Gene: Trim50 (tripartite motif-containing 50) Rattus norvegicus
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Symbol: Trim50
Name: tripartite motif-containing 50
Description: ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of establishment of protein localization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); pleomorphic xanthoastrocytoma (ortholog); FOUND IN aggresome (ortholog); cytosol (ortholog); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; ammonium chloride
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase TRIM50; MGC93065; RING-type E3 ubiquitin transferase TRIM50; tripartite motif protein 50; tripartite motif-containing protein 50
Orthologs:
Homo sapiens (human) : TRIM50 (tripartite motif containing 50)  HGNC  Alliance
Mus musculus (house mouse) : Trim50 (tripartite motif-containing 50)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM50 (tripartite motif containing 50)
Canis lupus familiaris (dog) : TRIM50 (tripartite motif containing 50)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim50 (tripartite motif containing 50)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01224,348,426 - 24,365,467 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01226,345,729 - 26,362,703 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41222,455,550 - 22,470,523 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11222,446,133 - 22,461,108 (-)NCBI
Celera1223,063,653 - 23,078,622 (-)NCBICelera
Cytogenetic Map12q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trim50
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 631346
Created: 2003-08-13
Species: Rattus norvegicus
Last Modified: 2018-08-14
Status: ACTIVE