Kidm41 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Kidm41 (Kidney mass QTL 41) Rattus norvegicus

Symbol: Kidm41
Name: Kidney mass QTL 41
RGD ID: 2312418
Previously known as: anti-GBM antibody-induced glomerulonephritis 2; Again2
Trait: kidney mass   (VT:0002707)    
Measurement Type: single kidney wet weight to body weight ratio   (CMO:0000622)    
LOD Score: 3.7
P Value: 1.0E-4
Variance: Not Available
Inheritance Type: recessive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8125,921,918 - 25,247,790RGD_MAPPER_PIPELINE
mRatBN7.2121 - 19,611,090RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0121 - 22,650,917RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0124,344,844 - 24,663,198RGDRnor5.0
RGSC_v3.412665,384 - 20,932,760RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: DA/Slc WKY/NCrl 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait
kidney mass  (IDA)

Rat Strain
DA/Slc  (IEA)
WKY/NCrl  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic mapping found major QTLs for antibody-induced glomerulonephritis in WKY rats. Kose H, etal., Exp Anim. 2009 Apr;58(2):193-8.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1591034Zar1lzygote arrest 1-like124653456434Rat
2219Brca2BRCA2, DNA repair associated1259492103789Rat
41278455LOC120096086U4 spliceosomal RNA127969379833Rat
1595713N4bp2l1NEDD4 binding protein 2-like 112102572128352Rat
1359603N4bp2l2NEDD4 binding protein 2-like 212137342200292Rat
1310838Pds5bPDS5 cohesin associated factor B12202481345596Rat
40996321LOC120096101U6 spliceosomal RNA12242483242588Rat
41260407LOC120096119small nucleolar RNA SNORA1712244785244876Rat
41300882LOC120095865uncharacterized LOC12009586512358049370593Rat
7689250LOC102548900uncharacterized LOC10254890012397693419407Rat
620396KlKlotho12490402531417Rat
7752935LOC102548964uncharacterized LOC10254896412536196556469Rat
1564816Stard13StAR-related lipid transfer domain containing 1312566282959372Rat
41260173Trnap-agg21transfer RNA proline (anticodon AGG) 2112640392640473Rat
7733180LOC102549089uncharacterized LOC10254908912874530895451Rat
1306832Rfc3replication factor C subunit 31210009871011778Rat
1626010Vom2r-ps97vomeronasal 2 receptor, pseudogene 971210194521019856Rat
7657613LOC102554571uncharacterized LOC1025545711210274001034088Rat
41130581LOC1200960765S ribosomal RNA1210444051044522Rat
41104179LOC1200960255S ribosomal RNA1210467881046905Rat
41346935LOC1200960445S ribosomal RNA1210491651049282Rat
41176726LOC1200960245S ribosomal RNA1210515581051675Rat
41356693LOC1200960265S ribosomal RNA1210539471054064Rat
41212099LOC1200960575S ribosomal RNA1210564701056587Rat
41357490LOC1200960685S ribosomal RNA1210589721059089Rat
41403812LOC1200960795S ribosomal RNA1210614201061537Rat
41069558LOC1200960455S ribosomal RNA1210638881064005Rat
41006314LOC1200960875S ribosomal RNA1210663381066455Rat
41131872LOC1200960985S ribosomal RNA1210687811068898Rat
41374131LOC1200961095S ribosomal RNA1210712191071336Rat
41302635LOC1200960475S ribosomal RNA1210736891073806Rat
40985259LOC1200961205S ribosomal RNA1210772421077359Rat
41138966LOC1200961285S ribosomal RNA1210796731079790Rat
41027400LOC1200960355S ribosomal RNA1210820841082201Rat
41373317LOC1200960465S ribosomal RNA1210845401084657Rat
41372926LOC1200960425S ribosomal RNA1210871331087250Rat
40946566LOC1200960435S ribosomal RNA1210925261092643Rat
41397614LOC1200960525S ribosomal RNA1211567021156819Rat
3581Rn5s5S RNA1211591401159259Rat
41320765LOC1200960535S ribosomal RNA1211616651161782Rat
41261663LOC1200960545S ribosomal RNA1211640891164206Rat
41008532LOC1200960555S ribosomal RNA1211665541166671Rat
41070426LOC1200960725S ribosomal RNA1211689951169112Rat
41141455LOC1200960565S ribosomal RNA1211714301171547Rat
41267528LOC1200960735S ribosomal RNA1211738511173968Rat
41063253LOC1200960585S ribosomal RNA1211762821176399Rat
41251274LOC1200960345S ribosomal RNA1211787361178853Rat
41149510LOC1200961265S ribosomal RNA1211811411181258Rat
2917Insrinsulin receptor1211931931330976Rat
1311448Arhgef18Rho/Rac guanine nucleotide exchange factor 181213950351503082Rat
41251662LOC120095867uncharacterized LOC1200958671214728701474543Rat
1307070Pex11gperoxisomal biogenesis factor 11 gamma1215026061532347Rat
1563425Saxo5stabilizer of axonemal microtubules 51215209831538127Rat
1310416Zfp358zinc finger protein 3581215523671556460Rat
1308953Mcoln1mucolipin TRP cation channel 11215603411574252Rat
41326642LOC120095868uncharacterized LOC1200958681215723811575749Rat
1564611Pnpla6patatin-like phospholipase domain containing 61215743871603735Rat
1597412Camsap3calmodulin regulated spectrin-associated protein family, member 31216430621666685Rat
621217Xab2XPA binding protein 21216676721679702Rat
1585222Pet100PET100 cytochrome c oxidase chaperone1216798051682540Rat
1306217Pcp2Purkinje cell protein 21216816591683899Rat
9327255LOC103690858uncharacterized LOC1036908581216858931689330Rat
619967Stxbp2syntaxin binding protein 21216893641701145Rat
628781Retnresistin1217108811712621Rat
1565374Mcemp1mast cell-expressed membrane protein 11217217811727350Rat
1563971Trappc5trafficking protein particle complex subunit 51217376661741312Rat
619997Fcer2Fc epsilon receptor II1217428091754476Rat
1597482Clec4gC-type lectin domain family 4, member G1217803701785027Rat
1308239Cd209aCD209a molecule1218226631828246Rat
1563333Cd209eCD209e molecule1218621041868735Rat
1561104Cd209dCD209d molecule1218911091897559Rat
1561466Clec4mC-type lectin domain family 4 member M1219159021924529Rat
1582956Cd209cCD209c molecule1219362331943841Rat
2322042Cd209al1CD209a molecule like 11220045272011820Rat
1595714Ranbp1-ps2RAN binding protein 1, pseudogene 21220695242070189Rat
9362833Cd209al2CD209a molecule like 21221002032111338Rat
1584108Cd209al3CD209a molecule like 31221898742197257Rat
1559710Cd209cl2CD209c molecule like 21222228452236656Rat
41255484Cd209cl1CD209c molecule like 11222766112281179Rat
7566104Cd209el1CD209e molecule like 11223125952319488Rat
1584154Uba3-ps2ubiquitin-like modifier activating enzyme 3, pseudogene 21223333192334709Rat
