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Gene: Brat1 (BRCA1-associated ATM activator 1) Rattus norvegicus
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Symbol: Brat1
Name: BRCA1-associated ATM activator 1
Description: Predicted to be involved in several processes, including glucose metabolic process; positive regulation of cell growth; and response to ionizing radiation. Predicted to localize to the cytoplasm and nucleoplasm. Orthologous to human BRAT1 (BRCA1 associated ATM activator 1); INTERACTS WITH bisphenol A; dibutyl phthalate; 7,12-dimethyltetraphene (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: Brat1-ps1; BRCA1-associated ATM activator 1, pseudogene 1; LOC498150; RGD1565146; similar to hypothetical gene supported by AF226663
Orthologs:
Homo sapiens (human) : BRAT1 (BRCA1 associated ATM activator 1)  HGNC  Alliance
Mus musculus (house mouse) : Brat1 (BRCA1-associated ATM activator 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Brat1 (BRCA1 associated ATM activator 1)
Pan paniscus (bonobo/pygmy chimpanzee) : BRAT1 (BRCA1 associated ATM activator 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Brat1 (BRCA1 associated ATM activator 1)
Sus scrofa (pig) : BRAT1 (BRCA1 associated ATM activator 1)
Chlorocebus sabaeus (green monkey) : BRAT1 (BRCA1 associated ATM activator 1)
Heterocephalus glaber (naked mole-rat) : Brat1 (BRCA1 associated ATM activator 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01216,016,062 - 16,028,534 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1216,015,771 - 16,027,881 (-)Ensembl
Rnor_5.01218,013,619 - 18,036,360 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41214,400,221 - 14,411,251 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1215,689,050 - 15,701,522 (-)NCBICelera
Cytogenetic Map12q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Brat1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565146
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.