Mir702 (microRNA 702) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Mir702 (microRNA 702) Rattus norvegicus
Analyze
Symbol: Mir702
Name: microRNA 702
RGD ID: 4888576
Description: INTERACTS WITH 2,5-hexanedione; atrazine; bleomycin A2
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: rno-mir-702
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81225,318,495 - 25,318,601 (-)NCBIGRCr8
mRatBN7.21219,681,809 - 19,681,915 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1219,681,809 - 19,681,915 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1220,820,285 - 20,820,391 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01221,432,990 - 21,433,096 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01220,498,178 - 20,498,284 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01222,721,846 - 22,721,952 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1222,721,846 - 22,721,952 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01224,733,630 - 24,733,736 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1221,457,724 - 21,457,830 (-)NCBICelera
Cytogenetic Map12q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mir702Rat2,5-hexanedione increases expressionEXP 64804642,5-hexanedione results in increased expression of MIR702 mRNACTDPMID:31760062
Mir702Ratatrazine increases expressionEXP 6480464Atrazine results in increased expression of MIR702 mRNACTDPMID:36841081
Mir702Ratbleomycin A2 affects expressionEXP 6480464Bleomycin affects the expression of MIR702 mRNACTDPMID:25933445
Mir702Ratcisplatin increases expressionEXP 6480464Cisplatin results in increased expression of MIR702 mRNACTDPMID:27397436
Mir702Ratparacetamol decreases expressionEXP 6480464Acetaminophen results in decreased expression of MIR702 mRNACTDPMID:27397436
Mir702Ratsodium arsenite decreases expressionEXP 6480464sodium arsenite results in decreased expression of MIR702 mRNACTDPMID:25625412

PMID:16381832   PMID:20403161   PMID:34774740  



.

Predicted Targets
Summary Value
Count of predictions:17583
Count of gene targets:8869
Count of transcripts:9587
Interacting mature miRNAs:rno-miR-702-3p, rno-miR-702-5p
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 52 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)121914436246669029Rat
61443Btemp2Thermal response to stress QTL 23.30.000094body temperature trait (VT:0005535)core body temperature (CMO:0001036)121502518320794014Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)121961087046669029Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
737822Alc10Alcohol consumption QTL 102.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)121961087040218516Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)121587265332974238Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123297788Rat

1 to 10 of 52 rows



appendage
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
1 1 5 5 2 2 9 6 2 2 4 2


RefSeq Transcripts NR_037384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000054459
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1219,681,809 - 19,681,915 (-)Ensembl
Rnor_6.0 Ensembl1222,721,846 - 22,721,952 (-)Ensembl
RefSeq Acc Id: NR_037384
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81225,318,495 - 25,318,601 (-)NCBI
mRatBN7.21219,681,809 - 19,681,915 (-)NCBI
Rnor_6.01222,721,846 - 22,721,952 (-)NCBI
Rnor_5.01224,733,630 - 24,733,736 (-)NCBI
Celera1221,457,724 - 21,457,830 (-)NCBI
Sequence:

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 9 of 9 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-19671 BioCyc
Ensembl Genes ENSRNOG00000036338 Ensembl
miRBase MI0015464 ENTREZGENE
NCBI Gene 100526603 ENTREZGENE
PhenoGen Mir702 PhenoGen
RatGTEx ENSRNOG00000036338 RatGTEx
RNAcentral URS0000140555 RNACentral
  URS000075BA2D RNACentral
  URS000075EDF1 RNACentral
1 to 9 of 9 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-04-09 Mir702  microRNA 702  Mir702  microRNA mir-702  Name updated 61478 APPROVED
2010-11-23 Mir702  microRNA mir-702      Symbol and Name status set to provisional 70820 PROVISIONAL