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Gene: Col26a1 (collagen type XXVI alpha 1 chain) Rattus norvegicus
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Symbol: Col26a1
Name: collagen type XXVI alpha 1 chain
Description: Predicted to be involved in positive regulation of cell-substrate adhesion. Predicted to localize to the Golgi apparatus; endoplasmic reticulum; and extracellular matrix. Orthologous to human COL26A1 (collagen type XXVI alpha 1 chain); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; paracetamol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: collagen alpha-1(XXVI) chain; collagen, type XXVI, alpha 1; LOC685612; similar to Emu2; uncharacterized protein LOC685612
Orthologs:
Homo sapiens (human) : COL26A1 (collagen type XXVI alpha 1 chain)  HGNC  Alliance
Mus musculus (house mouse) : Col26a1 (collagen, type XXVI, alpha 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col26a1 (collagen type XXVI alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL26A1 (collagen type XXVI alpha 1 chain)
Canis lupus familiaris (dog) : COL26A1 (collagen type XXVI alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101964570 (uncharacterized LOC101964570)
Sus scrofa (pig) : COL26A1 (collagen type XXVI alpha 1 chain)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01222,834,866 - 22,980,603 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01224,843,986 - 24,983,449 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41221,027,254 - 21,048,440 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1221,567,842 - 21,711,232 (+)NCBICelera
Cytogenetic Map12q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Col26a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1591401
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.