1564571Cd209l1CD209 molecule like 11223589412366451Rat
1585219C12h12orf43-ps1similar to human chromosome 12 open reading frame 43, pseudogene 11223982082399111Rat
2324825Cd209fl1CD209f molecule like 11224261482429043Rat
1585245Nkiras2-ps1NFKB inhibitor interacting Ras-like 2, pseudogene 11224679142472875Rat
1585258Cd209fCD209f molecule1224844322487493Rat
9311972LOC103690865uncharacterized LOC1036908651224907522518506Rat
1561962Evi5lecotropic viral integration site 5-like1225196482558766Rat
1566084Prr36proline rich 361225605332567766Rat
1311979Lrrc8eleucine rich repeat containing 8 VRAC subunit E1225782402589407Rat
1560043Map2k7mitogen activated protein kinase kinase 71225913122600534Rat
1586419Tgfbr3ltransforming growth factor beta receptor 3 like1226008742604211Rat
41161201LOC120095870uncharacterized LOC1200958701226056112607753Rat
1304589Snapc2small nuclear RNA activating complex, polypeptide 21226057942608997Rat
2449Ctxn1cortexin 11226104652612076Rat
3864Timm44translocase of inner mitochondrial membrane 441226125812629374Rat
1308649Elavl1ELAV like RNA binding protein 11226409362684787Rat
7721017LOC102552452uncharacterized LOC1025524521226880052694910Rat
1305530Ccl25C-C motif chemokine ligand 251227073982716571Rat
1586494Higd2al1HIG1 hypoxia inducible domain family, member 2A-like 11227770942777581Rat
1307656Dppa1-ps1developmental pluripotency associated 1, pseudogene 11228085692809099Rat
1309303Cers4ceramide synthase 41228517842890244Rat
1560561Vom2r60vomeronasal 2 receptor, 601228902262996619Rat
1566381Vom2r59vomeronasal 2 receptor, 591230139423077289Rat
1587650Vom2r-ps96vomeronasal 2 receptor, pseudogene 961230813013082269Rat
1587657Vom2r-ps95vomeronasal 2 receptor, pseudogene 951231151823115828Rat
1562451Pabpc4-ps1poly(A) binding protein, cytoplasmic 4, pseudogene 11231161363119449Rat
1626011Vom2r-ps94vomeronasal 2 receptor, pseudogene 941231194963119716Rat
41008076Vmn2r116l-ps9vomeronasal 2, receptor 116 like, pseudogene 91231634203198108Rat
1586802Vmn2r116l-ps33vomeronasal 2, receptor 116 like, pseudogene 331232083143310274Rat
1588806Vom2r-ps91vomeronasal 2 receptor, pseudogene 911233202573392653Rat
1583708Vom2r58vomeronasal 2 receptor, 581233964303503345Rat
1626034Vom2r-ps90vomeronasal 2 receptor, pseudogene 901235621513562807Rat
41299569LOC120093129vomeronasal type-2 receptor 116-like1235691283668835Rat
1588856Psma6-ps4proteasome 20S subunit alpha 6, pseudogene 41237700673771038Rat
41347965LOC120095871zinc finger protein 431-like1238531703876224Rat
41256273LOC120095873uncharacterized LOC1200958731238908813897577Rat
9377552LOC103690884uncharacterized LOC1036908841239205313925662Rat
41226170Rps29-ps5ribosomal protein S29, pseudogene 51239465963946774Rat
2311392Zfp958zinc finger protein 9581239534423975328Rat
41046868LOC1200960675S ribosomal RNA1240071764007293Rat
41387537LOC1200960665S ribosomal RNA1240095514009668Rat
40991196LOC1200960745S ribosomal RNA1240119084012025Rat
41189384LOC1200960615S ribosomal RNA1240142774014394Rat
41285596LOC1200960705S ribosomal RNA1240166194016736Rat
41306760LOC1200960655S ribosomal RNA1240189864019103Rat
41185968LOC1200960515S ribosomal RNA1240213534021470Rat
41067246LOC1200961455S ribosomal RNA1240239384024055Rat
41368807LOC1200960365S ribosomal RNA1240264994026616Rat
41034193LOC1200960635S ribosomal RNA1240291004029217Rat
40955274LOC1200960755S ribosomal RNA1240314514031568Rat
41382435LOC1200960715S ribosomal RNA1240809734081089Rat
41124546LOC1200961495S ribosomal RNA1240834444083561Rat
40943309LOC1200960485S ribosomal RNA1240867184086835Rat
41391876LOC1200960595S ribosomal RNA1240894274089544Rat
40972850LOC1200960495S ribosomal RNA1240919074092024Rat
41130517LOC1200960315S ribosomal RNA1240945064094623Rat
41232418LOC1200960505S ribosomal RNA1240969944097111Rat
41346439LOC1200960605S ribosomal RNA1240995614099678Rat
41366972LOC1200961615S ribosomal RNA1241019594102076Rat
41350955LOC1200961625S ribosomal RNA1241058964106013Rat
41339942LOC1200961635S ribosomal RNA1241083464108463Rat
41117008LOC1200961645S ribosomal RNA1241108124110929Rat
40961569LOC1200960415S ribosomal RNA1241132844113401Rat
41283255LOC1200961655S ribosomal RNA1241157284115845Rat
41118806LOC1200960205S ribosomal RNA1241181924118309Rat
40974699LOC1200960215S ribosomal RNA1241228624122979Rat
41375950LOC1200960235S ribosomal RNA1241267604126877Rat
41314973LOC1200960625S ribosomal RNA1241305744130691Rat
40969596LOC1200961605S ribosomal RNA1241330324133149Rat
41233053LOC1200960225S ribosomal RNA1241369354137052Rat
41335413LOC1200960285S ribosomal RNA1241394184139535Rat
40975160LOC1200960645S ribosomal RNA1241497994149916Rat
41341942LOC120095875uncharacterized LOC1200958751241560184162757Rat
1565198Ralbp1l1ralA binding protein 1 like 11242013574246044Rat
1589449Tgap1-ps1GTPase activating protein testicular GAP1, pseudogene 11243149344349420Rat
2318961Txnl4a-ps1thioredoxin-like 4A, pseudogene 11243494804349671Rat
1588474Naa11-ps1N(alpha)-acetyltransferase 11, NatA catalytic subunit, pseudogene 11243495824350635Rat
7541342Zfp958l1zinc finger protein 958 like 11244134724438668Rat
40995874Rps29-ps3ribosomal protein S29, pseudogene 31244455254445703Rat
1307034FryFRY microtubule binding protein1244938904887118Rat
7623530LOC102546827uncharacterized LOC1025468271247366364777460Rat
9685083Lnc001long non-coding RNA 0011248824264891557Rat
2320669Mrpl17-ps1mitochondrial ribosomal protein L17, pseudogene 11249002934900803Rat
40971691LOC120095826uncharacterized LOC1200958261249034044909107Rat
41340188LOC120095827uncharacterized LOC1200958271249100434920193Rat
1309449Rxfp2relaxin family peptide receptor 21249247474986672Rat
7673129LOC102549667uncharacterized LOC1025496671249292974931077Rat
7508871LOC102549494uncharacterized LOC1025494941249824375005223Rat
11366562LOC108352409uncharacterized LOC1083524091250632515100059Rat
41057449LOC120095829uncharacterized LOC1200958291251474445159515Rat
41169568LOC120095828uncharacterized LOC1200958281251597175161108Rat
7745634LOC102549959uncharacterized LOC1025499591251763315187300Rat
