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Gene: Stx2 (syntaxin 2) Rattus norvegicus
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Symbol: Stx2
Name: syntaxin 2
Description: Exhibits SNARE binding activity. Involved in digestive tract morphogenesis; epithelial cell differentiation; and microvillus assembly. Localizes to the midbody; synapse; and transport vesicle. Orthologous to human STX2 (syntaxin 2); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; 2-ethoxyethanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Epim; epimorphin; syntaxin-2
Orthologs:
Homo sapiens (human) : STX2 (syntaxin 2)  HGNC  Alliance
Mus musculus (house mouse) : Stx2 (syntaxin 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Stx2 (syntaxin 2)
Pan paniscus (bonobo/pygmy chimpanzee) : STX2 (syntaxin 2)
Canis lupus familiaris (dog) : STX2 (syntaxin 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Stx2 (syntaxin 2)
Sus scrofa (pig) : STX2 (syntaxin 2)
more info ...
Allele / Splice: Stx2_v1   Stx2_v4   Stx2_v3   Stx2_v2  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01231,324,203 - 31,360,249 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01233,250,624 - 33,286,683 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41228,751,591 - 28,773,351 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11228,614,978 - 28,636,739 (+)NCBI
Celera1229,385,007 - 29,406,766 (+)NCBICelera
Cytogenetic Map12q13NCBI
RH 3.4 Map12461.4RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Stx2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2558
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.