Styxl1 (serine/threonine/tyrosine interacting-like 1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Styxl1 (serine/threonine/tyrosine interacting-like 1) Rattus norvegicus
Analyze
Symbol: Styxl1
Name: serine/threonine/tyrosine interacting-like 1
RGD ID: 1305845
Description: Predicted to enable protein phosphatase binding activity; protein phosphatase inhibitor activity; and pseudophosphatase activity. Predicted to be involved in several processes, including negative regulation of phosphoprotein phosphatase activity; negative regulation of stress granule assembly; and positive regulation of intrinsic apoptotic signaling pathway. Predicted to be active in mitochondrion. Orthologous to human STYXL1 (serine/threonine/tyrosine interacting like 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4,6-trinitrotoluene; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Dusp24; LOC360792; map kinase phosphatase-like protein MK-STYX; MGC112640; RGD1305845; serine/threonine/tyrosine-interacting-like protein 1; similar to map kinase phosphatase-like protein MK-STYX
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21220,907,410 - 20,940,232 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1220,907,435 - 20,939,752 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1222,049,543 - 22,081,470 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01222,661,961 - 22,693,904 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01221,728,423 - 21,760,363 (+)NCBIRnor_WKY
Rnor_6.01223,954,563 - 23,987,155 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1223,954,574 - 23,987,271 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01225,951,823 - 25,984,407 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41222,034,611 - 22,067,320 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11222,021,775 - 22,054,432 (+)NCBI
Celera1222,670,342 - 22,702,380 (+)NCBICelera
Cytogenetic Map12q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
mitochondrion  (IBA,ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:20180778   PMID:21262771   PMID:23163895   PMID:24709986   PMID:25479605   PMID:29250526  


Genomics

Comparative Map Data
Styxl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21220,907,410 - 20,940,232 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1220,907,435 - 20,939,752 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1222,049,543 - 22,081,470 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01222,661,961 - 22,693,904 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01221,728,423 - 21,760,363 (+)NCBIRnor_WKY
Rnor_6.01223,954,563 - 23,987,155 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1223,954,574 - 23,987,271 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01225,951,823 - 25,984,407 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41222,034,611 - 22,067,320 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11222,021,775 - 22,054,432 (+)NCBI
Celera1222,670,342 - 22,702,380 (+)NCBICelera
Cytogenetic Map12q12NCBI
STYXL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38775,996,337 - 76,048,000 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl775,996,338 - 76,048,004 (-)EnsemblGRCh38hg38GRCh38
GRCh37775,625,655 - 75,677,318 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36775,463,591 - 75,515,257 (-)NCBINCBI36Build 36hg18NCBI36
Build 34775,270,306 - 75,321,972NCBI
Celera770,494,194 - 70,545,856 (-)NCBICelera
Cytogenetic Map7q11.23NCBI
HuRef770,712,490 - 70,763,886 (-)NCBIHuRef
CHM1_1775,555,700 - 75,607,308 (-)NCBICHM1_1
T2T-CHM13v2.0777,283,904 - 77,335,536 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2774,958,719 - 75,010,385 (-)NCBI
Styxl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395135,776,074 - 135,807,277 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5135,776,074 - 135,807,239 (-)EnsemblGRCm39 Ensembl
GRCm385135,747,220 - 135,778,424 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5135,747,220 - 135,778,385 (-)EnsemblGRCm38mm10GRCm38
MGSCv375136,223,519 - 136,254,161 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365136,032,276 - 136,062,918 (-)NCBIMGSCv36mm8
Celera5132,754,828 - 132,785,661 (-)NCBICelera
Cytogenetic Map5G2NCBI
Styxl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545614,755,637 - 14,819,125 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545614,755,516 - 14,819,326 (-)NCBIChiLan1.0ChiLan1.0
STYXL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1782,446,382 - 82,497,773 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl782,446,562 - 82,497,769 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0767,973,316 - 68,024,986 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
STYXL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.167,323,911 - 7,389,878 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl67,316,477 - 7,389,842 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha69,020,659 - 9,085,208 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.067,144,714 - 7,209,422 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl67,137,263 - 7,210,023 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.167,114,088 - 7,178,693 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.067,077,554 - 7,142,138 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.067,240,794 - 7,305,560 (-)NCBIUU_Cfam_GSD_1.0
Styxl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344131,766,173 - 131,827,909 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365432,208,669 - 2,269,264 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STYXL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl310,132,093 - 10,205,179 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1310,131,508 - 10,212,611 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
STYXL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12810,239,381 - 10,294,741 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2810,240,091 - 10,277,112 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660706,127,160 - 6,182,184 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Styxl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474014,797,868 - 14,837,668 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474014,797,853 - 14,837,690 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Styxl1
104 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:38
Count of miRNA genes:33
Interacting mature miRNAs:36
Transcripts:ENSRNOT00000046343
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12122591684Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123297788Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12134851688Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12844949028302290Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
1300157Rf21Renal function QTL 214.4renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)12931821632103380Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121047413746669029Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121047413746669029Rat
1331786Kidm11Kidney mass QTL 113.571kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)121107382524234895Rat
1331755Bp219Blood pressure QTL 2193.041arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382528064557Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382545055165Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121235161946669029Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121281238546669029Rat
1549902Bp269Blood pressure QTL 269arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121318273646669029Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101318273646669029Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121319815746669029Rat
61416Pia4Pristane induced arthritis QTL 48.4joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)121363552330827399Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121363552335682913Rat
631543Bp83Blood pressure QTL 835.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121555082638478808Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)121587265332974238Rat
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)121914436246669029Rat
2306789Ean6Experimental allergic neuritis QTL 64.9nervous system integrity trait (VT:0010566)experimental autoimmune neuritis severity score (CMO:0001528)121961087024139202Rat
737822Alc10Alcohol consumption QTL 102.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)121961087040218516Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961087042828880Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)121961087046669029Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961088935682913Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121983578938193007Rat
631521Pia12Pristane induced arthritis QTL 128.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)122025941723672083Rat
7411643Foco20Food consumption QTL 200.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)122032881946669029Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 2 1 20 4
Low 3 43 55 41 19 41 8 9 74 34 21 7 8
Below cutoff 2