41195301LOC120095830uncharacterized LOC1200958301252403125254011Rat
1588723B3glctbeta 3-glucosyltransferase1252555215346807Rat
9364248Hnrnpml1heterogeneous nuclear ribonucleoprotein M like 11252862115286732Rat
40969776LOC120096107small nucleolar RNA SNORA671253434635343605Rat
11470768LOC108352411uncharacterized LOC1083524111253844735390758Rat
1311609Hsph1heat shock protein family H (Hsp110) member 11253909165410224Rat
1561029Wdr95WD40 repeat domain 951254158155466253Rat
41072978LOC120095877uncharacterized LOC1200958771254675095482055Rat
7652109LOC102551137uncharacterized LOC1025511371255139145517597Rat
41023871Wdr95lWD40 repeat domain 95 like1255197525557168Rat
1560846Tex26testis expressed 261255736915605209Rat
1307396Medagmesenteric estrogen-dependent adipogenesis1256131915634583Rat
41238510Rpl28-ps11ribosomal protein L28, pseudogene 111256501915651868Rat
7626408LOC102551556uncharacterized LOC1025515561256529055656673Rat
41269287LOC120096091U4 spliceosomal RNA1257218415721973Rat
2097Alox5aparachidonate 5-lipoxygenase activating protein1257489415772986Rat
7570662LOC102551736uncharacterized LOC1025517361257955875800442Rat
41282038LOC120095879uncharacterized LOC1200958791257994835804796Rat
9177507Rps19l6ribosomal protein S19 like 61258076915808050Rat
11366571Trnan-guu11transfer RNA asparagine (anticodon GUU) 111258151765815249Rat
1310835Uspl1ubiquitin specific peptidase like 11258234605850470Rat
11363195LOC108352413uncharacterized LOC1083524131258720435884746Rat
41369369LOC120096113small nucleolar RNA SNORA381259231965923336Rat
2802Hmgb1high mobility group box 11259729505979658Rat
41351322Rpl18-ps15ribosomal protein L18, pseudogene 151260048556020163Rat
7721386LOC102554603uncharacterized LOC1025546031260368536072289Rat
9247033Rpl35a-ps8ribosomal protein L35A, pseudogene 81260722796072780Rat
7724641LOC102554734uncharacterized LOC1025547341260790146081600Rat
1359252Katnal1katanin catalytic subunit A1 like 11260946636156114Rat
7625496LOC102553253uncharacterized LOC1025532531261583856168368Rat
11390141LOC108352416uncharacterized LOC1083524161262337616266127Rat
11375417LOC108352417uncharacterized LOC1083524171263796526406988Rat
41029597LOC120095882uncharacterized LOC1200958821264091246412537Rat
1305431Ubl3ubiquitin-like 31264736846518331Rat
6497599Ppia-ps3peptidylprolyl isomerase A, pseudogene 31265655536570171Rat
3716Slc7a1solute carrier family 7 member 11266282886703849Rat
1562533Mtus2microtubule associated scaffold protein 21267065317078331Rat
7711997LOC102547400uncharacterized LOC1025474001267617456766523Rat
41261087LOC120096082U2 spliceosomal RNA1269766606976752Rat
1307594Slc46a3solute carrier family 46, member 31271406107157093Rat
1305831Pompproteasome maturation protein1271620987174737Rat
2621Flt1Fms related receptor tyrosine kinase 11272968997468626Rat
7630468LOC102547586uncharacterized LOC1025475861273648167366809Rat
41146634LOC120095883uncharacterized LOC1200958831273750657392844Rat
1590880Pan3poly(A) specific ribonuclease subunit PAN31274767077595384Rat
1584949Rpl18a-ps2ribosomal protein L18A, pseudogene 21276150657616561Rat
61308Flt3Fms related receptor tyrosine kinase 31276239307699474Rat
1595191Uradureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase1277092787718925Rat
621234Cdx2caudal type homeo box 21277267987733142Rat
62387Pdx1pancreatic and duodenal homeobox 11277578657763064Rat
41344340LOC120096117small nucleolar RNA SNORA171278726267872754Rat
1310020Gsx1GS homeobox 11278806637882947Rat
41319381LOC120095852uncharacterized LOC1200958521278837557884688Rat
1564358Polr1dRNA polymerase I and III subunit D1279705928004157Rat
1308222Lnx2ligand of numb-protein X 21280052028070494Rat
40941861LOC120095885uncharacterized LOC1200958851281099548112013Rat
41360313LOC120095884uncharacterized LOC1200958841281100828112776Rat
1592673Mtif3mitochondrial translational initiation factor 31281261938140706Rat
619746Gtf3ageneral transcription factor III A1281367468144690Rat
11371602LOC108352419uncharacterized LOC1083524191282166898229202Rat
1303231Rasl11aRAS-like family 11 member A1282581488260909Rat
68390Rpl21ribosomal protein L211282686418272278Rat
40978574Snora27small nucleolar RNA, H/ACA box 271282699058270033Rat
41011142Snord102small nucleolar RNA, C/D box 1021282702758270345Rat
41141036Lmbr1l-ps1limb development membrane protein 1-like, pseudogene 11283054028306445Rat
1308045Usp12ubiquitin specific peptidase 121283098458363686Rat
41208279LOC120095887uncharacterized LOC1200958871284381968439433Rat
68333Gpr12G protein-coupled receptor 121285227098525875Rat
41279517LOC120095888uncharacterized LOC1200958881285436408546160Rat
41348606LOC120095929uncharacterized LOC1200959291285469118553407Rat
1592807Wasf3WASP family member 31285638058660799Rat
41169375LOC12009588960S ribosomal protein L29-like1286316048632206Rat
1590340Hint1l2histidine triad nucleotide binding protein 1 like 21286684388668940Rat
41384695LOC120095890uncharacterized LOC1200958901286852558704812Rat
1560888Cdk8cyclin-dependent kinase 81287371988805026Rat
1306092Rnf6ring finger protein 61288167978826870Rat
41153330LOC120095930uncharacterized LOC1200959301288433128846055Rat
628709Cyp3a18cytochrome P450, family 3, subfamily a, polypeptide 181288805098930382Rat
1595705Cyp3a73cytochrome P450, family 3, subfamily a, polypeptide 731289555938995061Rat
1583820Hsp90aa1-ps8heat shock protein 90 alpha family class A member 1, pseudogene 81289949248997727Rat
9074083Cyp3a2l1cytochrome P450, family 3, subfamily a, polypeptide 2 like 11290152209042818Rat
1597309Cyp3a71-pscytochrome P450, family 3, subfamily a, polypeptide 71, pseudogene1291363189151198Rat
708379Cyp3a2cytochrome P450, family 3, subfamily a, polypeptide 21292079789230064Rat
628626Cyp3a23-3a1cytochrome P450, family 3, subfamily a, polypeptide 23-polypeptide 11292561599285020Rat
11430784LOC10835242160S ribosomal protein L29 pseudogene1292775009278307Rat
1596095Dppa4l1developmental pluripotency associated 4 like 11292861419287341Rat
1308619Zscan25zinc finger and SCAN domain containing 251293273479338206Rat
1309158Zfp655zinc finger protein 6551293499859375449Rat
1311175Zkscan5zinc finger with KRAB and SCAN domains 51293845619405763Rat
628654Zfp394zinc finger protein 3941294090479417228Rat
1596067Atp5mfATP synthase membrane subunit f1294216659428236Rat
620440Cpsf4cleavage and polyadenylation specific factor 41294297659445586Rat
1311473Ptcd1pentatricopeptide repeat domain 11294456569463434Rat
621103Bud31BUD31 homolog1294628389470387Rat
620442Pdap1PDGFA associated protein 11294706529480880Rat
2155Arpc1bactin related protein 2/3 complex, subunit 1B1294821769495772Rat
620834Arpc1aactin related protein 2/3 complex, subunit 1A1295024969525304Rat
41250024Trnap-agg80transfer RNA proline (anticodon AGG) 801295309469531026Rat
1596017Rps15al1ribosomal protein S15A-like 11295334659533899Rat
11440668LOC108352477U1 small nuclear ribonucleoprotein C pseudogene1295701889570666Rat
1594749Kpna7karyopherin subunit alpha 71295763789635247Rat
1594738Smurf1SMAD specific E3 ubiquitin protein ligase 11296350099726520Rat
1305446Trraptransformation/transcription domain-associated protein1297380069827708Rat
40977332LOC120096103small nucleolar RNA SNORA701298221599822288Rat
1563248Tmem130transmembrane protein 1301298370559862843Rat
41248887Trnas-aga12transfer RNA serine (anticodon AGA) 121299859469986026Rat
1309447Nptx2neuronal pentraxin 2121003743510048345Rat
9241109LOC103693619uncharacterized LOC103693619121015764810158685Rat
2322550Cpsf4l2cleavage and polyadenylation specific factor 4 like 2121021174410213512Rat
1565131Rpl15l1ribosomal protein L15 like 1121022718110227989Rat
40932154LOC120096089U4 spliceosomal RNA121023732610237440Rat
1308452Baiap2l1BAR/IMD domain containing adaptor protein 2 like 1121025043410339937Rat
9081796Ube2n-ps5ubiquitin-conjugating enzyme E2N, pseudogene 5121030909510314132Rat
1309187Bri3brain protein I3121034100710364655Rat
7638517LOC102554669uncharacterized LOC102554669121034904510359627Rat
1306873Tecpr1tectonin beta-propeller repeat containing 1121039158710420462Rat
3091Bhlha15basic helix-loop-helix family, member a15121042046510424641Rat
1598332Lmtk2lemur tyrosine kinase 2121042677210508750Rat
3222Ocmoncomodulin121053561910596705Rat
1306410Ccz1CCZ1 homolog, vacuolar protein trafficking and biogenesis associated121060106610624608Rat
1311893Rsph10bradial spoke head 10 homolog B121062743410675227Rat
1305483Pms2PMS1 homolog 2, mismatch repair system component121067681810701161Rat
40982078LOC120096114small nucleolar RNA SNORA51121068966410689796Rat
1560787Aimp2aminoacyl tRNA synthetase complex-interacting multifunctional protein 2121070119410710772Rat
70883Eif2ak1eukaryotic translation initiation factor 2 alpha kinase 1121071077110744597Rat
1586393Ankrd61ankyrin repeat domain 61121071890810723267Rat
1585013Aldoa-ps3aldolase, fructose-bisphosphate A, pseudogene 3121077795210779290Rat
1305231Usp42ubiquitin specific peptidase 42121080086410840785Rat
41127121LOC120095931collagen alpha-1(I) chain-like121080481010821511Rat
620399Cyth3cytohesin 3121084013710933792Rat
1561923Fam220afamily with sequence similarity 220, member A121099796911013962Rat
619755Rac1Rac family small GTPase 1121103702811057251Rat
1310193Daglbdiacylglycerol lipase, beta121105973211102170Rat
1304618Kdelr2KDEL endoplasmic reticulum protein retention receptor 2121113882011157117Rat
1310492Grid2ipGrid2 interacting protein121116656711203765Rat
1308389Zdhhc4zinc finger DHHC-type palmitoyltransferase 4121123086411244898Rat
1584479Ints15integrator complex subunit 15121124504511260170Rat
11371857LOC108352423uncharacterized LOC108352423121125474711258556Rat
1563095Zfp853zinc finger protein 853121126612411276492Rat
1311647Zfp316zinc finger protein 316121129444511313841Rat
1564396Zfp12zinc finger protein 12121131697111330498Rat
1561076Spdye4speedy/RINGO cell cycle regulator family member E4121133726211344753Rat
7634033Spdye4-ps1speedy/RINGO cell cycle regulator family member E4, pseudogene 1121135951011373943Rat
1562875RbakRB-associated KRAB zinc finger121137531411388937Rat
7637009LOC102555525uncharacterized LOC102555525121139674711397774Rat
2322117Rpl36l5ribosomal protein L36 like 5121140837911408767Rat
1565135Rnf216ring finger protein 216121145475211576305Rat
41204650LOC120095834uncharacterized LOC120095834121150554911508629Rat
1583309Fscn1fascin actin-bundling protein 1121159704211610183Rat
41297723LOC120095835uncharacterized LOC120095835121160012611602621Rat
41050335LOC120095836uncharacterized LOC120095836121163259611640692Rat
628837Actbactin, beta121166311211666697Rat
1596958Fbxl18F-box and leucine-rich repeat protein 18121167453811701317Rat
11503703LOC108352424uncharacterized LOC108352424121174731011755112Rat
1307540Tnrc18trinucleotide repeat containing 18121175539411851717Rat
41235499LOC120095837uncharacterized LOC120095837121179749311801221Rat
1310545Slc29a4solute carrier family 29 member 4121185354011884660Rat
1359154Wipi2WD repeat domain, phosphoinositide interacting 2121191136911939799Rat
1306506Mmd2monocyte to macrophage differentiation-associated 2121196273312009776Rat
1306155RadilRap associating with DIL domain121202439512088540Rat
1310946Papolbpoly(A) polymerase beta121204427512046621Rat
1593125Ap5z1adaptor related protein complex 5 subunit zeta 1121209383412109043Rat
1309643Foxk1forkhead box K1121211011912175089Rat
41253801LOC120095892uncharacterized LOC120095892121219044212208375Rat
1560686Sdk1sidekick cell adhesion molecule 1121237807413363934Rat
1564193Ube2c-ps2ubiquitin-conjugating enzyme E2C, pseudogene 2121266888412669423Rat
41240022LOC120096102U6 spliceosomal RNA121303886713038969Rat
1584808Nip7-ps9nucleolar pre-rRNA processing protein NIP7, pseudogene 9121342089613421417Rat
41079527LOC120095893uncharacterized LOC120095893121343303013460245Rat
7598302LOC102547234uncharacterized LOC102547234121354778913607490Rat
2323211Card11caspase recruitment domain family, member 11121362114013758115Rat
71018Gna12G protein subunit alpha 12121380558013886255Rat
1311314Amz1archaelysin family metallopeptidase 1121388651813924275Rat
1565146Brat1BRCA1-associated ATM activator 1121392888913951760Rat
