Naa25 (N(alpha)-acetyltransferase 25, NatB auxiliary subunit) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Naa25 (N(alpha)-acetyltransferase 25, NatB auxiliary subunit) Rattus norvegicus
Analyze
Symbol: Naa25
Name: N(alpha)-acetyltransferase 25, NatB auxiliary subunit
RGD ID: 1305685
Description: Predicted to enable acetyltransferase activator activity. Predicted to be involved in cytoskeleton organization. Located in cytoplasm. Orthologous to human NAA25 (N-alpha-acetyltransferase 25, NatB auxiliary subunit); INTERACTS WITH (+)-schisandrin B; 2,2',4,4'-Tetrabromodiphenyl ether; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: liver regeneration-related protein LRRGT00164; LOC360811; LRRGT00164; Mdm20; mitochondrial distribution and morphology protein 20; N-alpha-acetyltransferase 25, NatB auxiliary subunit; N-terminal acetyltransferase B complex subunit MDM20; N-terminal acetyltransferase B complex subunit NAA25; natB complex subunit MDM20; RGD1305685; similar to hypothetical protein FLJ13089
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81240,758,909 - 40,811,192 (-)NCBIGRCr8
mRatBN7.21235,098,256 - 35,150,498 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1235,098,075 - 35,150,467 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1236,271,007 - 36,323,315 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01236,882,214 - 36,934,524 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01235,934,653 - 35,986,962 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01240,628,005 - 40,680,421 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1240,628,005 - 40,680,397 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01242,495,120 - 42,547,564 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41236,233,484 - 36,286,678 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11236,096,871 - 36,150,066 (-)NCBI
Celera1236,762,841 - 36,815,235 (-)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IDA,ISO)
cytosol  (IEA,ISO)
Golgi apparatus  (IEA,ISO)
NatB complex  (IBA,IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Spatio-temporal expression pattern of the NatB complex, Nat5/Mdm20 in the developing mouse brain: implications for co-operative versus non-co-operative actions of Mdm20 and Nat5. Ohyama K, etal., Gene Expr Patterns. 2012 Jan-Feb;12(1-2):36-45. doi: 10.1016/j.gep.2011.11.001. Epub 2011 Nov 10.
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:24358196  


Genomics

Comparative Map Data
Naa25
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81240,758,909 - 40,811,192 (-)NCBIGRCr8
mRatBN7.21235,098,256 - 35,150,498 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1235,098,075 - 35,150,467 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1236,271,007 - 36,323,315 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01236,882,214 - 36,934,524 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01235,934,653 - 35,986,962 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01240,628,005 - 40,680,421 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1240,628,005 - 40,680,397 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01242,495,120 - 42,547,564 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41236,233,484 - 36,286,678 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11236,096,871 - 36,150,066 (-)NCBI
Celera1236,762,841 - 36,815,235 (-)NCBICelera
Cytogenetic Map12q16NCBI
NAA25
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812112,026,689 - 112,108,783 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12112,026,689 - 112,108,796 (-)EnsemblGRCh38hg38GRCh38
GRCh3712112,464,493 - 112,546,587 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612110,948,876 - 111,030,980 (-)NCBINCBI36Build 36hg18NCBI36
Celera12112,089,963 - 112,172,115 (-)NCBICelera
Cytogenetic Map12q24.13NCBI
HuRef12109,477,779 - 109,559,771 (-)NCBIHuRef
CHM1_112112,432,742 - 112,514,869 (-)NCBICHM1_1
T2T-CHM13v2.012112,003,594 - 112,085,687 (-)NCBIT2T-CHM13v2.0
Naa25
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395121,535,977 - 121,580,612 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5121,535,999 - 121,582,441 (+)EnsemblGRCm39 Ensembl
GRCm385121,397,914 - 121,442,549 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5121,397,936 - 121,444,378 (+)EnsemblGRCm38mm10GRCm38
MGSCv375121,847,991 - 121,890,122 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365121,658,599 - 121,700,730 (+)NCBIMGSCv36mm8
Celera5118,487,719 - 118,529,976 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map561.79NCBI
Naa25
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554828,583,802 - 8,660,501 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554828,583,802 - 8,659,626 (-)NCBIChiLan1.0ChiLan1.0
NAA25
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210120,117,990 - 120,200,807 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112120,114,384 - 120,197,200 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012109,623,532 - 109,706,094 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112113,017,371 - 113,101,415 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12113,020,213 - 113,100,935 (-)Ensemblpanpan1.1panPan2
NAA25
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1269,620,812 - 9,699,671 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl269,623,575 - 9,699,139 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha269,739,399 - 9,818,044 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0269,858,552 - 9,937,149 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl269,858,851 - 9,937,091 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1269,835,630 - 9,914,223 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0269,899,033 - 9,977,629 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0269,946,410 - 10,025,029 (-)NCBIUU_Cfam_GSD_1.0
Naa25
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118154,865,496 - 154,940,195 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365584,539,042 - 4,613,925 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365584,541,097 - 4,613,923 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NAA25
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1439,606,882 - 39,682,470 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11439,606,799 - 39,682,787 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21442,103,192 - 42,174,847 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NAA25
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111107,258,813 - 107,345,333 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl11107,258,810 - 107,345,714 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037137,745,973 - 137,829,697 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Naa25
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474720,082,907 - 20,160,107 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474720,082,870 - 20,159,488 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Naa25
265 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:33
Count of miRNA genes:29
Interacting mature miRNAs:31
Transcripts:ENSRNOT00000048984
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)121914436246669029Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121983578938193007Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411643Foco20Food consumption QTL 200.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)122032881946669029Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)121961087046669029Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961087042828880Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121319815746669029Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101318273646669029Rat
1300162Bp188Blood pressure QTL 1883.19arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)123210317445899022Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
737822Alc10Alcohol consumption QTL 102.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)121961087040218516Rat
70169Eae13Experimental allergic encephalomyelitis QTL 130.032nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)122413920236638073Rat
1549902Bp269Blood pressure QTL 269arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121318273646669029Rat
1600386Calcic2Intracellular calcium level QTL 20.001platelet physiology trait (VT:0005464)platelet intracellular calcium level (CMO:0000922)122806443346669029Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
1300175Cm5Cardiac mass QTL 53.78heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)122806443345899022Rat
1556747Calcic1Intracellular calcium level QTL 13.6platelet calcium amount (VT:0010500)platelet intracellular calcium level (CMO:0000922)122806443340130419Rat
631829Alc6Alcohol consumption QTL 64.7consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)122860752637691617Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121235161946669029Rat
1331787Rf41Renal function QTL 412.998kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)122806455740218380Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121047413746669029Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382545055165Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121363552335682913Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121281238546669029Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961088935682913Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121047413746669029Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
631543Bp83Blood pressure QTL 835.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121555082638478808Rat