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000046343   ⟹   ENSRNOP00000049678
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1220,907,435 - 20,939,749 (+)Ensembl
Rnor_6.0 Ensembl1223,954,574 - 23,987,271 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000102480   ⟹   ENSRNOP00000093395
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1220,912,726 - 20,939,752 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000116883   ⟹   ENSRNOP00000095292
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1220,907,435 - 20,939,749 (+)Ensembl
RefSeq Acc Id: NM_001037788   ⟹   NP_001032877
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21220,907,579 - 20,939,749 (+)NCBI
Rnor_6.01223,954,760 - 23,987,102 (+)NCBI
Rnor_5.01225,951,823 - 25,984,407 (+)NCBI
RGSC_v3.41222,034,611 - 22,067,320 (+)RGD
Celera1222,670,342 - 22,702,380 (+)RGD
Sequence:
RefSeq Acc Id: XM_006249181   ⟹   XP_006249243
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21220,907,410 - 20,940,232 (+)NCBI
Rnor_6.01223,954,563 - 23,987,155 (+)NCBI
Rnor_5.01225,951,823 - 25,984,407 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001032877 (Get FASTA)   NCBI Sequence Viewer  
  XP_006249243 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH98678 (Get FASTA)   NCBI Sequence Viewer  
  EDM13355 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001032877   ⟸   NM_001037788
- UniProtKB: G3V9J5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006249243   ⟸   XM_006249181
- Peptide Label: isoform X1
- UniProtKB: G3V9J5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000049678   ⟸   ENSRNOT00000046343
RefSeq Acc Id: ENSRNOP00000093395   ⟸   ENSRNOT00000102480
RefSeq Acc Id: ENSRNOP00000095292   ⟸   ENSRNOT00000116883
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-G3V9J5-F1-model_v2 AlphaFold G3V9J5 1-321 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698548
Promoter ID:EPDNEW_R9071
Type:multiple initiation site
Name:Styxl1_1
Description:serine/threonine/tyrosine interacting-like 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01223,954,632 - 23,954,692EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305845 AgrOrtholog
BioCyc Gene G2FUF-19630 BioCyc
Ensembl Genes ENSRNOG00000023366 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000049678 ENTREZGENE
  ENSRNOP00000049678.3 UniProtKB/TrEMBL
  ENSRNOP00000093395.1 UniProtKB/TrEMBL
  ENSRNOP00000095292.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000046343 ENTREZGENE
  ENSRNOT00000046343.5 UniProtKB/TrEMBL
  ENSRNOT00000102480.1 UniProtKB/TrEMBL
  ENSRNOT00000116883.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.250.10 UniProtKB/TrEMBL
  3.90.190.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7382696 IMAGE-MGC_LOAD
InterPro Dual-sp_phosphatase_cat-dom UniProtKB/TrEMBL
  Dual-sp_phosphatase_subgr_cat UniProtKB/TrEMBL
  Prot-tyrosine_phosphatase-like UniProtKB/TrEMBL
  Rhodanese-like UniProtKB/TrEMBL
  Rhodanese-like_dom_sf UniProtKB/TrEMBL
KEGG Report rno:360792 UniProtKB/TrEMBL
MGC_CLONE MGC:112640 IMAGE-MGC_LOAD
NCBI Gene 360792 ENTREZGENE
Pfam DSPc UniProtKB/TrEMBL
PhenoGen Styxl1 PhenoGen
PROSITE TYR_PHOSPHATASE_DUAL UniProtKB/TrEMBL
SMART DSPc UniProtKB/TrEMBL
  RHOD UniProtKB/TrEMBL
Superfamily-SCOP Rhodanese-like UniProtKB/TrEMBL
  SSF52799 UniProtKB/TrEMBL
UniProt A0A8I6AT77_RAT UniProtKB/TrEMBL
  A0A8I6GKM9_RAT UniProtKB/TrEMBL
  G3V9J5 ENTREZGENE, UniProtKB/TrEMBL
  Q4G076_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-03-30 Styxl1  serine/threonine/tyrosine interacting-like 1  RGD1305845  similar to map kinase phosphatase-like protein MK-STYX  Symbol and Name updated 1299863 APPROVED
2005-12-06 RGD1305845  similar to map kinase phosphatase-like protein MK-STYX  RGD1305845_predicted  similar to map kinase phosphatase-like protein MK-STYX (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1305845_predicted  similar to map kinase phosphatase-like protein MK-STYX (predicted)  LOC360792_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC360792_predicted  similar to map kinase phosphatase-like protein MK-STYX (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL