Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Galnt17 (polypeptide N-acetylgalactosaminyltransferase 17) Rattus norvegicus
Analyze
Symbol: Galnt17
Name: polypeptide N-acetylgalactosaminyltransferase 17
RGD ID: 1563452
Description: Predicted to have carbohydrate binding activity. Predicted to localize to integral component of membrane. Orthologous to human GALNT17 (polypeptide N-acetylgalactosaminyltransferase 17); PARTICIPATES IN O-linked glycan biosynthetic pathway; INTERACTS WITH atrazine; bisphenol A; hexane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: pt-GalNAc-T; putative polypeptide N-acetylgalactosaminyltransferase-like protein 3; Wbscr17; Williams-Beuren syndrome chromosome region 17; Williams-Beuren syndrome chromosome region 17 homolog; Williams-Beuren syndrome chromosome region 17 homolog (human)
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01228,381,879 - 29,268,457 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1228,381,982 - 29,268,073 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01230,342,777 - 30,922,308 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01231,188,190 - 31,212,714 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41226,294,280 - 26,820,070 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1227,052,564 - 27,503,433 (+)NCBICelera
Cytogenetic Map12q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Galnt17
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563452
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.