1311349IqceIQ motif containing E121394329013982708Rat
1309549Ttyh3tweety family member 3121399683114025457Rat
620587LfngLFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase121403055114038996Rat
71055Grifingalectin-related inter-fiber protein121408017014082892Rat
1308214Chst12carbohydrate sulfotransferase 12121411063114129099Rat
1598146Kif19bkinesin family member 19B121414416314196259Rat
41188349LOC120095895uncharacterized LOC120095895121414908814152690Rat
41182922LOC120096093U6 spliceosomal RNA121416998914170094Rat
1309018Eif3beukaryotic translation initiation factor 3, subunit B121419640314220865Rat
11502171LOC108352425uncharacterized LOC108352425121422308014265458Rat
1305791Snx8sorting nexin 8121425182914300435Rat
621080Nudt1nudix hydrolase 1121430251414309559Rat
1305944Mrm2mitochondrial rRNA methyltransferase 2121430955614314759Rat
1596881Mad1l1mitotic arrest deficient 1 like 1121432089214630750Rat
1308787Elfn1extracellular leucine-rich repeat and fibronectin type III domain containing 1121466004914725709Rat
2319950Psmg3proteasome assembly chaperone 3121480944014812357Rat
1306702Tmem184atransmembrane protein 184A121481750814833109Rat
628633MafkMAF bZIP transcription factor K121483462814856414Rat
7519900LOC102546414uncharacterized LOC102546414121484552214848118Rat
1308908Ints1integrator complex subunit 1121486131214886048Rat
1307875Micall2MICAL-like 2121489918814927949Rat
69361UncxUNC homeobox121509277915097300Rat
11414185Npm1-ps12nucleophosmin 1, pseudogene 12121513561915136849Rat
1310991Zfand2azinc finger AN1-type containing 2A121516160115172679Rat
1566418Chlsncholesin121518572815289042Rat
619845Gper1G protein-coupled estrogen receptor 1121521721715222679Rat
7673409C130050O18RiklRIKEN cDNA C130050O18 gene like121522974315241457Rat
1560731Gpr146G protein-coupled receptor 146121525193615267217Rat
2325466Mir339microRNA 339121527754615277641Rat
1305193Cyp2w1cytochrome P450, family 2, subfamily w, polypeptide 1121529155215296421Rat
1305631Cox19cytochrome c oxidase assembly factor COX19121530353515313014Rat
621418Adap1ArfGAP with dual PH domains 1121532391315376110Rat
1311660Get4guided entry of tail-anchored proteins factor 4121537700915394238Rat
1359142Sun1Sad1 and UNC84 domain containing 1121539637815441277Rat
7682710LOC102547493uncharacterized LOC102547493121543065715453779Rat
1566028Dnaaf5dynein, axonemal, assembly factor 5121545363615492722Rat
3392Prkar1bprotein kinase cAMP-dependent type I regulatory subunit beta121549223315624942Rat
9133748LOC103691050uncharacterized LOC103691050121563246015636507Rat
3282Pdgfaplatelet derived growth factor subunit A121564554915667056Rat
7536442LOC10254879440S ribosomal protein S27-like121577683915778793Rat
1594158Foxl3forkhead box L3121581217715814534Rat
1311980Fam20cFAM20C, golgi associated secretory pathway kinase121582686415885423Rat
41016460Ppp1r14b-ps2protein phosphatase 1, regulatory (inhibitor) subunit 14B, pseudogene121589313815975566Rat
1566386Znf846zinc finger protein 846121597931216012933Rat
1310463Zfp68zinc finger protein 68121602605816040995Rat
1562569Rps8-ps9ribosomal protein S8, pseudogene 9121604777616048497Rat
1625997Vom2r-ps98vomeronasal 2 receptor, pseudogene 98121606460616066575Rat
6499499Spn-ps1sialophorin, pseudogene 1121610035416101498Rat
1598204Spn-ps7sialophorin, pseudogene 7121610570516106765Rat
6499303Spn-ps2sialophorin, pseudogene 2121611083816112028Rat
2319349Spn-ps6sialophorin, pseudogene 6121611083816117345Rat
1559964Spnl2sialophorin like 2121612615016131108Rat
1598202Spn-ps8sialophorin, pseudogene 8121613127516133558Rat
1359506Spnl1sialophorin like 1121613658316147719Rat
41150475Spn-ps5sialophorin, pseudogene 5121614788516150072Rat
6497070Spn-ps3sialophorin, pseudogene 3121615474016156686Rat
1359435Zfp157zinc finger protein 157121624823016279459Rat
1332710Or7a43-ps1olfactory receptor family 7 subfamily A member 43, pseudogene 1121628844616289236Rat
1305017Dhrsxdehydrogenase/reductase X-linked121629976816304553Rat
708472Asmtacetylserotonin O-methyltransferase121630471916309568Rat
1564640Akap17aA-kinase anchoring protein 17A121631042716315166Rat
1306877Asmtlacetylserotonin O-methyltransferase-like121631533516318083Rat
628728Il3rainterleukin 3 receptor subunit alpha121631808116323781Rat
1560288Pum3-ps3pumilio RNA-binding family member 3, pseudogene 3121635713116359221Rat
1595919Cyp3a62cytochrome P450, family 3, subfamily a, polypeptide 62121639799816433833Rat
41378758Fus-ps5FUS RNA binding protein, pseudogene 5121657167116577185Rat
1593752Tubb4b-ps2tubulin, beta 4B class IVb, pseudogene 2121661134416612890Rat
1562172Spry3sprouty RTK signaling antagonist 3121666318816673124Rat
621558Vamp7vesicle-associated membrane protein 7121672848616764261Rat
708392Cyp3a9cytochrome P450, family 3, subfamily a, polypeptide 9121680622216846428Rat
1595709LOC498158hypothetical LOC498158121686689516867939Rat
2319106Rpl31l15ribosomal protein L31 like 15121689311116893551Rat
727930Gjc3gap junction protein, gamma 3121689984616912309Rat
7581366Ccdc90b-ps1coiled-coil domain containing 90B, pseudogene 1121690674816908225Rat
2187Azgp1alpha-2-glycoprotein 1, zinc-binding121693099016939333Rat
41111819Rpl34-ps3ribosomal protein L34, pseudogene 3121696413416964559Rat
1560616Zkscan1zinc finger with KRAB and SCAN domains 1121696628716987680Rat
9368177Elocl1elongin C like 1121698971716991140Rat
1309981Zscan21zinc finger and SCAN domain containing 21121699849617024167Rat
9205257LOC103691091NHP2-like protein 1 pseudogene121701804017019347Rat
6489147Zfp113zinc finger protein 3121702210417033776Rat
1309919Cops6COP9 signalosome subunit 6121703897917041818Rat
1303018Mcm7minichromosome maintenance complex component 7121704220717049470Rat
2325594Mir25microRNA 25121704293217043015Rat
2325459Mir93microRNA 93121704313517043221Rat
2325388Mir106bmicroRNA 106b121704334417043425Rat
1310233Ap4m1adaptor related protein complex 4 subunit mu 1121704976617055954Rat
1311608Taf6TATA-box binding protein associated factor 6121705586417064244Rat
1307636Cnpy4canopy FGF signaling regulator 4121706464217070755Rat
