716770Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)122265072141291738Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)122287629743799153Rat
631521Pia12Pristane induced arthritis QTL 128.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)122324124626710128Rat
11530002Bss119Bone structure and strength QTL 11916.390.00000000000000004lumbar vertebra area (VT:0010570)lumbar vertebra area (CMO:0001688)122392065624394383Rat
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)122490659052716770Rat
7411643Foco20Food consumption QTL 200.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)122609884552716770Rat
70169Eae13Experimental allergic encephalomyelitis QTL 130.032nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)122719024042196641Rat
1331763Wbc2White blood cell count QTL 23.162leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)122728547336161779Rat
8693658Alc33Alcohol consumption QTL 332.10.68drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)122911360949560679Rat
8693635Alc28Alcohol consumption QTL 282.70.439drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)122911360950757185Rat
1556747Calcic1Intracellular calcium level QTL 13.6platelet calcium amount (VT:0010500)platelet intracellular calcium level (CMO:0000922)123172356547433663Rat
1300175Cm5Cardiac mass QTL 53.78heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)123172356551955754Rat
1600386Calcic2Intracellular calcium level QTL 20.001platelet physiology trait (VT:0005464)platelet intracellular calcium level (CMO:0000922)123172356552716770Rat
1331787Rf41Renal function QTL 412.998kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)123172368845946802Rat
631829Alc6Alcohol consumption QTL 64.7consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)123228978243305579Rat
1300162Bp188Blood pressure QTL 1883.19arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)123752188451955754Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Cia12


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Cia12  Collagen induced arthritis QTL 12    Type II Collagen induced arthritis QTL 12  Name updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_gene whole genome analysis using PGMapper revealed Flt1, Epo, Ncf1 as RA associated genes and Ncf1 as RA associated polymorphism either in coding or regulatory region 2300074
qtl_gene 461 known and 137 novel genes were found in an analysis based on PubMed and OMIM data 2307198
qtl_general additively associates with the increase of arthritis severity than that of BN 61066