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Gene: Zbed5 (zinc finger, BED-type containing 5) Rattus norvegicus
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Symbol: Zbed5
Name: zinc finger, BED-type containing 5
Description: Predicted to localize to the nucleoplasm. Orthologous to several human genes including ZBED8 (zinc finger BED-type containing 8); INTERACTS WITH (RS)-amphetamine; 6-propyl-2-thiouracil; bis(2-ethylhexyl) phthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: coiled-coil-helix-coiled-coil-helix domain-containing protein 2; coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial; LOC288622; RGD1559988; SCAN domain containing 3; Scand3; similar to RIKEN cDNA 2410018M08; zinc finger BED domain-containing protein 5
Orthologs:
Homo sapiens (human) : ZBED5 (zinc finger BED-type containing 5)  HGNC  Alliance
Mus musculus (house mouse) : Zbed5 (zinc finger, BED type containing 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Zbed8 (zinc finger BED-type containing 8)
Pan paniscus (bonobo/pygmy chimpanzee) : ZBED8 (zinc finger BED-type containing 8)
Canis lupus familiaris (dog) : ZBED8 (zinc finger BED-type containing 8)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Zbed5 (zinc finger BED-type containing 5)
Sus scrofa (pig) : ZBED5 (zinc finger BED-type containing 5)
more info ...
Related Pseudogenes: Scand3-ps1   Scand3-ps2   Scand3-ps3   Scand3-ps4  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01230,308,469 - 30,314,520 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01232,253,295 - 32,259,362 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41227,855,832 - 27,861,887 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1228,521,413 - 28,527,467 (-)NCBICelera
Cytogenetic Map12q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Zbed5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1559988
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.