Gene: Cldn15 (claudin 15) Rattus norvegicus
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Symbol: Cldn15
Name: claudin 15
Description: ENCODES a protein that exhibits structural molecule activity (inferred); INVOLVED IN ion transport (inferred); PARTICIPATES IN hepatitis C pathway; ASSOCIATED WITH pleomorphic xanthoastrocytoma (ortholog); FOUND IN lateral plasma membrane (ortholog); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A
AGR Description: Predicted to have structural molecule activity; predicted to be involved in ion transport; predicted to localize to the lateral plasma membrane; orthologous to human CLDN15 (claudin 15).
Merged Description: Predicted to have structural molecule activity; predicted to be involved in ion transport; predicted to localize to the lateral plasma membrane; orthologous to human CLDN15 (claudin 15); PARTICIPATES IN hepatitis C pathway; INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: claudin-15; LOC304388
Orthologs:
Homo sapiens (human) : CLDN15 (claudin 15)  HGNC  Alliance
Mus musculus (house mouse) : Cldn15 (claudin 15)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cldn15 (claudin 15)
Pan paniscus (bonobo/pygmy chimpanzee) : CLDN15 (claudin 15)
Canis lupus familiaris (dog) : CLDN15 (claudin 15)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cldn15 (claudin 15)
Sus scrofa (pig) : CLDN15 (claudin 15)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01222,738,198 - 22,750,392 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01224,749,982 - 24,759,973 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41220,823,334 - 20,845,306 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11220,813,183 - 20,833,795 (+)NCBI
Celera1221,475,263 - 21,482,160 (-)NCBICelera
Cytogenetic Map12q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cldn15
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310678
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.