1306932Mblac1metallo-beta-lactamase domain containing 1121707146517072736Rat
1588255Nxpe5neurexophilin and PC-esterase domain family, member 5121709762417119700Rat
1587058Nxpe5l2neurexophilin and PC-esterase domain family, member 5 like 2121712410417142519Rat
1587046Ptmal2prothymosin alpha like 2121715294917153791Rat
7675853LOC102551138uncharacterized LOC102551138121717846417200736Rat
1559954Nxpe5l1neurexophilin and PC-esterase domain family, member 5-like 1121718656617196784Rat
41070362LOC120095896NXPE family member 3-like121720844017225545Rat
1562319Nxpe5l3neurexophilin and PC-esterase domain family, member 5 like 3121723831117252723Rat
1309735Lamtor4late endosomal/lysosomal adaptor, MAPK and MTOR activator 4121725865617262478Rat
1305455Trappc14trafficking protein particle complex subunit 14121726274817267093Rat
1561105Gal3st4galactose-3-O-sulfotransferase 4121726796317276951Rat
621363Gpc2glypican 2121727787517284297Rat
621333Stag3STAG3 cohesin complex component121728467717314936Rat
1585866PvrigPVR related immunoglobulin domain containing121736372117365577Rat
1559588Pilrb2l4paired immunoglobin like type 2 receptor beta 2 like 4121739884417404810Rat
1562930Vom2r61vomeronasal 2 receptor, 61121743891117465634Rat
1598200Vom2r62vomeronasal 2 receptor, 62121752466217542226Rat
11466946Vmn2r116l-ps4vomeronasal 2, receptor 116 like, pseudogene 4121758263517615711Rat
1564022Vom2r63vomeronasal 2 receptor, 63121762514117652806Rat
1562525Pilrb2l5paired immunoglobin like type 2 receptor beta 2 like 5121767486017682715Rat
1566006Pilrb2l1paired immunoglobin like type 2 receptor beta 2 like 1121772021317732681Rat
41122052Rap1b-ps1RAP1B, member of RAS oncogene family, pseudogene 1121773295517734674Rat
40977068Pilrb2l8paired immunoglobin like type 2 receptor beta 2 like 8121774431517756074Rat
41102335Rap1b-ps2RAP1B, member of RAS oncogene family, pseudogene 2121775685017757928Rat
1561143Pilrb2paired immunoglobin like type 2 receptor beta 2121777304717779527Rat
6497409Pilrapaired immunoglobin-like type 2 receptor alpha121778716917798149Rat
6497217Zcwpw1l1zinc finger CW-type and PWWP domain containing 1-like 1121779865017812208Rat
7553419Pilrb1l3paired immunoglobin-like type 2 receptor beta 1 like 3121782366217828030Rat
1598199Vom2r-ps104vomeronasal 2 receptor, pseudogene 104121786250917880232Rat
41389804Vmn2r116l-ps7vomeronasal 2, receptor 116 like, pseudogene 7121790355317929309Rat
41145634Vmn2r116l-ps10vomeronasal 2, receptor 116 like, pseudogene 10121794226217956785Rat
1641975Vom2r-ps107vomeronasal 2 receptor, pseudogene 107121801328818014187Rat
41105168Vmn2r116l-ps11vomeronasal 2, receptor 116 like, pseudogene 11121803529818043422Rat
1583509Pilrb1l1paired immunoglobin-like type 2 receptor beta 1 like 1121808141018089619Rat
1561730Pilrb2l3paired immunoglobin like type 2 receptor beta 2 like 3121821053518216471Rat
41017732Trnag-acc1transfer RNA glycine (anticodon ACC) 1121822243818222512Rat
41111820Pilrb1l4paired immunoglobin-like type 2 receptor beta 1 like 4121822248018237114Rat
1559499Pilrb-ps7paired immunoglobin-like type 2 receptor beta, pseudogene 7121825144218257788Rat
1626043Vom2r-ps103vomeronasal 2 receptor, pseudogene 103121829031018300323Rat
41201467Vmn2r116l-ps8vomeronasal 2, receptor 116 like, pseudogene 8121831329718350370Rat
1626049Vom2r-ps101vomeronasal 2 receptor, pseudogene 101121837651218387463Rat
1584665Vom2r64vomeronasal 2 receptor, 64121841940918449218Rat
1625996Vom2r-ps100vomeronasal 2 receptor, pseudogene 100121846688518480996Rat
1584675Pilrb1paired immunoglobin-like type 2 receptor beta 1121851616118525375Rat
1563400Pilrb2l2paired immunoglobin like type 2 receptor beta 2 like 2121856684118580286Rat
6496729Pilrb-ps1paired immunoglobin-like type 2 receptor beta, pseudogene 1121860115618607655Rat
1560262Pilrb-ps6paired immunoglobin-like type 2 receptor beta, pseudogene 6121860905518630916Rat
41169192LOC120095853uncharacterized LOC120095853121865363018661701Rat
40963637Pilrb-ps4paired immunoglobin-like type 2 receptor beta, pseudogene 4121870450918710373Rat
41202788LOC120095904uncharacterized LOC120095904121872580418728687Rat
11492645Pilrb-ps2paired immunoglobin-like type 2 receptor beta, pseudogene 2121877185018777708Rat
1597726Pilrbl1paired immunoglobin-like type 2 receptor beta like 1121879284018799391Rat
40942766Pilrb-ps3paired immunoglobin-like type 2 receptor beta, pseudogene 3121880167318811757Rat
7556717Pilrb1l2paired immunoglobin-like type 2 receptor beta 1 like 2121881408518837515Rat
9261510LOC103693637ras-related protein Rap-1b pseudogene121882114618821924Rat
41314880Rap1b-ps3RAP1B, member of RAS oncogene family, pseudogene 3121883809818839898Rat
41173580Pilrb2l7paired immunoglobin like type 2 receptor beta 2 like 7121885345218861001Rat
6498401LOC100910497paired immunoglobulin-like type 2 receptor alpha-like121886630118881290Rat
1305405Zcwpw1zinc finger CW-type and PWWP domain containing 1121888062518910713Rat
1560550Mepcemethylphosphate capping enzyme121891179618916515Rat
1584367Ppp1r35protein phosphatase 1, regulatory subunit 35121891590918919253Rat
11442159Spacdrsperm acrosome developmental regulator121893060818936787Rat
1584380Tsc22d4TSC22 domain family, member 4121893915018952008Rat
1310964Nyap1neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1121895619218967624Rat
1591278Echdc2-ps1enoyl CoA hydratase domain containing 2, pseudogene 1121898935318992172Rat
1306590Agfg2ArfGAP with FG repeats 2121901222819048433Rat
69317Irs3insulin receptor substrate 3121905314819055286Rat
1562406Sap25Sin3A-associated protein 25121905576219057425Rat
1306145Lrch4leucine rich repeats and calponin homology domain containing 4121905758219072573Rat
1305095Fbxo24F-box protein 24121907266819083067Rat
3270Pcolceprocollagen C-endopeptidase enhancer121908419119090508Rat
1304973Mospd3motile sperm domain containing 3121909520319100303Rat
1310152Tfr2transferrin receptor 2121910767319124622Rat
1307763Actl6bactin-like 6B121912488719141419Rat
69319Gnb2G protein subunit beta 2121915900219164021Rat