Markers in Region
RH140786  
Rat AssemblyChrPosition (strand)SourceJBrowse
RH 3.4 Map12619.5UniSTS
Cytogenetic Map12q16UniSTS
AA945300  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21235,098,324 - 35,098,526 (+)MAPPERmRatBN7.2
Rnor_6.01240,628,255 - 40,628,456NCBIRnor6.0
Rnor_5.01242,495,370 - 42,495,571UniSTSRnor5.0
RGSC_v3.41236,233,734 - 36,233,935UniSTSRGSC3.4
Celera1236,763,091 - 36,763,292UniSTS
RH 3.4 Map12610.1UniSTS
Cytogenetic Map12q16UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000048984   ⟹   ENSRNOP00000049175
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1235,098,075 - 35,150,467 (-)Ensembl
Rnor_6.0 Ensembl1240,628,005 - 40,680,374 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000080418   ⟹   ENSRNOP00000075085
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1235,098,763 - 35,150,467 (-)Ensembl
Rnor_6.0 Ensembl1240,630,817 - 40,680,397 (-)Ensembl
RefSeq Acc Id: NM_001413582   ⟹   NP_001400511
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81240,758,909 - 40,811,145 (-)NCBI
mRatBN7.21235,098,256 - 35,150,498 (-)NCBI
RefSeq Acc Id: XM_039089597   ⟹   XP_038945525
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81240,774,152 - 40,811,191 (-)NCBI
mRatBN7.21235,113,499 - 35,150,478 (-)NCBI
RefSeq Acc Id: XM_039089598   ⟹   XP_038945526
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81240,775,248 - 40,811,192 (-)NCBI
mRatBN7.21235,114,595 - 35,150,478 (-)NCBI
RefSeq Acc Id: XM_063271535   ⟹   XP_063127605
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81240,762,196 - 40,811,190 (-)NCBI
RefSeq Acc Id: XR_005491649
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81240,774,154 - 40,811,191 (-)NCBI
mRatBN7.21235,113,500 - 35,150,478 (-)NCBI
Ensembl Acc Id: ENSRNOP00000075085   ⟸   ENSRNOT00000080418
Ensembl Acc Id: ENSRNOP00000049175   ⟸   ENSRNOT00000048984
RefSeq Acc Id: XP_038945525   ⟸   XM_039089597
- Peptide Label: isoform X2
- UniProtKB: A6J1F2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038945526   ⟸   XM_039089598
- Peptide Label: isoform X2
- UniProtKB: A6J1F2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001400511   ⟸   NM_001413582
- UniProtKB: Q6QI44 (UniProtKB/Swiss-Prot),   A0A0G2K9Q3 (UniProtKB/TrEMBL),   A6J1F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127605   ⟸   XM_063271535
- Peptide Label: isoform X1
- UniProtKB: Q6QI44 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6QI44-F1-model_v2 AlphaFold Q6QI44 1-970 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698656
Promoter ID:EPDNEW_R9181
Type:initiation region
Name:Naa25_1
Description:N-acetyltransferase 25, NatB auxiliary subunit
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01240,680,380 - 40,680,440EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305685 AgrOrtholog
BioCyc Gene G2FUF-19208 BioCyc
Ensembl Genes ENSRNOG00000001350 Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000048984.3 UniProtKB/Swiss-Prot
  ENSRNOT00000080418.2 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.1040 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro N-acetylTrfase_B_cplx_non-cat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 360811 ENTREZGENE
PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR22767:SF3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam NatB_MDM20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Naa25 PhenoGen
PROSITE TPR_REGION UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000001350 RatGTEx
Superfamily-SCOP SSF48452 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2K9Q3 ENTREZGENE, UniProtKB/TrEMBL
  A6J1F1 ENTREZGENE, UniProtKB/TrEMBL
  A6J1F2 ENTREZGENE, UniProtKB/TrEMBL
  NAA25_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-04-23 Naa25  N(alpha)-acetyltransferase 25, NatB auxiliary subunit  RGD1305685  similar to hypothetical protein FLJ13089  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 RGD1305685  similar to hypothetical protein FLJ13089  RGD1305685_predicted  similar to hypothetical protein FLJ13089 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1305685_predicted  similar to hypothetical protein FLJ13089 (predicted)  LOC360811_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC360811_predicted  similar to hypothetical protein FLJ13089 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL