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Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Rilpl1 | Rat | oculopharyngodistal myopathy 4 | | ISO | RILPL1 (Homo sapiens) | 7240710 | | OMIM | | |
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Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Rilpl1 | Rat | oculopharyngodistal myopathy 4 | | ISO | RILPL1 (Homo sapiens) | 7240710 | | OMIM | | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
3. | GOSPEL: a neuroprotective protein that binds to GAPDH upon S-nitrosylation. | Sen N, etal., Neuron. 2009 Jul 16;63(1):81-91. doi: 10.1016/j.neuron.2009.05.024. |
Rilpl1 (Rattus norvegicus - Norway rat) |
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RILPL1 (Homo sapiens - human) |
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Rilpl1 (Mus musculus - house mouse) |
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Rilpl1 (Chinchilla lanigera - long-tailed chinchilla) |
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RILPL1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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RILPL1 (Canis lupus familiaris - dog) |
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Rilpl1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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RILPL1 (Sus scrofa - pig) |
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RILPL1 (Chlorocebus sabaeus - green monkey) |
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Rilpl1 (Heterocephalus glaber - naked mole-rat) |
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Variants in Rilpl1
324 total Variants ![]() |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
D12Rat36 |
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BE108813 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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musculoskeletal system
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nervous system
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renal system
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reproductive system
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respiratory system
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sensory system
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visual system
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16 | 12 | 67 | 163 | 91 | 90 | 59 | 81 | 59 | 6 | 345 | 181 | 11 | 142 | 81 | 92 | 31 | 17 | 17 |
RefSeq Transcripts | NM_001191665 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006249294 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006249295 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006249296 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006249297 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039089435 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039089436 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039089437 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039089438 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039089439 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC127646 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
CH473973 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000012 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000001401 ⟹ ENSRNOP00000001401 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000090831 ⟹ ENSRNOP00000072380 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000098666 ⟹ ENSRNOP00000082089 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000099078 ⟹ ENSRNOP00000087559 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000115532 ⟹ ENSRNOP00000082699 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001191665 ⟹ NP_001178594 | ||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006249294 ⟹ XP_006249356 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006249295 ⟹ XP_006249357 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006249296 ⟹ XP_006249358 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039089435 ⟹ XP_038945363 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039089436 ⟹ XP_038945364 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039089437 ⟹ XP_038945365 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039089438 ⟹ XP_038945366 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039089439 ⟹ XP_038945367 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Protein RefSeqs | NP_001178594 | (Get FASTA) | NCBI Sequence Viewer |
XP_006249356 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006249357 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006249358 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038945363 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038945364 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038945365 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038945366 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038945367 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | D3ZUQ0 | (Get FASTA) | NCBI Sequence Viewer |
EDM13580 | (Get FASTA) | NCBI Sequence Viewer | |
EDM13581 | (Get FASTA) | NCBI Sequence Viewer | |
EDM13582 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000001401 | ||
ENSRNOP00000072380 | |||
ENSRNOP00000082699 | |||
ENSRNOP00000087559 |
RefSeq Acc Id: | NP_001178594 ⟸ NM_001191665 |
- UniProtKB: | D3ZUQ0 (UniProtKB/Swiss-Prot), A0A8L2PZW4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006249358 ⟸ XM_006249296 |
- Peptide Label: | isoform X5 |
- UniProtKB: | A0A8I5ZUH1 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006249356 ⟸ XM_006249294 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A6J0Z1 (UniProtKB/TrEMBL), A0A8L2PZW4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006249357 ⟸ XM_006249295 |
- Peptide Label: | isoform X4 |
- UniProtKB: | A0A8I5ZUH1 (UniProtKB/TrEMBL) |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000072380 ⟸ ENSRNOT00000090831 |
Ensembl Acc Id: | ENSRNOP00000001401 ⟸ ENSRNOT00000001401 |
RefSeq Acc Id: | XP_038945363 ⟸ XM_039089435 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8I5ZUH1 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038945364 ⟸ XM_039089436 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8I5ZUH1 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038945367 ⟸ XM_039089439 |
- Peptide Label: | isoform X8 |
- UniProtKB: | A0A8I5ZUH1 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038945365 ⟸ XM_039089437 |
- Peptide Label: | isoform X6 |
- UniProtKB: | A0A0G2K2U5 (UniProtKB/TrEMBL), A0A8I5ZUH1 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038945366 ⟸ XM_039089438 |
- Peptide Label: | isoform X7 |
- UniProtKB: | A0A8I5ZUH1 (UniProtKB/TrEMBL) |
Ensembl Acc Id: | ENSRNOP00000082699 ⟸ ENSRNOT00000115532 |
Ensembl Acc Id: | ENSRNOP00000082089 ⟸ ENSRNOT00000098666 |
Ensembl Acc Id: | ENSRNOP00000087559 ⟸ ENSRNOT00000099078 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-D3ZUQ0-F1-model_v2 | AlphaFold | D3ZUQ0 | 1-406 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13698613 | ||||||||
Promoter ID: | EPDNEW_R9135 | ||||||||
Type: | single initiation site | ||||||||
Name: | Rilpl1_1 | ||||||||
Description: | Rab interacting lysosomal protein-like 1 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1307973 | AgrOrtholog |
BioCyc Gene | G2FUF-19357 | BioCyc |
Ensembl Genes | ENSRNOG00000001055 | Ensembl, ENTREZGENE |
Ensembl Transcript | ENSRNOT00000001401 | ENTREZGENE |
ENSRNOT00000090831 | ENTREZGENE | |
ENSRNOT00000099078 | ENTREZGENE | |
ENSRNOT00000115532 | ENTREZGENE | |
Gene3D-CATH | 1.20.58.1770 | UniProtKB/Swiss-Prot |
6.10.230.10 | UniProtKB/Swiss-Prot | |
InterPro | DZIP_RILPL | UniProtKB/Swiss-Prot |
RH1 | UniProtKB/Swiss-Prot | |
RH2 | UniProtKB/Swiss-Prot | |
RILP_dimer | UniProtKB/Swiss-Prot | |
KEGG Report | rno:304469 | UniProtKB/Swiss-Prot |
NCBI Gene | 304469 | ENTREZGENE |
PANTHER | RILP-LIKE PROTEIN 1 | UniProtKB/Swiss-Prot |
ZINC FINGER PROTEIN DZIP1 | UniProtKB/Swiss-Prot | |
Pfam | Jnk-SapK_ap_N | UniProtKB/Swiss-Prot |
RILP | UniProtKB/Swiss-Prot | |
PhenoGen | Rilpl1 | PhenoGen |
PROSITE | RH1 | UniProtKB/Swiss-Prot |
RH2 | UniProtKB/Swiss-Prot | |
RatGTEx | ENSRNOG00000001055 | RatGTEx |
Superfamily-SCOP | RILP dimerisation region | UniProtKB/Swiss-Prot |
UniProt | A0A0G2K2U5 | ENTREZGENE, UniProtKB/TrEMBL |
A0A8I5ZUH1 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I5ZVF2_RAT | UniProtKB/TrEMBL | |
A0A8I6A875_RAT | UniProtKB/TrEMBL | |
A0A8L2PZW4 | ENTREZGENE, UniProtKB/TrEMBL | |
A6J0Z1 | ENTREZGENE, UniProtKB/TrEMBL | |
D3ZUQ0 | ENTREZGENE, UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2008-04-25 | Rilpl1 | Rab interacting lysosomal protein-like 1 | RGD1307973_predicted | similar to 2900002H16Rik protein (predicted) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2005-01-20 | RGD1307973_predicted | similar to 2900002H16Rik protein (predicted) | LOC304469_predicted | Symbol and Name status set to approved | 1331353 | APPROVED | |
2005-01-12 | LOC304469_predicted | similar to 2900002H16Rik protein (predicted) | Symbol and Name status set to provisional | 70820 | PROVISIONAL |