1309933Gigyf1GRB10 interacting GYF protein 1121916607019181570Rat
1306413Pop7POP7 homolog, ribonuclease P/MRP subunit121918938419190425Rat
2559Epoerythropoietin121920425819207948Rat
1305044Zanzonadhesin121921501819322789Rat
1583193Ephb4EPH receptor B4121932641119351667Rat
9263674LOC103691283uncharacterized LOC103691283121936730619368987Rat
620747Slc12a9solute carrier family 12, member 9121936899019385881Rat
1583180Trip6thyroid hormone receptor interactor 6121938621219390619Rat
1591241Srrtserrate, RNA effector molecule121939257819406098Rat
7536909Ufsp1UFM1-specific peptidase 1121940613319407147Rat
69313Acheacetylcholinesterase121940613319413713Rat
41199718LOC120095907uncharacterized LOC120095907121941722819420134Rat
40994669LOC120095953mucin-3A-like121943221419442687Rat
6485223Muc3amucin 3A, cell surface associated121945067919454753Rat
41045133Muc3l1mucin 3 like 1121945578319462165Rat
40984024LOC120095955mucin-12-like121948604119493995Rat
3124Muc17mucin 17, cell surface associated121952725119536924Rat
40958426Trim56tripartite motif containing 56121954491319567324Rat
41120780LOC120095911uncharacterized LOC120095911121954803519556511Rat
3249Serpine1serpin family E member 1121960127219611657Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11051D12Mit2217121961087019611091Ratregion
11052D12Wox11200121961088619611090Ratregion
11053D12Wox12202121961088919611095Ratregion
33911D12Mit6139121235161912351758Ratregion
33961D12Mit5133121235161912351752Ratregion
33725D12Mit1241121502494215025183Ratregion
36221D12Rat4292121238654912386833Ratregion
37272D12Rat28126121580606515806191Ratregion
37318D12Rat29167121731067817310845Ratregion
37478D12Rat43253121107382511074078Ratregion
35501D12Rat21671293182169318387Ratregion
35523D12Rat58159129160591764Ratregion
34801D12Rat3152121181215911812311Ratregion
39744D12Rat591891239069693907152Ratregion
39814D12Rat5711812797729797847Ratregion
39886D12Rat65197121144446611444665Ratregion
38052D12Rat37173121037299310373166Ratregion
38094D12Rat47210121507055115070761Ratregion
40408D12Rat91160121587265315872803Ratregion
40232D12Rat561651212478641248029Ratregion
38952D12Rat401101271967307196840Ratregion
38952D12Rat401101271967307196840Ratregion
39026D12Rat34213121106751711067730Ratregion
39330D12Rat39231121290184612902077Ratregion
41956D12Arb132321268331906833424Ratregion
41960D12Arb21701285254238525593Ratregion
41414D12Rat63172121000902810009200Ratregion
42960D12Rat9022512116519116744Ratregion
40838D12Rat622171298777889877995Ratregion
40942D12Rat60174121003653010036704Ratregion
41054D12Rat61176121023185410232030Ratregion
43361D1Got180156121109377711093812Ratregion
44055D6Got301181284495168450901Ratregion
44923D12Got12271250553765055605Ratregion
44925D12Got91481255217325521880Ratregion
44926D12Got81441267498796750023Ratregion
44928D12Got61861254330245433143Ratregion
44929D12Got41451274199747420119Ratregion
44930D12Got51531268427256842878Ratregion
44933D12Got122581290680279068285Ratregion
44934D12Got73001258359675836267Ratregion
44935D12Got1012041295268829527086Ratregion
44936D12Got102031282983078298623Ratregion
44936D12Got102031282984208298623Ratregion
44937D12Got13295121039569510395989Ratregion
44938D12Got111561284494908449646Ratregion
44939D12Got14192121035540310355595Ratregion
44940D12Got15270121080911110809378Ratregion
44941D12Got21274121095792810958202Ratregion
44942D12Got18172121008692310087097Ratregion
44944D12Got17131121098458710984718Ratregion
44947D12Got25127121216883812168962Ratregion
44948D12Got20234121091241010912644Ratregion
44949D12Got24145121221818412218331Ratregion
44950D12Wox5135121363552313635658Ratregion
44951D12Got26220121281017712810397Ratregion
44952D12Got27156121343671213436870Ratregion
44954D12Got29279121392476113925040Ratregion
44956D12Got30158121446396714464125Ratregion
44959D12Got34207121690215316902360Ratregion
44960D12Got35142121709872117098867Ratregion
44962D12Got36135121637919316379328Ratregion
44963D12Got32176121709874417098921Ratregion
44968D12Got39155121958899819589153Ratregion
60756D12Wox3961294541359454231Ratregion
60757D12Wox62231255312025531425Ratregion
625806D12Got19133121171290011713033Ratregion
62471D2Uia1266121531710015317367Ratregion
629605D12Hmgc1171121693293516933106Ratregion
67355D12Arb121691211968391197008Ratregion
1630072D12Wox213161267012776701595Ratregion
1630995D12Got2181271214723331472460Ratregion
1631234D12Wox282091211968481197057Ratregion
1628028D12Got2221301220522282052358Ratregion
1628808D12Got207275121011549810115773Ratregion
1638964D12Got23111121265868012658791Ratregion
1639481D12Got22827512873832874107Ratregion
1641769D12Wox20288121042238110422669Ratregion
1633212D12Wox262231212015551201778Ratregion
1633534D12Wox29101121042600010426267Ratregion
1633534D12Wox29101121042616410426267Ratregion
1639781D12Got22698121885849018858588Ratregion
1639855D12Got2272281248588204859048Ratregion
1634940D12Got2211481238437653843913Ratregion
1635936D12Wox19156121042327310423429Ratregion
1638478D12Got2042591217542261754485Ratregion
1632450D12Got2051461218239081824054Ratregion
1634822D12Got2061601266842106684370Ratregion
7205870PMC85795P4500121166435411665320Ratregion
5035789PMC180915P1362121166505411665416Ratregion
5035831PMC20960P1346121166562111665967Ratregion
5035841PMC224995P1585121166504811665633Ratregion
5035851PMC23951P1565121166510011665665Ratregion
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5499615MARC_2660-2661:991933047:1307121882122918821524Ratregion
5499615MARC_2660-2661:991933047:1307121883832518838621Ratregion
5499659MARC_6763-6764:992007406:11251276163287616453Ratregion
5500967PMC102052P1574121166544211666016Ratregion
5500977PMC107891P1980121166434111665321Ratregion
5501001PMC115141P1318121166504711665365Ratregion
5501011PMC117352P1160121166433611664496Ratregion
5501013PMC117780P1465121166516311665718Ratregion
5501091PMC133998P8537121166440311665406Ratregion
5501387Mafk588121483465614835244Ratregion
5499901UniSTS:235351167121411079914110966Ratregion
5499903UniSTS:2353622031293588549359057Ratregion
5499895UniSTS:235349192121539658615396778Ratregion
5499905UniSTS:235357128121125994511260073Ratregion
5499907UniSTS:2353742171258248285825045Ratregion
5502357RH124577138121071048010710618Ratregion
5500535RH135895139121035996310360102Ratregion
5501017PMC122924P2992121166413211665124Ratregion
5500551RH135954170121472489314725063Ratregion
5503556UniSTS:463940304121941027519410579Ratregion
5501175PMC15197P3506121960956619610072Ratregion
5501273PMC187403P1220121166512111665341Ratregion
5504454PMC21071P1409121166561611666025Ratregion
5504688PMC37512P3250121166507111665321Ratregion
5504730PMC86032P2910121166441411665324Ratregion
5504780PMC99880P2318121166505011665368Ratregion
5504789UniSTS:2741821383121483659514837978Ratregion
5505116LOC783396150121581353015813680Ratregion
5501693LOC345651130121166447011665066Ratregion
5501724UniSTS:266994207121932685119327058Ratregion
5501648UniSTS:26548815561276818907683447Ratregion
5506600Flt101274464277448109Ratregion
5502066MARC_26575-26576:1033748265:10121909595319096548Ratregion
5502126MARC_5081-5082:996690120:1683121912715019127833Ratregion
5502295RH1243081461288253138825459Ratregion
5502686Tmem184a664121482930314829966Ratregion
5502307RH124339154121698989516990049Ratregion
5502307RH124339154121698989516990049Ratregion
5502898Lmtk21032121042702310428055Ratregion
Position Markers

Peak: (D12Arb14)
Rat AssemblyChrPosition (strand)Source
GRCr81215,584,732 - 15,584,977 (+)Marker Load Pipeline
Rnor_5.01214,503,898 - 14,504,144NCBI
RGSC_v3.41210,798,950 - 10,799,195RGD
RGSC_v3.11210,828,878 - 10,829,123RGD
SHRSP x BN Map1212.67UniSTS
SHRSP x BN Map1212.67RGD
Cytogenetic Map12 RGD
Flank 2: (D12Wox11)
Rat AssemblyChrPosition (strand)Source
GRCr81225,247,590 - 25,247,790 (+)Marker Load Pipeline
mRatBN7.21219,610,886 - 19,611,090 (+)MAPPER
Rnor_6.01222,650,718 - 22,650,917NCBI
Rnor_5.01224,662,999 - 24,663,198UniSTS
RGSC_v3.41220,932,560 - 20,932,760RGD
RGSC_v3.41220,932,561 - 20,932,760UniSTS
RGSC_v3.11220,922,172 - 20,922,372RGD
Celera1221,386,646 - 21,386,845UniSTS
RH 3.4 Map12277.7RGD
RH 3.4 Map12277.7UniSTS
RH 2.0 Map12206.8RGD
Cytogenetic Map12q11-q12UniSTS


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)121914436246669029Rat
61443Btemp2Thermal response to stress QTL 23.30.000094body temperature trait (VT:0005535)core body temperature (CMO:0001036)121502518320794014Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)121961087046669029Rat
1331739Hrtrt14Heart rate QTL 143.56232heart pumping trait (VT:2000009)heart rate (CMO:0000002)12931821612829686Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
737822Alc10Alcohol consumption QTL 102.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)121961087040218516Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)121587265332974238Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123297788Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12134851688Rat
1600391Edcs2Endometrial carcinoma susceptibility QTL23.50.01uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)12683319017870186Rat
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12122591684Rat
724526Uae3Urinary albumin excretion QTL 34.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)12390696910373166Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382545055165Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
1300157Rf21Renal function QTL 214.4renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)12931821632103380Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961088935682913Rat
7243862Mcs30Mammary carcinoma susceptibility QTL 308.62mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)127977298525593Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121047413746669029Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
1331755Bp219Blood pressure QTL 2193.041arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382528064557Rat
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
2306789Ean6Experimental allergic neuritis QTL 64.9nervous system integrity trait (VT:0010566)experimental autoimmune neuritis severity score (CMO:0001528)121961087024139202Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961087042828880Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101318273646669029Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121319815746669029Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
1549902Bp269Blood pressure QTL 269arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121318273646669029Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121235161946669029Rat
1300174Bw15Body weight QTL 152.93body mass (VT:0001259)body weight loss (CMO:0001399)1219318387Rat
1331786Kidm11Kidney mass QTL 113.571kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)121107382524234895Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121047413746669029Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
61416Pia4Pristane induced arthritis QTL 48.4joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)121363552330827399Rat
7204484Bp358Blood pressure QTL 3580.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121300829619212979Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12136247923Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121363552335682913Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121281238546669029Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12844949028302290Rat
631543Bp83Blood pressure QTL 835.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121555082638478808Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 63 females 2312387
qtl_general allele: WKY allele contributes to nephritis 2312387
qtl_general measurement method: 8 wk old animals were injected once with anti-GBM monoclonal antibody, b35; body weight and kidney weights were taken after 8 days and kidney weight index was calculated (percentage of kidney wt/body wt) 2312387
qtl_general inducing agent: nephritogenic antigen anti-GBM monoclonal antibody, b35 2312387
qtl_general software used: Map Maker QTX20b; phenotypic comparisons by student's t-test or ANOVA 2312387